RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 Q5VV11 94 aa7.24□□□□□ -1.25
SGCE-208ENST00000450385 CRIPTQ9P021 101 aa7.23□□□□□ -1.25
SGCE-208ENST00000450385 HIST1H4AP62805 103 aaKnown RBP7.22□□□□□ -1.25
SGCE-208ENST00000450385 KRTAP19-8Q3LI54 63 aa7.22□□□□□ -1.25
SGCE-208ENST00000450385 KRTAP6-3Q3LI67 103 aa7.2□□□□□ -1.26
SGCE-208ENST00000450385 LINC00643Q86TS7 51 aa7.2□□□□□ -1.26
SGCE-208ENST00000450385 IMUPQ9GZP8 106 aa7.19□□□□□ -1.26
SGCE-208ENST00000450385 SYNE2Q8WXH0 6885 aaKnown RBP7.18□□□□□ -1.26
SGCE-208ENST00000450385 A8MUN3 132 aa7.18□□□□□ -1.26
SGCE-208ENST00000450385 H0Y9P7 68 aa7.17□□□□□ -1.26
SGCE-208ENST00000450385 A6NN06 94 aa7.16□□□□□ -1.26
SGCE-208ENST00000450385 NDUFC1O43677 76 aa7.16□□□□□ -1.26
SGCE-208ENST00000450385 MT1BP07438 61 aa7.16□□□□□ -1.26
SGCE-208ENST00000450385 H0YAA0 97 aa7.15□□□□□ -1.26
SGCE-208ENST00000450385 PCP4P48539 62 aa7.13□□□□□ -1.27
SGCE-208ENST00000450385 A0A087WVE0 104 aa7.08□□□□□ -1.28
SGCE-208ENST00000450385 MP68P56378 58 aa7.07□□□□□ -1.28
SGCE-208ENST00000450385 KRTAP10-5P60370 271 aa7.07□□□□□ -1.28
SGCE-208ENST00000450385 LINC00208Q96KT6 92 aa7.05□□□□□ -1.28
SGCE-208ENST00000450385 OCR1Q9BZK8 76 aa7.04□□□□□ -1.28
SGCE-208ENST00000450385 H3BPC8 53 aa7.03□□□□□ -1.28
SGCE-208ENST00000450385 J3QR89 54 aa7.02□□□□□ -1.29
SGCE-208ENST00000450385 ADM2Q7Z4H4 148 aa6.95□□□□□ -1.3
SGCE-208ENST00000450385 A0A1B0GV90 55 aa6.93□□□□□ -1.3
SGCE-208ENST00000450385 KRTAP19-4Q3LI73 84 aa6.93□□□□□ -1.3
SGCE-208ENST00000450385 C20orf197Q8N268 126 aa6.92□□□□□ -1.3
SGCE-208ENST00000450385 SCGB1A1P11684 91 aa6.9□□□□□ -1.3
SGCE-208ENST00000450385 DMAC1Q96GE9 116 aa6.88□□□□□ -1.31
SGCE-208ENST00000450385 PRO2289Q9P1D8 64 aa6.88□□□□□ -1.31
SGCE-208ENST00000450385 KRTAP5-9P26371 169 aa6.86□□□□□ -1.31
SGCE-208ENST00000450385 MUC12Q9UKN1 5478 aa6.85□□□□□ -1.31
SGCE-208ENST00000450385 R4GN34 69 aa6.84□□□□□ -1.31
SGCE-208ENST00000450385 A0A0A0MQY5 61 aa6.83□□□□□ -1.32
SGCE-208ENST00000450385 PLAC4Q8WY50 150 aa6.83□□□□□ -1.32
SGCE-208ENST00000450385 TRAV7A0A075B6U4 112 aa6.8□□□□□ -1.32
SGCE-208ENST00000450385 SMIM20Q8N5G0 67 aa6.79□□□□□ -1.32
SGCE-208ENST00000450385 ACYP2P14621 99 aa6.76□□□□□ -1.33
SGCE-208ENST00000450385 NEBP20929 6669 aa6.75□□□□□ -1.33
SGCE-208ENST00000450385 P0C880 135 aa6.75□□□□□ -1.33
SGCE-208ENST00000450385 SPTSSBQ8NFR3 76 aa6.73□□□□□ -1.33
SGCE-208ENST00000450385 M0QZ58 72 aa6.71□□□□□ -1.34
SGCE-208ENST00000450385 MT1XP80297 61 aa6.71□□□□□ -1.34
SGCE-208ENST00000450385 KMT2DO14686 5537 aa6.7□□□□□ -1.34
SGCE-208ENST00000450385 K7ERU9 68 aa6.69□□□□□ -1.34
SGCE-208ENST00000450385 MDN1Q9NU22 5596 aa6.68□□□□□ -1.34
SGCE-208ENST00000450385 KRTAP12-2P59991 146 aa6.67□□□□□ -1.34
SGCE-208ENST00000450385 KRTAP20-1Q3LI63 56 aa6.63□□□□□ -1.35
SGCE-208ENST00000450385 MT-ATP8P03928 68 aa6.62□□□□□ -1.35
SGCE-208ENST00000450385 LOC100996750A0A140TA64 210 aa6.6□□□□□ -1.35
SGCE-208ENST00000450385 KRTAP4-6Q9BYQ5 205 aa6.6□□□□□ -1.35
SGCE-208ENST00000450385 LINC01554Q52M75 96 aa6.58□□□□□ -1.36
SGCE-208ENST00000450385 CHKB-CPT1BH3BT56 60 aa6.57□□□□□ -1.36
SGCE-208ENST00000450385 SPRR2FQ96RM1 72 aa6.57□□□□□ -1.36
SGCE-208ENST00000450385 KRTAP8-1Q8IUC2 63 aa6.56□□□□□ -1.36
SGCE-208ENST00000450385 SPANXA2-OT1Q8N9U9 137 aa6.55□□□□□ -1.36
SGCE-208ENST00000450385 KRTAP2-3P0C7H8 128 aa6.51□□□□□ -1.37
SGCE-208ENST00000450385 KRTAP2-4Q9BYR9 128 aa6.51□□□□□ -1.37
SGCE-208ENST00000450385 SPRR2EP22531 72 aa6.48□□□□□ -1.37
SGCE-208ENST00000450385 SPRR2BP35325 72 aa6.48□□□□□ -1.37
SGCE-208ENST00000450385 SPRR2AP35326 72 aa6.48□□□□□ -1.37
SGCE-208ENST00000450385 SNURFQ9Y675 71 aa6.47□□□□□ -1.37
SGCE-208ENST00000450385 SERP2Q8N6R1 65 aa6.45□□□□□ -1.38
SGCE-208ENST00000450385 KRTAP10-12P60413 245 aa6.43□□□□□ -1.38
SGCE-208ENST00000450385 LCE1AQ5T7P2 110 aa6.41□□□□□ -1.38
SGCE-208ENST00000450385 KRTAP4-12Q9BQ66 201 aa6.41□□□□□ -1.38
SGCE-208ENST00000450385 KRTAP4-8A0A0G2JLE6 195 aa6.38□□□□□ -1.39
SGCE-208ENST00000450385 KRTAP4-8Q9BYQ9 185 aa6.38□□□□□ -1.39
SGCE-208ENST00000450385 KRTAP10-7P60409 375 aaPredicted RBP6.37□□□□□ -1.39
SGCE-208ENST00000450385 LCE4AQ5TA78 99 aa6.34□□□□□ -1.39
SGCE-208ENST00000450385 KRTAP2-2Q9BYT5 123 aa6.31□□□□□ -1.4
SGCE-208ENST00000450385 KRTAP2-1Q9BYU5 128 aa6.31□□□□□ -1.4
SGCE-208ENST00000450385 SEC61GP60059 68 aa6.3□□□□□ -1.4
SGCE-208ENST00000450385 SPRR2DP22532 72 aa6.27□□□□□ -1.41
SGCE-208ENST00000450385 COA5Q86WW8 74 aa6.27□□□□□ -1.41
SGCE-208ENST00000450385 KRTAP15-1Q3LI76 137 aa6.26□□□□□ -1.41
SGCE-208ENST00000450385 SERP1Q9Y6X1 66 aa6.26□□□□□ -1.41
SGCE-208ENST00000450385 KRTAP13-4Q3LI77 160 aa6.25□□□□□ -1.41
SGCE-208ENST00000450385 CAMK2N1Q7Z7J9 78 aa6.25□□□□□ -1.41
SGCE-208ENST00000450385 COX7CP15954 63 aa6.22□□□□□ -1.41
SGCE-208ENST00000450385 KRTAP9-4Q9BYQ2 154 aa6.18□□□□□ -1.42
SGCE-208ENST00000450385 KRTAP9-9Q9BYP9 154 aa6.15□□□□□ -1.42
SGCE-208ENST00000450385 A0A1B0GU33 70 aa6.13□□□□□ -1.43
SGCE-208ENST00000450385 H7BZZ5 65 aa6.12□□□□□ -1.43
SGCE-208ENST00000450385 LCE3BQ5TA77 95 aa6.12□□□□□ -1.43
SGCE-208ENST00000450385 A0A0D9SG42 100 aa6.06□□□□□ -1.44
SGCE-208ENST00000450385 SPATA8Q6RVD6 105 aa6.04□□□□□ -1.44
SGCE-208ENST00000450385 SPINT4Q6UDR6 99 aa6.02□□□□□ -1.45
SGCE-208ENST00000450385 SMIM26A0A096LP01 95 aa6.01□□□□□ -1.45
SGCE-208ENST00000450385 KRTAP19-7Q3SYF9 63 aa6.01□□□□□ -1.45
SGCE-208ENST00000450385 A0A1B0GU69 56 aa5.99□□□□□ -1.45
SGCE-208ENST00000450385 KRTAP12-1P59990 96 aa5.99□□□□□ -1.45
SGCE-208ENST00000450385 LCE5AQ5TCM9 118 aa5.99□□□□□ -1.45
SGCE-208ENST00000450385 CYSTM1Q9H1C7 97 aa5.99□□□□□ -1.45
SGCE-208ENST00000450385 MT1EP04732 61 aa5.96□□□□□ -1.46
SGCE-208ENST00000450385 KRTAP19-3Q7Z4W3 81 aa5.95□□□□□ -1.46
SGCE-208ENST00000450385 ANAPC13Q9BS18 74 aa5.94□□□□□ -1.46
SGCE-208ENST00000450385 ATP5EP56381 51 aaPredicted RBP5.89□□□□□ -1.47
SGCE-208ENST00000450385 DSTQ03001 7570 aaKnown RBP5.87□□□□□ -1.47
SGCE-208ENST00000450385 PRR15LQ9BU68 103 aa5.87□□□□□ -1.47
SGCE-208ENST00000450385 MT1GP13640 62 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms