RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 KLKP1Q107X0 134 aa8.28□□□□□ -1.08
PDLIM2-215ENST00000456545 A8MUN3 132 aa8.27□□□□□ -1.09
PDLIM2-215ENST00000456545 H3BPC8 53 aa8.25□□□□□ -1.09
PDLIM2-215ENST00000456545 K7ERU9 68 aa8.25□□□□□ -1.09
PDLIM2-215ENST00000456545 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.22□□□□□ -1.09
PDLIM2-215ENST00000456545 KRTAP19-6Q3LI70 58 aa8.22□□□□□ -1.09
PDLIM2-215ENST00000456545 IMUPQ9GZP8 106 aa8.21□□□□□ -1.1
PDLIM2-215ENST00000456545 FCGBPQ9Y6R7 5405 aaPredicted RBP8.19□□□□□ -1.1
PDLIM2-215ENST00000456545 MT-ATP8P03928 68 aa8.16□□□□□ -1.1
PDLIM2-215ENST00000456545 Q5VV11 94 aa8.13□□□□□ -1.11
PDLIM2-215ENST00000456545 SPRR2GQ9BYE4 73 aa8.13□□□□□ -1.11
PDLIM2-215ENST00000456545 CRIPTQ9P021 101 aa8.12□□□□□ -1.11
PDLIM2-215ENST00000456545 KRTAP9-7A8MTY7 169 aa8.11□□□□□ -1.11
PDLIM2-215ENST00000456545 SMIM20Q8N5G0 67 aa8.11□□□□□ -1.11
PDLIM2-215ENST00000456545 H0YAA0 97 aa8.08□□□□□ -1.12
PDLIM2-215ENST00000456545 TRAV7A0A075B6U4 112 aa8.07□□□□□ -1.12
PDLIM2-215ENST00000456545 ADM2Q7Z4H4 148 aa8.06□□□□□ -1.12
PDLIM2-215ENST00000456545 KRTAP19-8Q3LI54 63 aa8.04□□□□□ -1.12
PDLIM2-215ENST00000456545 DMAC1Q96GE9 116 aa8.04□□□□□ -1.12
PDLIM2-215ENST00000456545 MT1BP07438 61 aa8.02□□□□□ -1.13
PDLIM2-215ENST00000456545 A6NN06 94 aa7.98□□□□□ -1.13
PDLIM2-215ENST00000456545 ACYP2P14621 99 aa7.97□□□□□ -1.13
PDLIM2-215ENST00000456545 C20orf197Q8N268 126 aa7.93□□□□□ -1.14
PDLIM2-215ENST00000456545 SNURFQ9Y675 71 aa7.9□□□□□ -1.14
PDLIM2-215ENST00000456545 SPTSSBQ8NFR3 76 aa7.88□□□□□ -1.15
PDLIM2-215ENST00000456545 MACF1Q9UPN3 7388 aaKnown RBP7.88□□□□□ -1.15
PDLIM2-215ENST00000456545 R4GN34 69 aa7.87□□□□□ -1.15
PDLIM2-215ENST00000456545 CHKB-CPT1BH3BT56 60 aa7.86□□□□□ -1.15
PDLIM2-215ENST00000456545 P0C880 135 aa7.84□□□□□ -1.15
PDLIM2-215ENST00000456545 KRTAP10-5P60370 271 aa7.84□□□□□ -1.15
PDLIM2-215ENST00000456545 SERP2Q8N6R1 65 aa7.84□□□□□ -1.15
PDLIM2-215ENST00000456545 M0QZ58 72 aa7.8□□□□□ -1.16
PDLIM2-215ENST00000456545 PLAC4Q8WY50 150 aa7.79□□□□□ -1.16
PDLIM2-215ENST00000456545 SYNE2Q8WXH0 6885 aaKnown RBP7.76□□□□□ -1.17
PDLIM2-215ENST00000456545 KRTAP6-3Q3LI67 103 aa7.75□□□□□ -1.17
PDLIM2-215ENST00000456545 SPANXA2-OT1Q8N9U9 137 aa7.75□□□□□ -1.17
PDLIM2-215ENST00000456545 KRTAP3-2Q9BYR7 98 aa7.75□□□□□ -1.17
PDLIM2-215ENST00000456545 LINC01554Q52M75 96 aa7.72□□□□□ -1.17
PDLIM2-215ENST00000456545 PRO2289Q9P1D8 64 aa7.69□□□□□ -1.18
PDLIM2-215ENST00000456545 COX7CP15954 63 aa7.63□□□□□ -1.19
PDLIM2-215ENST00000456545 MT1XP80297 61 aa7.56□□□□□ -1.2
PDLIM2-215ENST00000456545 COA5Q86WW8 74 aa7.55□□□□□ -1.2
PDLIM2-215ENST00000456545 SEC61GP60059 68 aa7.48□□□□□ -1.21
PDLIM2-215ENST00000456545 ANAPC13Q9BS18 74 aa7.46□□□□□ -1.22
PDLIM2-215ENST00000456545 H7BZZ5 65 aa7.45□□□□□ -1.22
PDLIM2-215ENST00000456545 SERP1Q9Y6X1 66 aa7.45□□□□□ -1.22
PDLIM2-215ENST00000456545 CYSTM1Q9H1C7 97 aa7.41□□□□□ -1.22
PDLIM2-215ENST00000456545 KRTAP5-9P26371 169 aa7.4□□□□□ -1.22
PDLIM2-215ENST00000456545 KRTAP12-2P59991 146 aa7.36□□□□□ -1.23
PDLIM2-215ENST00000456545 KRTAP13-4Q3LI77 160 aa7.34□□□□□ -1.23
PDLIM2-215ENST00000456545 KRTAP8-1Q8IUC2 63 aa7.33□□□□□ -1.24
PDLIM2-215ENST00000456545 MUC12Q9UKN1 5478 aa7.31□□□□□ -1.24
PDLIM2-215ENST00000456545 SPRR2FQ96RM1 72 aa7.3□□□□□ -1.24
PDLIM2-215ENST00000456545 CAMK2N1Q7Z7J9 78 aa7.29□□□□□ -1.24
PDLIM2-215ENST00000456545 NEBP20929 6669 aa7.27□□□□□ -1.25
PDLIM2-215ENST00000456545 A0A1B0GU33 70 aa7.26□□□□□ -1.25
PDLIM2-215ENST00000456545 KMT2DO14686 5537 aa7.26□□□□□ -1.25
PDLIM2-215ENST00000456545 A0A0D9SG42 100 aa7.25□□□□□ -1.25
PDLIM2-215ENST00000456545 CCDC179H3BU77 68 aa7.25□□□□□ -1.25
PDLIM2-215ENST00000456545 KRTAP10-7P60409 375 aaPredicted RBP7.23□□□□□ -1.25
PDLIM2-215ENST00000456545 KRTAP4-8A0A0G2JLE6 195 aa7.22□□□□□ -1.25
PDLIM2-215ENST00000456545 SPATA8Q6RVD6 105 aa7.22□□□□□ -1.25
PDLIM2-215ENST00000456545 KRTAP4-8Q9BYQ9 185 aa7.22□□□□□ -1.25
PDLIM2-215ENST00000456545 A0A1B0GU69 56 aa7.21□□□□□ -1.26
PDLIM2-215ENST00000456545 KRTAP10-12P60413 245 aa7.19□□□□□ -1.26
PDLIM2-215ENST00000456545 SPRR2EP22531 72 aa7.17□□□□□ -1.26
PDLIM2-215ENST00000456545 SPRR2BP35325 72 aa7.17□□□□□ -1.26
PDLIM2-215ENST00000456545 SPRR2AP35326 72 aa7.17□□□□□ -1.26
PDLIM2-215ENST00000456545 ATP5EP56381 51 aaPredicted RBP7.17□□□□□ -1.26
PDLIM2-215ENST00000456545 SPINT4Q6UDR6 99 aa7.16□□□□□ -1.26
PDLIM2-215ENST00000456545 KRTAP20-1Q3LI63 56 aa7.15□□□□□ -1.26
PDLIM2-215ENST00000456545 MDN1Q9NU22 5596 aa7.12□□□□□ -1.27
PDLIM2-215ENST00000456545 SMIM26A0A096LP01 95 aa7.09□□□□□ -1.27
PDLIM2-215ENST00000456545 PRR15LQ9BU68 103 aa7.06□□□□□ -1.28
PDLIM2-215ENST00000456545 KRTAP12-1P59990 96 aa7.02□□□□□ -1.29
PDLIM2-215ENST00000456545 LCE1AQ5T7P2 110 aa7.02□□□□□ -1.29
PDLIM2-215ENST00000456545 TMEM258P61165 79 aa7.01□□□□□ -1.29
PDLIM2-215ENST00000456545 KRTAP2-3P0C7H8 128 aa7□□□□□ -1.29
PDLIM2-215ENST00000456545 KRTAP2-4Q9BYR9 128 aa7□□□□□ -1.29
PDLIM2-215ENST00000456545 A8MU10 97 aa6.96□□□□□ -1.3
PDLIM2-215ENST00000456545 LINC01558Q9Y6Z2 57 aa6.94□□□□□ -1.3
PDLIM2-215ENST00000456545 SPRR2DP22532 72 aa6.93□□□□□ -1.3
PDLIM2-215ENST00000456545 UQCR11O14957 56 aa6.8□□□□□ -1.32
PDLIM2-215ENST00000456545 KRTAP2-2Q9BYT5 123 aa6.79□□□□□ -1.32
PDLIM2-215ENST00000456545 KRTAP2-1Q9BYU5 128 aa6.79□□□□□ -1.32
PDLIM2-215ENST00000456545 TNP1P09430 55 aa6.74□□□□□ -1.33
PDLIM2-215ENST00000456545 KRTAP19-7Q3SYF9 63 aa6.74□□□□□ -1.33
PDLIM2-215ENST00000456545 LCE3BQ5TA77 95 aa6.72□□□□□ -1.33
PDLIM2-215ENST00000456545 C10orf95Q9H7T3 257 aa6.7□□□□□ -1.34
PDLIM2-215ENST00000456545 MT1EP04732 61 aa6.69□□□□□ -1.34
PDLIM2-215ENST00000456545 PCP4P48539 62 aa6.68□□□□□ -1.34
PDLIM2-215ENST00000456545 V9GYY9 64 aa6.67□□□□□ -1.34
PDLIM2-215ENST00000456545 KRTAP19-5Q3LI72 72 aa6.66□□□□□ -1.34
PDLIM2-215ENST00000456545 MIR22HGQ0VDD5 57 aa6.65□□□□□ -1.34
PDLIM2-215ENST00000456545 KRTAP19-3Q7Z4W3 81 aa6.63□□□□□ -1.35
PDLIM2-215ENST00000456545 PSPHP1O15172 72 aa6.6□□□□□ -1.35
PDLIM2-215ENST00000456545 LCE5AQ5TCM9 118 aa6.6□□□□□ -1.35
PDLIM2-215ENST00000456545 K7ERS5 55 aa6.58□□□□□ -1.36
PDLIM2-215ENST00000456545 LCE3AQ5TA76 89 aa6.58□□□□□ -1.36
PDLIM2-215ENST00000456545 Q1T7F1 81 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 446.5 ms