RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 SMIM20Q8N5G0 67 aa4.66□□□□□ -1.66
RFX3-207ENST00000449190 FAM236AA0A1B0GUQ0 79 aa4.65□□□□□ -1.67
RFX3-207ENST00000449190 FAM236BA0A1B0GV22 79 aa4.65□□□□□ -1.67
RFX3-207ENST00000449190 C5orf47Q569G3 176 aa4.65□□□□□ -1.67
RFX3-207ENST00000449190 OCR1Q9BZK8 76 aa4.65□□□□□ -1.67
RFX3-207ENST00000449190 M0R2T5 61 aa4.64□□□□□ -1.67
RFX3-207ENST00000449190 MPLKIPQ8TAP9 179 aa4.64□□□□□ -1.67
RFX3-207ENST00000449190 C1orf64Q8NEQ6 169 aa4.63□□□□□ -1.67
RFX3-207ENST00000449190 KRTAP10-6P60371 365 aaPredicted RBP4.62□□□□□ -1.67
RFX3-207ENST00000449190 LINC00208Q96KT6 92 aa4.62□□□□□ -1.67
RFX3-207ENST00000449190 CYP4F30PQ9H0H9 118 aa4.62□□□□□ -1.67
RFX3-207ENST00000449190 TRAV7A0A075B6U4 112 aa4.61□□□□□ -1.67
RFX3-207ENST00000449190 H3BPC8 53 aa4.61□□□□□ -1.67
RFX3-207ENST00000449190 FLGP20930 4061 aaPredicted RBP4.6□□□□□ -1.67
RFX3-207ENST00000449190 C4orf26Q17RF5 130 aa4.6□□□□□ -1.67
RFX3-207ENST00000449190 H1FX-AS1Q4G0G2 97 aa4.57□□□□□ -1.68
RFX3-207ENST00000449190 SERP2Q8N6R1 65 aa4.54□□□□□ -1.68
RFX3-207ENST00000449190 KLKP1Q107X0 134 aa4.52□□□□□ -1.69
RFX3-207ENST00000449190 A8MUN3 132 aa4.48□□□□□ -1.69
RFX3-207ENST00000449190 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.48□□□□□ -1.69
RFX3-207ENST00000449190 C20orf197Q8N268 126 aa4.48□□□□□ -1.69
RFX3-207ENST00000449190 CRCT1Q9UGL9 99 aa4.48□□□□□ -1.69
RFX3-207ENST00000449190 S4R3F8 94 aa4.48□□□□□ -1.69
RFX3-207ENST00000449190 SNURFQ9Y675 71 aa4.47□□□□□ -1.69
RFX3-207ENST00000449190 COX7CP15954 63 aa4.46□□□□□ -1.7
RFX3-207ENST00000449190 ANAPC13Q9BS18 74 aa4.46□□□□□ -1.7
RFX3-207ENST00000449190 CSAG1Q6PB30 78 aa4.43□□□□□ -1.7
RFX3-207ENST00000449190 NDUFC1O43677 76 aa4.41□□□□□ -1.7
RFX3-207ENST00000449190 MT2AP02795 61 aa4.41□□□□□ -1.7
RFX3-207ENST00000449190 KRTAP15-1Q3LI76 137 aa4.41□□□□□ -1.7
RFX3-207ENST00000449190 LCA10Q71F78 164 aa4.41□□□□□ -1.7
RFX3-207ENST00000449190 ACYP2P14621 99 aa4.4□□□□□ -1.71
RFX3-207ENST00000449190 DMAC1Q96GE9 116 aa4.4□□□□□ -1.71
RFX3-207ENST00000449190 SPANXA2-OT1Q8N9U9 137 aa4.39□□□□□ -1.71
RFX3-207ENST00000449190 FSIP2Q5CZC0 6907 aa4.39□□□□□ -1.71
RFX3-207ENST00000449190 KRTAP10-10P60014 251 aa4.38□□□□□ -1.71
RFX3-207ENST00000449190 MT1FP04733 61 aa4.37□□□□□ -1.71
RFX3-207ENST00000449190 CHKB-CPT1BH3BT56 60 aa4.35□□□□□ -1.71
RFX3-207ENST00000449190 SPTSSBQ8NFR3 76 aa4.34□□□□□ -1.71
RFX3-207ENST00000449190 CCDC179H3BU77 68 aa4.32□□□□□ -1.72
RFX3-207ENST00000449190 H7BZZ5 65 aa4.3□□□□□ -1.72
RFX3-207ENST00000449190 KRTAP5-11Q6L8G4 156 aa4.29□□□□□ -1.72
RFX3-207ENST00000449190 CYSTM1Q9H1C7 97 aa4.27□□□□□ -1.73
RFX3-207ENST00000449190 H0YAA0 97 aa4.25□□□□□ -1.73
RFX3-207ENST00000449190 COA5Q86WW8 74 aa4.25□□□□□ -1.73
RFX3-207ENST00000449190 ATP5EP56381 51 aaPredicted RBP4.24□□□□□ -1.73
RFX3-207ENST00000449190 KRTAP10-7P60409 375 aaPredicted RBP4.24□□□□□ -1.73
RFX3-207ENST00000449190 ADM2Q7Z4H4 148 aa4.24□□□□□ -1.73
RFX3-207ENST00000449190 CRIPTQ9P021 101 aa4.21□□□□□ -1.74
RFX3-207ENST00000449190 TMEM258P61165 79 aa4.2□□□□□ -1.74
RFX3-207ENST00000449190 USH2AO75445 5202 aa4.18□□□□□ -1.74
RFX3-207ENST00000449190 SEC61GP60059 68 aa4.16□□□□□ -1.74
RFX3-207ENST00000449190 KRTAP19-6Q3LI70 58 aa4.16□□□□□ -1.74
RFX3-207ENST00000449190 SSPOA2VEC9 5147 aa4.15□□□□□ -1.75
RFX3-207ENST00000449190 P0C880 135 aa4.14□□□□□ -1.75
RFX3-207ENST00000449190 PCP4P48539 62 aa4.14□□□□□ -1.75
RFX3-207ENST00000449190 SERP1Q9Y6X1 66 aa4.13□□□□□ -1.75
RFX3-207ENST00000449190 R4GN34 69 aa4.13□□□□□ -1.75
RFX3-207ENST00000449190 SPRR2GQ9BYE4 73 aa4.12□□□□□ -1.75
RFX3-207ENST00000449190 M0QZ58 72 aa4.09□□□□□ -1.75
RFX3-207ENST00000449190 Q5VV11 94 aa4.09□□□□□ -1.75
RFX3-207ENST00000449190 FCGBPQ9Y6R7 5405 aaPredicted RBP4.07□□□□□ -1.76
RFX3-207ENST00000449190 A0A1B0GU69 56 aa4.06□□□□□ -1.76
RFX3-207ENST00000449190 KRTAP19-8Q3LI54 63 aa4.06□□□□□ -1.76
RFX3-207ENST00000449190 LCE1AQ5T7P2 110 aa4.05□□□□□ -1.76
RFX3-207ENST00000449190 PRR15LQ9BU68 103 aa4.05□□□□□ -1.76
RFX3-207ENST00000449190 LINC01554Q52M75 96 aa4.04□□□□□ -1.76
RFX3-207ENST00000449190 MT1BP07438 61 aa4.03□□□□□ -1.76
RFX3-207ENST00000449190 PLAC4Q8WY50 150 aa4.02□□□□□ -1.77
RFX3-207ENST00000449190 A0A1B0GU33 70 aa4.01□□□□□ -1.77
RFX3-207ENST00000449190 LINC01558Q9Y6Z2 57 aa4□□□□□ -1.77
RFX3-207ENST00000449190 A6NN06 94 aa3.98□□□□□ -1.77
RFX3-207ENST00000449190 V9GYY9 64 aa3.98□□□□□ -1.77
RFX3-207ENST00000449190 KRTAP23-1A1A580 65 aa3.97□□□□□ -1.77
RFX3-207ENST00000449190 MACF1Q9UPN3 7388 aaKnown RBP3.96□□□□□ -1.77
RFX3-207ENST00000449190 SMIM26A0A096LP01 95 aa3.95□□□□□ -1.78
RFX3-207ENST00000449190 KRTAP10-5P60370 271 aa3.94□□□□□ -1.78
RFX3-207ENST00000449190 RPS28P62857 69 aaKnown RBP3.94□□□□□ -1.78
RFX3-207ENST00000449190 KRTAP6-3Q3LI67 103 aa3.94□□□□□ -1.78
RFX3-207ENST00000449190 KRTAP13-4Q3LI77 160 aa3.93□□□□□ -1.78
RFX3-207ENST00000449190 SPATA8Q6RVD6 105 aa3.93□□□□□ -1.78
RFX3-207ENST00000449190 SYNE2Q8WXH0 6885 aaKnown RBP3.93□□□□□ -1.78
RFX3-207ENST00000449190 A0A0D9SG42 100 aa3.91□□□□□ -1.78
RFX3-207ENST00000449190 Q1T7F1 81 aa3.91□□□□□ -1.78
RFX3-207ENST00000449190 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
RFX3-207ENST00000449190 PRO2289Q9P1D8 64 aa3.9□□□□□ -1.79
RFX3-207ENST00000449190 UQCR11O14957 56 aa3.89□□□□□ -1.79
RFX3-207ENST00000449190 PSPHP1O15172 72 aa3.87□□□□□ -1.79
RFX3-207ENST00000449190 SPINT4Q6UDR6 99 aa3.86□□□□□ -1.79
RFX3-207ENST00000449190 KRTAP2-2Q9BYT5 123 aa3.86□□□□□ -1.79
RFX3-207ENST00000449190 KRTAP5-1Q6L8H4 278 aa3.85□□□□□ -1.79
RFX3-207ENST00000449190 CAMK2N1Q7Z7J9 78 aa3.85□□□□□ -1.79
RFX3-207ENST00000449190 A8MU10 97 aa3.82□□□□□ -1.8
RFX3-207ENST00000449190 MIR22HGQ0VDD5 57 aa3.82□□□□□ -1.8
RFX3-207ENST00000449190 MT1XP80297 61 aa3.81□□□□□ -1.8
RFX3-207ENST00000449190 KRTAP12-1P59990 96 aa3.79□□□□□ -1.8
RFX3-207ENST00000449190 A6NED7 52 aa3.78□□□□□ -1.8
RFX3-207ENST00000449190 KRTAP5-9P26371 169 aa3.77□□□□□ -1.81
RFX3-207ENST00000449190 KRTAP12-2P59991 146 aa3.77□□□□□ -1.81
RFX3-207ENST00000449190 K7ERS5 55 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms