RNA–Protein interactions for RNA: ENST00000449832.1

AC009961.3-201, humanhuman

BASIC

Gene AC009961.3, Length 765 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009961.3-201ENST00000449832 SPINK6Q6UWN8 80 aa1.19□□□□□ -2.22
AC009961.3-201ENST00000449832 SONP18583 2426 aaKnown RBP1.19□□□□□ -2.22
AC009961.3-201ENST00000449832 GCN1Q92616 2671 aaKnown RBP1.19□□□□□ -2.22
AC009961.3-201ENST00000449832 DNAH17Q9UFH2 4485 aa1.19□□□□□ -2.22
AC009961.3-201ENST00000449832 PKD1L2Q7Z442 2459 aa1.18□□□□□ -2.22
AC009961.3-201ENST00000449832 MTORP42345 2549 aa1.18□□□□□ -2.22
AC009961.3-201ENST00000449832 ZFYVE26Q68DK2 2539 aa1.17□□□□□ -2.22
AC009961.3-201ENST00000449832 UNC79Q9P2D8 2635 aa1.17□□□□□ -2.22
AC009961.3-201ENST00000449832 DEFB135Q30KP9 77 aa1.17□□□□□ -2.22
AC009961.3-201ENST00000449832 APLNQ9ULZ1 77 aa1.17□□□□□ -2.22
AC009961.3-201ENST00000449832 CENPEQ02224 2701 aa1.17□□□□□ -2.22
AC009961.3-201ENST00000449832 DNAH7Q8WXX0 4024 aa1.17□□□□□ -2.22
AC009961.3-201ENST00000449832 VPS13CQ709C8 3753 aa1.17□□□□□ -2.22
AC009961.3-201ENST00000449832 EPG5Q9HCE0 2579 aa1.17□□□□□ -2.22
AC009961.3-201ENST00000449832 DNAH10Q8IVF4 4471 aa1.17□□□□□ -2.22
AC009961.3-201ENST00000449832 HIVEP1P15822 2718 aa1.17□□□□□ -2.22
AC009961.3-201ENST00000449832 ADGRG4Q8IZF6 3080 aa1.16□□□□□ -2.22
AC009961.3-201ENST00000449832 TEP1Q99973 2627 aaKnown RBP1.16□□□□□ -2.22
AC009961.3-201ENST00000449832 CMYA5Q8N3K9 4069 aa1.16□□□□□ -2.22
AC009961.3-201ENST00000449832 DEFB4AO15263 64 aa1.16□□□□□ -2.22
AC009961.3-201ENST00000449832 SPART-AS1P0CW21 52 aa1.16□□□□□ -2.22
AC009961.3-201ENST00000449832 Q5VSD8 79 aa1.16□□□□□ -2.22
AC009961.3-201ENST00000449832 SRRM2Q9UQ35 2752 aaKnown RBP1.16□□□□□ -2.22
AC009961.3-201ENST00000449832 ZNF292O60281 2723 aa1.16□□□□□ -2.22
AC009961.3-201ENST00000449832 USP9YO00507 2555 aaPredicted RBP1.15□□□□□ -2.22
AC009961.3-201ENST00000449832 EYSQ5T1H1 3165 aa1.15□□□□□ -2.22
AC009961.3-201ENST00000449832 HTN3P15516 51 aa1.15□□□□□ -2.23
AC009961.3-201ENST00000449832 ITPR3Q14573 2671 aa1.15□□□□□ -2.23
AC009961.3-201ENST00000449832 TENM4Q6N022 2769 aa1.15□□□□□ -2.23
AC009961.3-201ENST00000449832 CEP295Q9C0D2 2601 aa1.15□□□□□ -2.23
AC009961.3-201ENST00000449832 NIPBLQ6KC79 2804 aaeCLIP1.14□□□□□ -2.23
AC009961.3-201ENST00000449832 HELZ2Q9BYK8 2649 aaKnown RBP1.14□□□□□ -2.23
AC009961.3-201ENST00000449832 LRRK2Q5S007 2527 aa1.14□□□□□ -2.23
AC009961.3-201ENST00000449832 HECTD4Q9Y4D8 3996 aa1.14□□□□□ -2.23
AC009961.3-201ENST00000449832 DNAH3Q8TD57 4116 aa1.14□□□□□ -2.23
AC009961.3-201ENST00000449832 CACNA1AO00555 2505 aa1.14□□□□□ -2.23
AC009961.3-201ENST00000449832 TGP01266 2768 aa1.13□□□□□ -2.23
AC009961.3-201ENST00000449832 NBEAL1Q6ZS30 2694 aa1.13□□□□□ -2.23
AC009961.3-201ENST00000449832 COL7A1Q02388 2944 aa1.13□□□□□ -2.23
AC009961.3-201ENST00000449832 DNAH9Q9NYC9 4486 aa1.13□□□□□ -2.23
AC009961.3-201ENST00000449832 CSMD2Q7Z408 3487 aa1.13□□□□□ -2.23
AC009961.3-201ENST00000449832 MYO9AB2RTY4 2548 aa1.13□□□□□ -2.23
AC009961.3-201ENST00000449832 PDZD2O15018 2839 aa1.12□□□□□ -2.23
AC009961.3-201ENST00000449832 ANKRD11Q6UB99 2663 aaPredicted RBP1.12□□□□□ -2.23
AC009961.3-201ENST00000449832 LYSTQ99698 3801 aa1.12□□□□□ -2.23
AC009961.3-201ENST00000449832 DMBT1Q9UGM3 2413 aaPredicted RBP1.12□□□□□ -2.23
AC009961.3-201ENST00000449832 STAB2Q8WWQ8 2551 aa1.11□□□□□ -2.23
AC009961.3-201ENST00000449832 M0QZ58 72 aa1.11□□□□□ -2.23
AC009961.3-201ENST00000449832 SVEP1Q4LDE5 3571 aa1.11□□□□□ -2.23
AC009961.3-201ENST00000449832 SACSQ9NZJ4 4579 aa1.1□□□□□ -2.23
AC009961.3-201ENST00000449832 BDP1A6H8Y1 2624 aa1.1□□□□□ -2.23
AC009961.3-201ENST00000449832 TENM3Q9P273 2699 aa1.1□□□□□ -2.23
AC009961.3-201ENST00000449832 PKHD1L1Q86WI1 4243 aa1.1□□□□□ -2.23
AC009961.3-201ENST00000449832 FLGP20930 4061 aaPredicted RBP1.1□□□□□ -2.23
AC009961.3-201ENST00000449832 CFAP46Q8IYW2 2715 aa1.09□□□□□ -2.23
AC009961.3-201ENST00000449832 NOTCH1P46531 2555 aa1.09□□□□□ -2.23
AC009961.3-201ENST00000449832 VPS13BQ7Z7G8 4022 aa1.09□□□□□ -2.24
AC009961.3-201ENST00000449832 NBEAL2Q6ZNJ1 2754 aa1.08□□□□□ -2.24
AC009961.3-201ENST00000449832 MXRA5Q9NR99 2828 aa1.08□□□□□ -2.24
AC009961.3-201ENST00000449832 ITPR2Q14571 2701 aa1.08□□□□□ -2.24
AC009961.3-201ENST00000449832 RPS29P62273 56 aaKnown RBP1.08□□□□□ -2.24
AC009961.3-201ENST00000449832 SMR3AQ99954 134 aa1.08□□□□□ -2.24
AC009961.3-201ENST00000449832 ABCA12Q86UK0 2595 aa1.08□□□□□ -2.24
AC009961.3-201ENST00000449832 ZNF469Q96JG9 3925 aaPredicted RBP1.08□□□□□ -2.24
AC009961.3-201ENST00000449832 KMT2AQ03164 3969 aa1.07□□□□□ -2.24
AC009961.3-201ENST00000449832 ZANQ9Y493 2812 aa1.07□□□□□ -2.24
AC009961.3-201ENST00000449832 FASNP49327 2511 aaKnown RBP1.07□□□□□ -2.24
AC009961.3-201ENST00000449832 PKD1P98161 4303 aa1.06□□□□□ -2.24
AC009961.3-201ENST00000449832 HSPG2P98160 4391 aa1.06□□□□□ -2.24
AC009961.3-201ENST00000449832 USP24Q9UPU5 2620 aa1.06□□□□□ -2.24
AC009961.3-201ENST00000449832 DNAH5Q8TE73 4624 aa1.06□□□□□ -2.24
AC009961.3-201ENST00000449832 KRTAP21-3Q3LHN1 58 aa1.06□□□□□ -2.24
AC009961.3-201ENST00000449832 TNXBP22105 4242 aa1.06□□□□□ -2.24
AC009961.3-201ENST00000449832 APOBP04114 4563 aaKnown RBP1.06□□□□□ -2.24
AC009961.3-201ENST00000449832 ACANP16112 2415 aa1.06□□□□□ -2.24
AC009961.3-201ENST00000449832 PKD1L1Q8TDX9 2849 aa1.06□□□□□ -2.24
AC009961.3-201ENST00000449832 ATRQ13535 2644 aa1.05□□□□□ -2.24
AC009961.3-201ENST00000449832 STARD9Q9P2P6 4700 aa1.05□□□□□ -2.24
AC009961.3-201ENST00000449832 FAT2Q9NYQ8 4349 aa1.05□□□□□ -2.24
AC009961.3-201ENST00000449832 FLNAP21333 2647 aaKnown RBP1.04□□□□□ -2.24
AC009961.3-201ENST00000449832 LRP1Q07954 4544 aaKnown RBP1.04□□□□□ -2.24
AC009961.3-201ENST00000449832 MYO18BQ8IUG5 2567 aa1.03□□□□□ -2.24
AC009961.3-201ENST00000449832 FAT3Q8TDW7 4589 aa1.03□□□□□ -2.24
AC009961.3-201ENST00000449832 FBN2P35556 2912 aa1.03□□□□□ -2.24
AC009961.3-201ENST00000449832 ACACBO00763 2458 aa1.03□□□□□ -2.25
AC009961.3-201ENST00000449832 PKHD1P08F94 4074 aa1.02□□□□□ -2.25
AC009961.3-201ENST00000449832 MGAM2Q2M2H8 2515 aa1.01□□□□□ -2.25
AC009961.3-201ENST00000449832 FLNCQ14315 2725 aa1□□□□□ -2.25
AC009961.3-201ENST00000449832 NSD1Q96L73 2696 aaPredicted RBP1□□□□□ -2.25
AC009961.3-201ENST00000449832 PLECQ15149 4684 aaKnown RBP1□□□□□ -2.25
AC009961.3-201ENST00000449832 KRTAP5-10Q6L8G5 202 aa1□□□□□ -2.25
AC009961.3-201ENST00000449832 IGSF10Q6WRI0 2623 aa1□□□□□ -2.25
AC009961.3-201ENST00000449832 TNP1P09430 55 aa0.99□□□□□ -2.25
AC009961.3-201ENST00000449832 C9orf92A6NGG3 77 aa0.98□□□□□ -2.25
AC009961.3-201ENST00000449832 POLQO75417 2590 aa0.98□□□□□ -2.25
AC009961.3-201ENST00000449832 STAB1Q9NY15 2570 aa0.97□□□□□ -2.25
AC009961.3-201ENST00000449832 DYNC1H1Q14204 4646 aaKnown RBP0.96□□□□□ -2.26
AC009961.3-201ENST00000449832 KRTAP2-3P0C7H8 128 aa0.96□□□□□ -2.26
AC009961.3-201ENST00000449832 KRTAP8-1Q8IUC2 63 aa0.96□□□□□ -2.26
AC009961.3-201ENST00000449832 KRTAP2-4Q9BYR9 128 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms