RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 KRTAP13-4Q3LI77 160 aa10.67□□□□□ -0.7
SMARCD2-203ENST00000448276 A0A1B0GVY2 172 aa10.64□□□□□ -0.71
SMARCD2-203ENST00000448276 KRTAP10-6P60371 365 aaPredicted RBP10.62□□□□□ -0.71
SMARCD2-203ENST00000448276 RYR3Q15413 4870 aa10.6□□□□□ -0.71
SMARCD2-203ENST00000448276 RPL37P61927 97 aaKnown RBP10.58□□□□□ -0.72
SMARCD2-203ENST00000448276 KRTAP3-3Q9BYR6 98 aa10.58□□□□□ -0.72
SMARCD2-203ENST00000448276 TPRXLQ17RH7 258 aa10.57□□□□□ -0.72
SMARCD2-203ENST00000448276 C10orf95Q9H7T3 257 aa10.54□□□□□ -0.72
SMARCD2-203ENST00000448276 KRTAP10-4P60372 401 aaPredicted RBP10.53□□□□□ -0.72
SMARCD2-203ENST00000448276 KRTAP3-2Q9BYR7 98 aa10.51□□□□□ -0.73
SMARCD2-203ENST00000448276 HSPG2P98160 4391 aa10.47□□□□□ -0.73
SMARCD2-203ENST00000448276 SPINT4Q6UDR6 99 aa10.47□□□□□ -0.73
SMARCD2-203ENST00000448276 KRTAP10-8P60410 259 aa10.46□□□□□ -0.73
SMARCD2-203ENST00000448276 LRP1Q07954 4544 aaKnown RBP10.41□□□□□ -0.74
SMARCD2-203ENST00000448276 FAT3Q8TDW7 4589 aa10.4□□□□□ -0.74
SMARCD2-203ENST00000448276 MYCBP2O75592 4640 aa10.39□□□□□ -0.75
SMARCD2-203ENST00000448276 S4R3F8 94 aa10.37□□□□□ -0.75
SMARCD2-203ENST00000448276 KRTAP12-2P59991 146 aa10.34□□□□□ -0.75
SMARCD2-203ENST00000448276 TNXBP22105 4242 aa10.27□□□□□ -0.77
SMARCD2-203ENST00000448276 EPPK1P58107 5090 aaKnown RBP10.24□□□□□ -0.77
SMARCD2-203ENST00000448276 Q5VSD8 79 aa10.24□□□□□ -0.77
SMARCD2-203ENST00000448276 XP32Q5T750 250 aa10.22□□□□□ -0.77
SMARCD2-203ENST00000448276 NDUFAF8A1L188 74 aa10.21□□□□□ -0.78
SMARCD2-203ENST00000448276 KRTAP15-1Q3LI76 137 aa10.19□□□□□ -0.78
SMARCD2-203ENST00000448276 KRTAP12-1P59990 96 aa10.17□□□□□ -0.78
SMARCD2-203ENST00000448276 LPAP08519 4548 aa10.16□□□□□ -0.78
SMARCD2-203ENST00000448276 KIAA1109Q2LD37 5005 aa10.16□□□□□ -0.78
SMARCD2-203ENST00000448276 RYR1P21817 5038 aa10.14□□□□□ -0.79
SMARCD2-203ENST00000448276 KRTAP17-1Q9BYP8 105 aa10.11□□□□□ -0.79
SMARCD2-203ENST00000448276 LRP2P98164 4655 aa9.92□□□□□ -0.82
SMARCD2-203ENST00000448276 MT1HL1P0DM35 61 aa9.88□□□□□ -0.83
SMARCD2-203ENST00000448276 M0QZ58 72 aa9.86□□□□□ -0.83
SMARCD2-203ENST00000448276 ABCA13Q86UQ4 5058 aa9.74□□□□□ -0.85
SMARCD2-203ENST00000448276 KRTAP4-5Q9BYR2 181 aa9.68□□□□□ -0.86
SMARCD2-203ENST00000448276 R4GN34 69 aa9.68□□□□□ -0.86
SMARCD2-203ENST00000448276 LORP23490 312 aaPredicted RBP9.65□□□□□ -0.86
SMARCD2-203ENST00000448276 PLAC4Q8WY50 150 aa9.56□□□□□ -0.88
SMARCD2-203ENST00000448276 HERC2O95714 4834 aa9.51□□□□□ -0.89
SMARCD2-203ENST00000448276 BIRC6Q9NR09 4857 aa9.51□□□□□ -0.89
SMARCD2-203ENST00000448276 PCLOQ9Y6V0 5065 aa9.37□□□□□ -0.91
SMARCD2-203ENST00000448276 J3QL48 77 aa9.36□□□□□ -0.91
SMARCD2-203ENST00000448276 MUC17Q685J3 4493 aa9.35□□□□□ -0.91
SMARCD2-203ENST00000448276 KRTAP4-1Q9BYQ7 146 aa9.31□□□□□ -0.92
SMARCD2-203ENST00000448276 CAMK2N1Q7Z7J9 78 aa9.26□□□□□ -0.93
SMARCD2-203ENST00000448276 SEC61BP60468 96 aaKnown RBP9.25□□□□□ -0.93
SMARCD2-203ENST00000448276 HERC1Q15751 4861 aa9.25□□□□□ -0.93
SMARCD2-203ENST00000448276 MUC2Q02817 5179 aa9.19□□□□□ -0.94
SMARCD2-203ENST00000448276 LUZP6Q538Z0 58 aa9.18□□□□□ -0.94
SMARCD2-203ENST00000448276 PP632Q6XCG6 107 aa9.11□□□□□ -0.95
SMARCD2-203ENST00000448276 A0A0A0MQY5 61 aa9.07□□□□□ -0.96
SMARCD2-203ENST00000448276 KRTAP19-2Q3LHN2 52 aa9.06□□□□□ -0.96
SMARCD2-203ENST00000448276 HMCN2Q8NDA2 5059 aa8.89□□□□□ -0.99
SMARCD2-203ENST00000448276 TNP1P09430 55 aa8.88□□□□□ -0.99
SMARCD2-203ENST00000448276 FLGP20930 4061 aaPredicted RBP8.83□□□□□ -1
SMARCD2-203ENST00000448276 UBR4Q5T4S7 5183 aa8.74□□□□□ -1.01
SMARCD2-203ENST00000448276 RNF213Q63HN8 5207 aa8.73□□□□□ -1.01
SMARCD2-203ENST00000448276 FAT4Q6V0I7 4981 aa8.72□□□□□ -1.01
SMARCD2-203ENST00000448276 SPRR5A0A1B0GTR4 108 aa8.72□□□□□ -1.01
SMARCD2-203ENST00000448276 KRTAP23-1A1A580 65 aa8.62□□□□□ -1.03
SMARCD2-203ENST00000448276 LCE3AQ5TA76 89 aa8.49□□□□□ -1.05
SMARCD2-203ENST00000448276 LCE2CQ5TA81 110 aa8.48□□□□□ -1.05
SMARCD2-203ENST00000448276 KRTAP19-1Q8IUB9 90 aa8.45□□□□□ -1.06
SMARCD2-203ENST00000448276 M0R2T5 61 aa8.42□□□□□ -1.06
SMARCD2-203ENST00000448276 SPRR2GQ9BYE4 73 aa8.39□□□□□ -1.07
SMARCD2-203ENST00000448276 MT1HP80294 61 aa8.29□□□□□ -1.08
SMARCD2-203ENST00000448276 MT1FP04733 61 aa8.16□□□□□ -1.1
SMARCD2-203ENST00000448276 KRTAP10-10P60014 251 aa8.16□□□□□ -1.1
SMARCD2-203ENST00000448276 KRTAP8-1Q8IUC2 63 aa8.11□□□□□ -1.11
SMARCD2-203ENST00000448276 MT2AP02795 61 aa8.1□□□□□ -1.11
SMARCD2-203ENST00000448276 PRO2289Q9P1D8 64 aa8.09□□□□□ -1.11
SMARCD2-203ENST00000448276 KRTAP9-8Q9BYQ0 159 aa8.06□□□□□ -1.12
SMARCD2-203ENST00000448276 KRTAP10-5P60370 271 aa8.01□□□□□ -1.13
SMARCD2-203ENST00000448276 KRTAP12-3P60328 96 aa7.99□□□□□ -1.13
SMARCD2-203ENST00000448276 MT1XP80297 61 aa7.99□□□□□ -1.13
SMARCD2-203ENST00000448276 MT1BP07438 61 aa7.94□□□□□ -1.14
SMARCD2-203ENST00000448276 KRTAP10-12P60413 245 aa7.93□□□□□ -1.14
SMARCD2-203ENST00000448276 INE1O15225 51 aa7.92□□□□□ -1.14
SMARCD2-203ENST00000448276 KRTAP19-8Q3LI54 63 aa7.92□□□□□ -1.14
SMARCD2-203ENST00000448276 KRTAP10-7P60409 375 aaPredicted RBP7.89□□□□□ -1.15
SMARCD2-203ENST00000448276 KRTAP9-3Q9BYQ3 159 aa7.72□□□□□ -1.17
SMARCD2-203ENST00000448276 KMT2DO14686 5537 aa7.65□□□□□ -1.18
SMARCD2-203ENST00000448276 USH2AO75445 5202 aa7.62□□□□□ -1.19
SMARCD2-203ENST00000448276 KRTAP19-5Q3LI72 72 aa7.6□□□□□ -1.19
SMARCD2-203ENST00000448276 LCE3CQ5T5A8 94 aa7.53□□□□□ -1.2
SMARCD2-203ENST00000448276 LCE2AQ5TA79 106 aaPredicted RBP7.51□□□□□ -1.21
SMARCD2-203ENST00000448276 LCE2BO14633 110 aa7.48□□□□□ -1.21
SMARCD2-203ENST00000448276 KRTAP9-6A8MVA2 160 aa7.44□□□□□ -1.22
SMARCD2-203ENST00000448276 KRTAP4-8A0A0G2JLE6 195 aa7.39□□□□□ -1.23
SMARCD2-203ENST00000448276 KRTAP4-8Q9BYQ9 185 aa7.39□□□□□ -1.23
SMARCD2-203ENST00000448276 FSIP2Q5CZC0 6907 aa7.38□□□□□ -1.23
SMARCD2-203ENST00000448276 KRTAP4-7Q9BYR0 210 aa7.31□□□□□ -1.24
SMARCD2-203ENST00000448276 KRTAP2-3P0C7H8 128 aa7.14□□□□□ -1.27
SMARCD2-203ENST00000448276 KRTAP2-4Q9BYR9 128 aa7.14□□□□□ -1.27
SMARCD2-203ENST00000448276 KRTAP2-1Q9BYU5 128 aa7.14□□□□□ -1.27
SMARCD2-203ENST00000448276 KRTAP19-7Q3SYF9 63 aa7.11□□□□□ -1.27
SMARCD2-203ENST00000448276 SSPOA2VEC9 5147 aa7.08□□□□□ -1.28
SMARCD2-203ENST00000448276 MT1LQ93083 61 aa6.92□□□□□ -1.3
SMARCD2-203ENST00000448276 MT1EP04732 61 aa6.85□□□□□ -1.31
SMARCD2-203ENST00000448276 LOC100996750A0A140TA64 210 aa6.79□□□□□ -1.32
SMARCD2-203ENST00000448276 KRTAP4-3Q9BYR4 195 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms