RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 KRTAP10-4P60372 401 aaPredicted RBP8.93□□□□□ -0.98
SCUBE2-202ENST00000450649 DYNC1H1Q14204 4646 aaKnown RBP8.91□□□□□ -0.98
SCUBE2-202ENST00000450649 APOBP04114 4563 aaKnown RBP8.87□□□□□ -0.99
SCUBE2-202ENST00000450649 C10orf95Q9H7T3 257 aa8.87□□□□□ -0.99
SCUBE2-202ENST00000450649 KRTAP3-3Q9BYR6 98 aa8.86□□□□□ -0.99
SCUBE2-202ENST00000450649 A0A1B0GVY2 172 aa8.84□□□□□ -0.99
SCUBE2-202ENST00000450649 KRTAP3-2Q9BYR7 98 aa8.84□□□□□ -0.99
SCUBE2-202ENST00000450649 MYCBP2O75592 4640 aa8.81□□□□□ -1
SCUBE2-202ENST00000450649 KRTAP15-1Q3LI76 137 aa8.77□□□□□ -1
SCUBE2-202ENST00000450649 NDUFAF8A1L188 74 aa8.77□□□□□ -1.01
SCUBE2-202ENST00000450649 S4R3F8 94 aa8.73□□□□□ -1.01
SCUBE2-202ENST00000450649 LRP1Q07954 4544 aaKnown RBP8.72□□□□□ -1.01
SCUBE2-202ENST00000450649 KRTAP12-2P59991 146 aa8.69□□□□□ -1.02
SCUBE2-202ENST00000450649 KRTAP21-3Q3LHN1 58 aa8.66□□□□□ -1.02
SCUBE2-202ENST00000450649 KRTAP10-8P60410 259 aa8.64□□□□□ -1.03
SCUBE2-202ENST00000450649 FAT3Q8TDW7 4589 aa8.63□□□□□ -1.03
SCUBE2-202ENST00000450649 KMT2CQ8NEZ4 4911 aaKnown RBP8.59□□□□□ -1.03
SCUBE2-202ENST00000450649 KRTAP12-1P59990 96 aa8.58□□□□□ -1.04
SCUBE2-202ENST00000450649 TNXBP22105 4242 aa8.56□□□□□ -1.04
SCUBE2-202ENST00000450649 XP32Q5T750 250 aa8.54□□□□□ -1.04
SCUBE2-202ENST00000450649 HSPG2P98160 4391 aa8.52□□□□□ -1.05
SCUBE2-202ENST00000450649 RYR2Q92736 4967 aa8.51□□□□□ -1.05
SCUBE2-202ENST00000450649 Q5VSD8 79 aa8.44□□□□□ -1.06
SCUBE2-202ENST00000450649 LPAP08519 4548 aa8.43□□□□□ -1.06
SCUBE2-202ENST00000450649 M0QZ58 72 aa8.38□□□□□ -1.07
SCUBE2-202ENST00000450649 KIAA1109Q2LD37 5005 aa8.29□□□□□ -1.08
SCUBE2-202ENST00000450649 MT1HL1P0DM35 61 aa8.27□□□□□ -1.09
SCUBE2-202ENST00000450649 LRP2P98164 4655 aa8.25□□□□□ -1.09
SCUBE2-202ENST00000450649 KRTAP17-1Q9BYP8 105 aa8.24□□□□□ -1.09
SCUBE2-202ENST00000450649 RYR1P21817 5038 aa8.23□□□□□ -1.09
SCUBE2-202ENST00000450649 RYR3Q15413 4870 aa8.19□□□□□ -1.1
SCUBE2-202ENST00000450649 PLAC4Q8WY50 150 aa8.18□□□□□ -1.1
SCUBE2-202ENST00000450649 R4GN34 69 aa8.11□□□□□ -1.11
SCUBE2-202ENST00000450649 ABCA13Q86UQ4 5058 aa8.09□□□□□ -1.12
SCUBE2-202ENST00000450649 A0A0A0MQY5 61 aa8.05□□□□□ -1.12
SCUBE2-202ENST00000450649 LUZP6Q538Z0 58 aa8.03□□□□□ -1.12
SCUBE2-202ENST00000450649 EPPK1P58107 5090 aaKnown RBP7.97□□□□□ -1.13
SCUBE2-202ENST00000450649 LORP23490 312 aaPredicted RBP7.96□□□□□ -1.14
SCUBE2-202ENST00000450649 MUC2Q02817 5179 aa7.94□□□□□ -1.14
SCUBE2-202ENST00000450649 PP632Q6XCG6 107 aa7.85□□□□□ -1.15
SCUBE2-202ENST00000450649 SEC61BP60468 96 aaKnown RBP7.85□□□□□ -1.15
SCUBE2-202ENST00000450649 KRTAP4-5Q9BYR2 181 aa7.8□□□□□ -1.16
SCUBE2-202ENST00000450649 MUC17Q685J3 4493 aa7.77□□□□□ -1.17
SCUBE2-202ENST00000450649 CAMK2N1Q7Z7J9 78 aa7.76□□□□□ -1.17
SCUBE2-202ENST00000450649 KRTAP4-1Q9BYQ7 146 aa7.73□□□□□ -1.17
SCUBE2-202ENST00000450649 KRTAP19-2Q3LHN2 52 aa7.65□□□□□ -1.18
SCUBE2-202ENST00000450649 J3QL48 77 aa7.54□□□□□ -1.2
SCUBE2-202ENST00000450649 SPRR5A0A1B0GTR4 108 aa7.51□□□□□ -1.21
SCUBE2-202ENST00000450649 TNP1P09430 55 aa7.51□□□□□ -1.21
SCUBE2-202ENST00000450649 FAT4Q6V0I7 4981 aa7.5□□□□□ -1.21
SCUBE2-202ENST00000450649 HERC2O95714 4834 aa7.48□□□□□ -1.21
SCUBE2-202ENST00000450649 KRTAP23-1A1A580 65 aa7.45□□□□□ -1.22
SCUBE2-202ENST00000450649 HERC1Q15751 4861 aa7.4□□□□□ -1.23
SCUBE2-202ENST00000450649 FLGP20930 4061 aaPredicted RBP7.38□□□□□ -1.23
SCUBE2-202ENST00000450649 PCLOQ9Y6V0 5065 aa7.36□□□□□ -1.23
SCUBE2-202ENST00000450649 RNF213Q63HN8 5207 aa7.34□□□□□ -1.23
SCUBE2-202ENST00000450649 BIRC6Q9NR09 4857 aa7.28□□□□□ -1.24
SCUBE2-202ENST00000450649 PRO2289Q9P1D8 64 aa7.12□□□□□ -1.27
SCUBE2-202ENST00000450649 SPRR2GQ9BYE4 73 aa7.12□□□□□ -1.27
SCUBE2-202ENST00000450649 LCE2CQ5TA81 110 aa7.11□□□□□ -1.27
SCUBE2-202ENST00000450649 LCE3AQ5TA76 89 aa7.08□□□□□ -1.28
SCUBE2-202ENST00000450649 HMCN2Q8NDA2 5059 aa7.06□□□□□ -1.28
SCUBE2-202ENST00000450649 KRTAP19-1Q8IUB9 90 aa7.06□□□□□ -1.28
SCUBE2-202ENST00000450649 UBR4Q5T4S7 5183 aa7.06□□□□□ -1.28
SCUBE2-202ENST00000450649 M0R2T5 61 aa7□□□□□ -1.29
SCUBE2-202ENST00000450649 INE1O15225 51 aa6.97□□□□□ -1.29
SCUBE2-202ENST00000450649 MT1HP80294 61 aa6.89□□□□□ -1.31
SCUBE2-202ENST00000450649 KRTAP8-1Q8IUC2 63 aa6.87□□□□□ -1.31
SCUBE2-202ENST00000450649 MT2AP02795 61 aa6.83□□□□□ -1.32
SCUBE2-202ENST00000450649 MT1FP04733 61 aa6.83□□□□□ -1.32
SCUBE2-202ENST00000450649 KRTAP10-10P60014 251 aa6.82□□□□□ -1.32
SCUBE2-202ENST00000450649 KRTAP9-8Q9BYQ0 159 aa6.78□□□□□ -1.32
SCUBE2-202ENST00000450649 KRTAP19-8Q3LI54 63 aa6.77□□□□□ -1.33
SCUBE2-202ENST00000450649 KRTAP12-3P60328 96 aa6.71□□□□□ -1.34
SCUBE2-202ENST00000450649 USH2AO75445 5202 aa6.7□□□□□ -1.34
SCUBE2-202ENST00000450649 MT1BP07438 61 aa6.66□□□□□ -1.34
SCUBE2-202ENST00000450649 KRTAP10-5P60370 271 aa6.66□□□□□ -1.34
SCUBE2-202ENST00000450649 KRTAP10-12P60413 245 aa6.65□□□□□ -1.34
SCUBE2-202ENST00000450649 MT1XP80297 61 aa6.65□□□□□ -1.35
SCUBE2-202ENST00000450649 KMT2DO14686 5537 aa6.62□□□□□ -1.35
SCUBE2-202ENST00000450649 KRTAP10-7P60409 375 aaPredicted RBP6.49□□□□□ -1.37
SCUBE2-202ENST00000450649 KRTAP9-3Q9BYQ3 159 aa6.49□□□□□ -1.37
SCUBE2-202ENST00000450649 FSIP2Q5CZC0 6907 aa6.36□□□□□ -1.39
SCUBE2-202ENST00000450649 LCE3CQ5T5A8 94 aa6.34□□□□□ -1.39
SCUBE2-202ENST00000450649 KRTAP19-5Q3LI72 72 aa6.29□□□□□ -1.4
SCUBE2-202ENST00000450649 KRTAP9-6A8MVA2 160 aa6.19□□□□□ -1.42
SCUBE2-202ENST00000450649 LCE2BO14633 110 aa6.19□□□□□ -1.42
SCUBE2-202ENST00000450649 KRTAP4-8A0A0G2JLE6 195 aa6.1□□□□□ -1.43
SCUBE2-202ENST00000450649 KRTAP4-8Q9BYQ9 185 aa6.1□□□□□ -1.43
SCUBE2-202ENST00000450649 KRTAP2-3P0C7H8 128 aa6.09□□□□□ -1.43
SCUBE2-202ENST00000450649 KRTAP2-4Q9BYR9 128 aa6.09□□□□□ -1.43
SCUBE2-202ENST00000450649 KRTAP2-1Q9BYU5 128 aa6.09□□□□□ -1.43
SCUBE2-202ENST00000450649 KRTAP4-7Q9BYR0 210 aa5.98□□□□□ -1.45
SCUBE2-202ENST00000450649 LCE2AQ5TA79 106 aaPredicted RBP5.96□□□□□ -1.46
SCUBE2-202ENST00000450649 KRTAP19-7Q3SYF9 63 aa5.93□□□□□ -1.46
SCUBE2-202ENST00000450649 DSTQ03001 7570 aaKnown RBP5.89□□□□□ -1.47
SCUBE2-202ENST00000450649 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
SCUBE2-202ENST00000450649 MT1LQ93083 61 aa5.77□□□□□ -1.49
SCUBE2-202ENST00000450649 MUC12Q9UKN1 5478 aa5.75□□□□□ -1.49
SCUBE2-202ENST00000450649 MT1EP04732 61 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms