RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 LCA10Q71F78 164 aa10.39□□□□□ -0.75
APOE-204ENST00000446996 KRTAP9-3Q9BYQ3 159 aa10.35□□□□□ -0.75
APOE-204ENST00000446996 USH2AO75445 5202 aa10.3□□□□□ -0.76
APOE-204ENST00000446996 KRTAP3-3Q9BYR6 98 aa10.3□□□□□ -0.76
APOE-204ENST00000446996 SSPOA2VEC9 5147 aa10.25□□□□□ -0.77
APOE-204ENST00000446996 NDUFC1O43677 76 aa10.21□□□□□ -0.77
APOE-204ENST00000446996 DMAC1Q96GE9 116 aa10.19□□□□□ -0.78
APOE-204ENST00000446996 LCE2BO14633 110 aa10.18□□□□□ -0.78
APOE-204ENST00000446996 SERP2Q8N6R1 65 aa10.18□□□□□ -0.78
APOE-204ENST00000446996 H0YAA0 97 aa10.08□□□□□ -0.8
APOE-204ENST00000446996 SNURFQ9Y675 71 aa10.07□□□□□ -0.8
APOE-204ENST00000446996 C20orf197Q8N268 126 aa10.05□□□□□ -0.8
APOE-204ENST00000446996 ACYP2P14621 99 aa10.04□□□□□ -0.8
APOE-204ENST00000446996 FCGBPQ9Y6R7 5405 aaPredicted RBP10.02□□□□□ -0.81
APOE-204ENST00000446996 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.01□□□□□ -0.81
APOE-204ENST00000446996 SPANXA2-OT1Q8N9U9 137 aa10□□□□□ -0.81
APOE-204ENST00000446996 COX7CP15954 63 aa9.98□□□□□ -0.81
APOE-204ENST00000446996 CRIPTQ9P021 101 aa9.98□□□□□ -0.81
APOE-204ENST00000446996 KRTAP19-1Q8IUB9 90 aa9.97□□□□□ -0.81
APOE-204ENST00000446996 SPRR2GQ9BYE4 73 aa9.95□□□□□ -0.82
APOE-204ENST00000446996 KRTAP9-7A8MTY7 169 aa9.92□□□□□ -0.82
APOE-204ENST00000446996 ADM2Q7Z4H4 148 aa9.88□□□□□ -0.83
APOE-204ENST00000446996 SPTSSBQ8NFR3 76 aa9.87□□□□□ -0.83
APOE-204ENST00000446996 KRTAP19-8Q3LI54 63 aa9.83□□□□□ -0.84
APOE-204ENST00000446996 KRTAP19-6Q3LI70 58 aa9.82□□□□□ -0.84
APOE-204ENST00000446996 CHKB-CPT1BH3BT56 60 aa9.8□□□□□ -0.84
APOE-204ENST00000446996 ANAPC13Q9BS18 74 aa9.78□□□□□ -0.84
APOE-204ENST00000446996 Q5VV11 94 aa9.77□□□□□ -0.85
APOE-204ENST00000446996 MACF1Q9UPN3 7388 aaKnown RBP9.73□□□□□ -0.85
APOE-204ENST00000446996 MT1BP07438 61 aa9.73□□□□□ -0.85
APOE-204ENST00000446996 H7BZZ5 65 aa9.72□□□□□ -0.85
APOE-204ENST00000446996 KRTAP3-2Q9BYR7 98 aa9.71□□□□□ -0.86
APOE-204ENST00000446996 P0C880 135 aa9.7□□□□□ -0.86
APOE-204ENST00000446996 SYNE2Q8WXH0 6885 aaKnown RBP9.68□□□□□ -0.86
APOE-204ENST00000446996 CYSTM1Q9H1C7 97 aa9.66□□□□□ -0.86
APOE-204ENST00000446996 R4GN34 69 aa9.63□□□□□ -0.87
APOE-204ENST00000446996 COA5Q86WW8 74 aa9.62□□□□□ -0.87
APOE-204ENST00000446996 CCDC179H3BU77 68 aa9.55□□□□□ -0.88
APOE-204ENST00000446996 M0QZ58 72 aa9.54□□□□□ -0.88
APOE-204ENST00000446996 A6NN06 94 aa9.48□□□□□ -0.89
APOE-204ENST00000446996 KRTAP10-5P60370 271 aa9.46□□□□□ -0.9
APOE-204ENST00000446996 ATP5EP56381 51 aaPredicted RBP9.43□□□□□ -0.9
APOE-204ENST00000446996 PLAC4Q8WY50 150 aa9.42□□□□□ -0.9
APOE-204ENST00000446996 SEC61GP60059 68 aa9.36□□□□□ -0.91
APOE-204ENST00000446996 SERP1Q9Y6X1 66 aa9.34□□□□□ -0.91
APOE-204ENST00000446996 LINC01554Q52M75 96 aa9.33□□□□□ -0.92
APOE-204ENST00000446996 TMEM258P61165 79 aa9.28□□□□□ -0.92
APOE-204ENST00000446996 KRTAP6-3Q3LI67 103 aa9.28□□□□□ -0.92
APOE-204ENST00000446996 PRO2289Q9P1D8 64 aa9.28□□□□□ -0.92
APOE-204ENST00000446996 MT1XP80297 61 aa9.21□□□□□ -0.94
APOE-204ENST00000446996 KRTAP13-4Q3LI77 160 aa9.2□□□□□ -0.94
APOE-204ENST00000446996 A0A1B0GU33 70 aa9.15□□□□□ -0.94
APOE-204ENST00000446996 A0A1B0GU69 56 aa9.14□□□□□ -0.95
APOE-204ENST00000446996 NEBP20929 6669 aa9.12□□□□□ -0.95
APOE-204ENST00000446996 MUC12Q9UKN1 5478 aa9.08□□□□□ -0.96
APOE-204ENST00000446996 LINC01558Q9Y6Z2 57 aa9.03□□□□□ -0.96
APOE-204ENST00000446996 PRR15LQ9BU68 103 aa9.02□□□□□ -0.97
APOE-204ENST00000446996 SPATA8Q6RVD6 105 aa9.01□□□□□ -0.97
APOE-204ENST00000446996 KRTAP12-2P59991 146 aa8.99□□□□□ -0.97
APOE-204ENST00000446996 A0A0D9SG42 100 aa8.93□□□□□ -0.98
APOE-204ENST00000446996 SMIM26A0A096LP01 95 aa8.92□□□□□ -0.98
APOE-204ENST00000446996 CAMK2N1Q7Z7J9 78 aa8.89□□□□□ -0.99
APOE-204ENST00000446996 KMT2DO14686 5537 aa8.85□□□□□ -0.99
APOE-204ENST00000446996 MDN1Q9NU22 5596 aa8.84□□□□□ -0.99
APOE-204ENST00000446996 KRTAP5-9P26371 169 aa8.84□□□□□ -0.99
APOE-204ENST00000446996 KRTAP12-1P59990 96 aa8.82□□□□□ -1
APOE-204ENST00000446996 SPINT4Q6UDR6 99 aa8.82□□□□□ -1
APOE-204ENST00000446996 KRTAP10-12P60413 245 aa8.79□□□□□ -1
APOE-204ENST00000446996 PCP4P48539 62 aa8.78□□□□□ -1
APOE-204ENST00000446996 KRTAP10-7P60409 375 aaPredicted RBP8.77□□□□□ -1.01
APOE-204ENST00000446996 V9GYY9 64 aa8.76□□□□□ -1.01
APOE-204ENST00000446996 A8MU10 97 aa8.74□□□□□ -1.01
APOE-204ENST00000446996 UQCR11O14957 56 aa8.73□□□□□ -1.01
APOE-204ENST00000446996 KRTAP8-1Q8IUC2 63 aa8.71□□□□□ -1.02
APOE-204ENST00000446996 Q1T7F1 81 aa8.69□□□□□ -1.02
APOE-204ENST00000446996 KRTAP20-1Q3LI63 56 aa8.67□□□□□ -1.02
APOE-204ENST00000446996 KRTAP4-8A0A0G2JLE6 195 aa8.65□□□□□ -1.02
APOE-204ENST00000446996 KRTAP4-8Q9BYQ9 185 aa8.65□□□□□ -1.02
APOE-204ENST00000446996 RPS28P62857 69 aaKnown RBP8.61□□□□□ -1.03
APOE-204ENST00000446996 SPRR2FQ96RM1 72 aa8.59□□□□□ -1.03
APOE-204ENST00000446996 MIR22HGQ0VDD5 57 aa8.53□□□□□ -1.04
APOE-204ENST00000446996 PSPHP1O15172 72 aa8.52□□□□□ -1.05
APOE-204ENST00000446996 SPRR2EP22531 72 aa8.41□□□□□ -1.06
APOE-204ENST00000446996 SPRR2BP35325 72 aa8.41□□□□□ -1.06
APOE-204ENST00000446996 SPRR2AP35326 72 aa8.41□□□□□ -1.06
APOE-204ENST00000446996 C10orf95Q9H7T3 257 aa8.4□□□□□ -1.06
APOE-204ENST00000446996 KRTAP2-3P0C7H8 128 aa8.38□□□□□ -1.07
APOE-204ENST00000446996 KRTAP2-4Q9BYR9 128 aa8.38□□□□□ -1.07
APOE-204ENST00000446996 TNP1P09430 55 aa8.35□□□□□ -1.07
APOE-204ENST00000446996 K7ERS5 55 aa8.34□□□□□ -1.07
APOE-204ENST00000446996 LCE1AQ5T7P2 110 aa8.34□□□□□ -1.07
APOE-204ENST00000446996 A6NED7 52 aa8.29□□□□□ -1.08
APOE-204ENST00000446996 KRTAP19-7Q3SYF9 63 aa8.23□□□□□ -1.09
APOE-204ENST00000446996 MT1EP04732 61 aa8.15□□□□□ -1.1
APOE-204ENST00000446996 SPRR2DP22532 72 aa8.13□□□□□ -1.11
APOE-204ENST00000446996 LCE3AQ5TA76 89 aa8.11□□□□□ -1.11
APOE-204ENST00000446996 KRTAP19-5Q3LI72 72 aa8.1□□□□□ -1.11
APOE-204ENST00000446996 KRTAP2-2Q9BYT5 123 aa8.1□□□□□ -1.11
APOE-204ENST00000446996 KRTAP2-1Q9BYU5 128 aa8.1□□□□□ -1.11
APOE-204ENST00000446996 KRTAP25-1Q3LHN0 102 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 448 ms