RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 HRES1P13985 223 aa7.18□□□□□ -1.26
SREBF1-207ENST00000447641 COX6B2Q6YFQ2 88 aa7.18□□□□□ -1.26
SREBF1-207ENST00000447641 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.17□□□□□ -1.26
SREBF1-207ENST00000447641 SPINK7P58062 85 aa7.15□□□□□ -1.26
SREBF1-207ENST00000447641 CYSTM1Q9H1C7 97 aa7.13□□□□□ -1.27
SREBF1-207ENST00000447641 A8MUN3 132 aa7.1□□□□□ -1.27
SREBF1-207ENST00000447641 RBM12B-AS1Q9P1G2 102 aa7.08□□□□□ -1.28
SREBF1-207ENST00000447641 FCGBPQ9Y6R7 5405 aaPredicted RBP7.08□□□□□ -1.28
SREBF1-207ENST00000447641 ACYP2P14621 99 aa7.06□□□□□ -1.28
SREBF1-207ENST00000447641 M0R2T5 61 aa7.04□□□□□ -1.28
SREBF1-207ENST00000447641 SERP1Q9Y6X1 66 aa7.03□□□□□ -1.28
SREBF1-207ENST00000447641 DMAC1Q96GE9 116 aa7.02□□□□□ -1.29
SREBF1-207ENST00000447641 RPS28P62857 69 aaKnown RBP7.01□□□□□ -1.29
SREBF1-207ENST00000447641 C4orf26Q17RF5 130 aa6.98□□□□□ -1.29
SREBF1-207ENST00000447641 CHKB-CPT1BH3BT56 60 aa6.97□□□□□ -1.29
SREBF1-207ENST00000447641 SPTSSBQ8NFR3 76 aa6.95□□□□□ -1.3
SREBF1-207ENST00000447641 COA5Q86WW8 74 aa6.92□□□□□ -1.3
SREBF1-207ENST00000447641 KRTAP9-8Q9BYQ0 159 aa6.92□□□□□ -1.3
SREBF1-207ENST00000447641 H1FX-AS1Q4G0G2 97 aa6.88□□□□□ -1.31
SREBF1-207ENST00000447641 SMIM26A0A096LP01 95 aa6.86□□□□□ -1.31
SREBF1-207ENST00000447641 V9GYY9 64 aa6.84□□□□□ -1.31
SREBF1-207ENST00000447641 MACF1Q9UPN3 7388 aaKnown RBP6.83□□□□□ -1.32
SREBF1-207ENST00000447641 KRTAP19-1Q8IUB9 90 aa6.83□□□□□ -1.32
SREBF1-207ENST00000447641 KRTAP3-1Q9BYR8 98 aa6.82□□□□□ -1.32
SREBF1-207ENST00000447641 SYNE2Q8WXH0 6885 aaKnown RBP6.82□□□□□ -1.32
SREBF1-207ENST00000447641 MT2AP02795 61 aa6.81□□□□□ -1.32
SREBF1-207ENST00000447641 LCE2BO14633 110 aa6.8□□□□□ -1.32
SREBF1-207ENST00000447641 S4R3F8 94 aa6.8□□□□□ -1.32
SREBF1-207ENST00000447641 MT1FP04733 61 aa6.76□□□□□ -1.33
SREBF1-207ENST00000447641 SEC61GP60059 68 aa6.72□□□□□ -1.33
SREBF1-207ENST00000447641 PRR15LQ9BU68 103 aa6.72□□□□□ -1.33
SREBF1-207ENST00000447641 Q1T7F1 81 aa6.71□□□□□ -1.34
SREBF1-207ENST00000447641 KRTAP10-10P60014 251 aa6.7□□□□□ -1.34
SREBF1-207ENST00000447641 CSAG1Q6PB30 78 aa6.7□□□□□ -1.34
SREBF1-207ENST00000447641 KRTAP9-3Q9BYQ3 159 aa6.7□□□□□ -1.34
SREBF1-207ENST00000447641 LCA10Q71F78 164 aa6.68□□□□□ -1.34
SREBF1-207ENST00000447641 LINC01558Q9Y6Z2 57 aa6.66□□□□□ -1.34
SREBF1-207ENST00000447641 A0A1B0GU69 56 aa6.63□□□□□ -1.35
SREBF1-207ENST00000447641 KRTAP3-3Q9BYR6 98 aa6.62□□□□□ -1.35
SREBF1-207ENST00000447641 KRTAP19-6Q3LI70 58 aa6.59□□□□□ -1.35
SREBF1-207ENST00000447641 H0YAA0 97 aa6.54□□□□□ -1.36
SREBF1-207ENST00000447641 MUC12Q9UKN1 5478 aa6.53□□□□□ -1.36
SREBF1-207ENST00000447641 KRTAP6-3Q3LI67 103 aa6.52□□□□□ -1.37
SREBF1-207ENST00000447641 PSPHP1O15172 72 aa6.51□□□□□ -1.37
SREBF1-207ENST00000447641 UQCR11O14957 56 aa6.44□□□□□ -1.38
SREBF1-207ENST00000447641 Q5VV11 94 aa6.44□□□□□ -1.38
SREBF1-207ENST00000447641 ADM2Q7Z4H4 148 aa6.44□□□□□ -1.38
SREBF1-207ENST00000447641 NEBP20929 6669 aa6.43□□□□□ -1.38
SREBF1-207ENST00000447641 A0A1B0GU33 70 aa6.42□□□□□ -1.38
SREBF1-207ENST00000447641 A6NED7 52 aa6.42□□□□□ -1.38
SREBF1-207ENST00000447641 SPRR2GQ9BYE4 73 aa6.39□□□□□ -1.39
SREBF1-207ENST00000447641 SVIPQ8NHG7 77 aa6.36□□□□□ -1.39
SREBF1-207ENST00000447641 CRIPTQ9P021 101 aa6.36□□□□□ -1.39
SREBF1-207ENST00000447641 M0QZ58 72 aa6.35□□□□□ -1.39
SREBF1-207ENST00000447641 KRTAP3-2Q9BYR7 98 aa6.33□□□□□ -1.4
SREBF1-207ENST00000447641 MIR22HGQ0VDD5 57 aa6.32□□□□□ -1.4
SREBF1-207ENST00000447641 KRTAP19-8Q3LI54 63 aa6.32□□□□□ -1.4
SREBF1-207ENST00000447641 P0C880 135 aa6.3□□□□□ -1.4
SREBF1-207ENST00000447641 MDN1Q9NU22 5596 aa6.29□□□□□ -1.4
SREBF1-207ENST00000447641 CDC42SE1Q9NRR8 79 aa6.29□□□□□ -1.4
SREBF1-207ENST00000447641 R4GN34 69 aa6.29□□□□□ -1.4
SREBF1-207ENST00000447641 MT1BP07438 61 aa6.28□□□□□ -1.4
SREBF1-207ENST00000447641 SPATA8Q6RVD6 105 aa6.27□□□□□ -1.41
SREBF1-207ENST00000447641 BRK1Q8WUW1 75 aa6.26□□□□□ -1.41
SREBF1-207ENST00000447641 K7ERS5 55 aa6.23□□□□□ -1.41
SREBF1-207ENST00000447641 KRTAP20-1Q3LI63 56 aa6.23□□□□□ -1.41
SREBF1-207ENST00000447641 KMT2DO14686 5537 aa6.19□□□□□ -1.42
SREBF1-207ENST00000447641 PRO0628Q9UI54 55 aa6.14□□□□□ -1.43
SREBF1-207ENST00000447641 A6NN06 94 aa6.1□□□□□ -1.43
SREBF1-207ENST00000447641 KRTAP13-4Q3LI77 160 aa6.1□□□□□ -1.43
SREBF1-207ENST00000447641 A0A0D9SG42 100 aa6.09□□□□□ -1.43
SREBF1-207ENST00000447641 KRTAP5-9P26371 169 aa6.09□□□□□ -1.43
SREBF1-207ENST00000447641 KRTAP10-5P60370 271 aa6.09□□□□□ -1.43
SREBF1-207ENST00000447641 LINC01554Q52M75 96 aa6.09□□□□□ -1.43
SREBF1-207ENST00000447641 A8MU10 97 aa6.06□□□□□ -1.44
SREBF1-207ENST00000447641 SPINT4Q6UDR6 99 aa6.02□□□□□ -1.45
SREBF1-207ENST00000447641 PLAC4Q8WY50 150 aa5.98□□□□□ -1.45
SREBF1-207ENST00000447641 KRTAP12-1P59990 96 aa5.96□□□□□ -1.46
SREBF1-207ENST00000447641 PMAIP1Q13794 54 aa5.96□□□□□ -1.46
SREBF1-207ENST00000447641 MT1XP80297 61 aa5.94□□□□□ -1.46
SREBF1-207ENST00000447641 KRTAP2-3P0C7H8 128 aa5.92□□□□□ -1.46
SREBF1-207ENST00000447641 KRTAP2-4Q9BYR9 128 aa5.92□□□□□ -1.46
SREBF1-207ENST00000447641 KRTAP12-2P59991 146 aa5.91□□□□□ -1.46
SREBF1-207ENST00000447641 CAMK2N1Q7Z7J9 78 aa5.91□□□□□ -1.46
SREBF1-207ENST00000447641 PRO2289Q9P1D8 64 aa5.89□□□□□ -1.47
SREBF1-207ENST00000447641 ROMO1P60602 79 aa5.8□□□□□ -1.48
SREBF1-207ENST00000447641 SPRR2EP22531 72 aa5.78□□□□□ -1.48
SREBF1-207ENST00000447641 SPRR2BP35325 72 aa5.78□□□□□ -1.48
SREBF1-207ENST00000447641 SPRR2AP35326 72 aa5.78□□□□□ -1.48
SREBF1-207ENST00000447641 SPRR2FQ96RM1 72 aa5.75□□□□□ -1.49
SREBF1-207ENST00000447641 KRTAP2-2Q9BYT5 123 aa5.72□□□□□ -1.49
SREBF1-207ENST00000447641 KRTAP2-1Q9BYU5 128 aa5.72□□□□□ -1.49
SREBF1-207ENST00000447641 KTN1-AS1Q86SY8 53 aa5.7□□□□□ -1.5
SREBF1-207ENST00000447641 LCE1AQ5T7P2 110 aa5.68□□□□□ -1.5
SREBF1-207ENST00000447641 KRTAP10-7P60409 375 aaPredicted RBP5.65□□□□□ -1.5
SREBF1-207ENST00000447641 KRTAP10-12P60413 245 aa5.65□□□□□ -1.5
SREBF1-207ENST00000447641 KRTAP25-1Q3LHN0 102 aa5.65□□□□□ -1.5
SREBF1-207ENST00000447641 TNP1P09430 55 aa5.63□□□□□ -1.51
SREBF1-207ENST00000447641 C10orf95Q9H7T3 257 aa5.6□□□□□ -1.51
SREBF1-207ENST00000447641 KRTAP4-8A0A0G2JLE6 195 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms