RNA–Protein interactions for RNA: ENST00000448471.2

CDK3-202, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDK3, Length 1,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-202ENST00000448471 COA5Q86WW8 74 aa7.62□□□□□ -1.19
CDK3-202ENST00000448471 LORP23490 312 aaPredicted RBP7.61□□□□□ -1.19
CDK3-202ENST00000448471 KRTAP10-6P60371 365 aaPredicted RBP7.59□□□□□ -1.19
CDK3-202ENST00000448471 A8MUN3 132 aa7.56□□□□□ -1.2
CDK3-202ENST00000448471 C4orf26Q17RF5 130 aa7.53□□□□□ -1.2
CDK3-202ENST00000448471 M0R2T5 61 aa7.51□□□□□ -1.21
CDK3-202ENST00000448471 KRTAP9-7A8MTY7 169 aa7.5□□□□□ -1.21
CDK3-202ENST00000448471 Q1T7F1 81 aa7.49□□□□□ -1.21
CDK3-202ENST00000448471 COX6B2Q6YFQ2 88 aa7.47□□□□□ -1.21
CDK3-202ENST00000448471 V9GYY9 64 aa7.47□□□□□ -1.21
CDK3-202ENST00000448471 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.46□□□□□ -1.21
CDK3-202ENST00000448471 CHKB-CPT1BH3BT56 60 aa7.46□□□□□ -1.21
CDK3-202ENST00000448471 KRTAP3-1Q9BYR8 98 aa7.46□□□□□ -1.22
CDK3-202ENST00000448471 MPLKIPQ8TAP9 179 aa7.45□□□□□ -1.22
CDK3-202ENST00000448471 FLGP20930 4061 aaPredicted RBP7.41□□□□□ -1.22
CDK3-202ENST00000448471 LINC01558Q9Y6Z2 57 aa7.37□□□□□ -1.23
CDK3-202ENST00000448471 USH2AO75445 5202 aa7.36□□□□□ -1.23
CDK3-202ENST00000448471 SSPOA2VEC9 5147 aa7.35□□□□□ -1.23
CDK3-202ENST00000448471 SPTSSBQ8NFR3 76 aa7.33□□□□□ -1.24
CDK3-202ENST00000448471 RBM12B-AS1Q9P1G2 102 aa7.29□□□□□ -1.24
CDK3-202ENST00000448471 PSPHP1O15172 72 aa7.29□□□□□ -1.24
CDK3-202ENST00000448471 PRR15LQ9BU68 103 aa7.28□□□□□ -1.24
CDK3-202ENST00000448471 H1FX-AS1Q4G0G2 97 aa7.26□□□□□ -1.25
CDK3-202ENST00000448471 Q5VV11 94 aa7.25□□□□□ -1.25
CDK3-202ENST00000448471 FCGBPQ9Y6R7 5405 aaPredicted RBP7.23□□□□□ -1.25
CDK3-202ENST00000448471 S4R3F8 94 aa7.21□□□□□ -1.25
CDK3-202ENST00000448471 A0A1B0GU69 56 aa7.2□□□□□ -1.26
CDK3-202ENST00000448471 LCA10Q71F78 164 aa7.19□□□□□ -1.26
CDK3-202ENST00000448471 KRTAP9-8Q9BYQ0 159 aa7.19□□□□□ -1.26
CDK3-202ENST00000448471 KRTAP3-3Q9BYR6 98 aa7.19□□□□□ -1.26
CDK3-202ENST00000448471 SYNE2Q8WXH0 6885 aaKnown RBP7.16□□□□□ -1.26
CDK3-202ENST00000448471 SEC61GP60059 68 aa7.15□□□□□ -1.27
CDK3-202ENST00000448471 MACF1Q9UPN3 7388 aaKnown RBP7.14□□□□□ -1.27
CDK3-202ENST00000448471 KRTAP19-1Q8IUB9 90 aa7.12□□□□□ -1.27
CDK3-202ENST00000448471 A6NED7 52 aa7.08□□□□□ -1.28
CDK3-202ENST00000448471 BRK1Q8WUW1 75 aa7.07□□□□□ -1.28
CDK3-202ENST00000448471 CSAG1Q6PB30 78 aa7.06□□□□□ -1.28
CDK3-202ENST00000448471 LCE2BO14633 110 aa7.05□□□□□ -1.28
CDK3-202ENST00000448471 MT2AP02795 61 aa7.05□□□□□ -1.28
CDK3-202ENST00000448471 UQCR11O14957 56 aa7.02□□□□□ -1.29
CDK3-202ENST00000448471 SVIPQ8NHG7 77 aa7.01□□□□□ -1.29
CDK3-202ENST00000448471 MT1FP04733 61 aa7□□□□□ -1.29
CDK3-202ENST00000448471 CDC42SE1Q9NRR8 79 aa7□□□□□ -1.29
CDK3-202ENST00000448471 PRO0628Q9UI54 55 aa7□□□□□ -1.29
CDK3-202ENST00000448471 KRTAP9-3Q9BYQ3 159 aa6.97□□□□□ -1.29
CDK3-202ENST00000448471 A0A1B0GU33 70 aa6.96□□□□□ -1.29
CDK3-202ENST00000448471 KRTAP3-2Q9BYR7 98 aa6.96□□□□□ -1.29
CDK3-202ENST00000448471 H0YAA0 97 aa6.95□□□□□ -1.3
CDK3-202ENST00000448471 SPATA8Q6RVD6 105 aa6.95□□□□□ -1.3
CDK3-202ENST00000448471 KRTAP10-10P60014 251 aa6.95□□□□□ -1.3
CDK3-202ENST00000448471 MIR22HGQ0VDD5 57 aa6.93□□□□□ -1.3
CDK3-202ENST00000448471 A8MU10 97 aa6.91□□□□□ -1.3
CDK3-202ENST00000448471 ADM2Q7Z4H4 148 aa6.89□□□□□ -1.31
CDK3-202ENST00000448471 KRTAP19-6Q3LI70 58 aa6.87□□□□□ -1.31
CDK3-202ENST00000448471 P0C880 135 aa6.86□□□□□ -1.31
CDK3-202ENST00000448471 KRTAP6-3Q3LI67 103 aa6.82□□□□□ -1.32
CDK3-202ENST00000448471 NEBP20929 6669 aa6.76□□□□□ -1.33
CDK3-202ENST00000448471 KRTAP13-4Q3LI77 160 aa6.76□□□□□ -1.33
CDK3-202ENST00000448471 M0QZ58 72 aa6.75□□□□□ -1.33
CDK3-202ENST00000448471 PMAIP1Q13794 54 aa6.7□□□□□ -1.34
CDK3-202ENST00000448471 A6NN06 94 aa6.66□□□□□ -1.34
CDK3-202ENST00000448471 R4GN34 69 aa6.65□□□□□ -1.34
CDK3-202ENST00000448471 K7ERS5 55 aa6.62□□□□□ -1.35
CDK3-202ENST00000448471 A0A0D9SG42 100 aa6.61□□□□□ -1.35
CDK3-202ENST00000448471 CRIPTQ9P021 101 aa6.61□□□□□ -1.35
CDK3-202ENST00000448471 MUC12Q9UKN1 5478 aa6.61□□□□□ -1.35
CDK3-202ENST00000448471 KRTAP20-1Q3LI63 56 aa6.53□□□□□ -1.36
CDK3-202ENST00000448471 KRTAP12-1P59990 96 aa6.52□□□□□ -1.36
CDK3-202ENST00000448471 KRTAP12-2P59991 146 aa6.5□□□□□ -1.37
CDK3-202ENST00000448471 LINC01554Q52M75 96 aa6.49□□□□□ -1.37
CDK3-202ENST00000448471 SPINT4Q6UDR6 99 aa6.47□□□□□ -1.37
CDK3-202ENST00000448471 KTN1-AS1Q86SY8 53 aa6.47□□□□□ -1.37
CDK3-202ENST00000448471 SPRR2GQ9BYE4 73 aa6.43□□□□□ -1.38
CDK3-202ENST00000448471 MDN1Q9NU22 5596 aa6.36□□□□□ -1.39
CDK3-202ENST00000448471 ROMO1P60602 79 aa6.35□□□□□ -1.39
CDK3-202ENST00000448471 KRTAP5-9P26371 169 aa6.32□□□□□ -1.4
CDK3-202ENST00000448471 KMT2DO14686 5537 aa6.32□□□□□ -1.4
CDK3-202ENST00000448471 MT1BP07438 61 aa6.3□□□□□ -1.4
CDK3-202ENST00000448471 KRTAP19-8Q3LI54 63 aa6.25□□□□□ -1.41
CDK3-202ENST00000448471 KRTAP2-3P0C7H8 128 aa6.24□□□□□ -1.41
CDK3-202ENST00000448471 KRTAP10-5P60370 271 aa6.24□□□□□ -1.41
CDK3-202ENST00000448471 KRTAP2-4Q9BYR9 128 aa6.24□□□□□ -1.41
CDK3-202ENST00000448471 CAMK2N1Q7Z7J9 78 aa6.23□□□□□ -1.41
CDK3-202ENST00000448471 PRAC1Q96KF2 57 aa6.23□□□□□ -1.41
CDK3-202ENST00000448471 PLAC4Q8WY50 150 aa6.22□□□□□ -1.41
CDK3-202ENST00000448471 C10orf95Q9H7T3 257 aa6.16□□□□□ -1.42
CDK3-202ENST00000448471 KRTAP25-1Q3LHN0 102 aa6.11□□□□□ -1.43
CDK3-202ENST00000448471 SPRR2EP22531 72 aa6.06□□□□□ -1.44
CDK3-202ENST00000448471 SPRR2BP35325 72 aa6.06□□□□□ -1.44
CDK3-202ENST00000448471 SPRR2AP35326 72 aa6.06□□□□□ -1.44
CDK3-202ENST00000448471 SPRR2FQ96RM1 72 aa6.05□□□□□ -1.44
CDK3-202ENST00000448471 KRTAP2-2Q9BYT5 123 aa6.01□□□□□ -1.45
CDK3-202ENST00000448471 KRTAP2-1Q9BYU5 128 aa6.01□□□□□ -1.45
CDK3-202ENST00000448471 TNP1P09430 55 aa5.97□□□□□ -1.45
CDK3-202ENST00000448471 MT1XP80297 61 aa5.95□□□□□ -1.46
CDK3-202ENST00000448471 LCE1AQ5T7P2 110 aa5.92□□□□□ -1.46
CDK3-202ENST00000448471 PRO2289Q9P1D8 64 aa5.89□□□□□ -1.47
CDK3-202ENST00000448471 KRTAP23-1A1A580 65 aa5.89□□□□□ -1.47
CDK3-202ENST00000448471 PP632Q6XCG6 107 aa5.89□□□□□ -1.47
CDK3-202ENST00000448471 KRTAP8-1Q8IUC2 63 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms