RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 K7ERS5 55 aa7.41□□□□□ -1.22
ERCC3-203ENST00000445889 FAT3Q8TDW7 4589 aa7.38□□□□□ -1.23
ERCC3-203ENST00000445889 KRTAP13-4Q3LI77 160 aa7.36□□□□□ -1.23
ERCC3-203ENST00000445889 A0A1B0GVY2 172 aa7.35□□□□□ -1.23
ERCC3-203ENST00000445889 KRTAP10-8P60410 259 aa7.35□□□□□ -1.23
ERCC3-203ENST00000445889 ROMO1P60602 79 aa7.34□□□□□ -1.23
ERCC3-203ENST00000445889 LPAP08519 4548 aa7.33□□□□□ -1.24
ERCC3-203ENST00000445889 KRTAP3-3Q9BYR6 98 aa7.33□□□□□ -1.24
ERCC3-203ENST00000445889 KRTAP10-6P60371 365 aaPredicted RBP7.32□□□□□ -1.24
ERCC3-203ENST00000445889 TNXBP22105 4242 aa7.3□□□□□ -1.24
ERCC3-203ENST00000445889 RYR2Q92736 4967 aa7.28□□□□□ -1.24
ERCC3-203ENST00000445889 RPL37P61927 97 aaKnown RBP7.28□□□□□ -1.24
ERCC3-203ENST00000445889 P0C880 135 aa7.26□□□□□ -1.25
ERCC3-203ENST00000445889 KRTAP3-2Q9BYR7 98 aa7.24□□□□□ -1.25
ERCC3-203ENST00000445889 C10orf95Q9H7T3 257 aa7.23□□□□□ -1.25
ERCC3-203ENST00000445889 XP32Q5T750 250 aa7.21□□□□□ -1.26
ERCC3-203ENST00000445889 S4R3F8 94 aa7.21□□□□□ -1.26
ERCC3-203ENST00000445889 TPRXLQ17RH7 258 aa7.18□□□□□ -1.26
ERCC3-203ENST00000445889 LRP2P98164 4655 aa7.17□□□□□ -1.26
ERCC3-203ENST00000445889 Q5VSD8 79 aa7.17□□□□□ -1.26
ERCC3-203ENST00000445889 KRTAP21-3Q3LHN1 58 aa7.16□□□□□ -1.26
ERCC3-203ENST00000445889 KRTAP17-1Q9BYP8 105 aa7.16□□□□□ -1.26
ERCC3-203ENST00000445889 SPINT4Q6UDR6 99 aa7.14□□□□□ -1.27
ERCC3-203ENST00000445889 KIAA1109Q2LD37 5005 aa7.13□□□□□ -1.27
ERCC3-203ENST00000445889 KRTAP12-2P59991 146 aa7.12□□□□□ -1.27
ERCC3-203ENST00000445889 RYR3Q15413 4870 aa7.09□□□□□ -1.28
ERCC3-203ENST00000445889 RYR1P21817 5038 aa7.04□□□□□ -1.28
ERCC3-203ENST00000445889 KRTAP12-1P59990 96 aa6.99□□□□□ -1.29
ERCC3-203ENST00000445889 ABCA13Q86UQ4 5058 aa6.97□□□□□ -1.29
ERCC3-203ENST00000445889 MT1HL1P0DM35 61 aa6.96□□□□□ -1.3
ERCC3-203ENST00000445889 NDUFAF8A1L188 74 aa6.9□□□□□ -1.3
ERCC3-203ENST00000445889 KRTAP15-1Q3LI76 137 aa6.87□□□□□ -1.31
ERCC3-203ENST00000445889 EPPK1P58107 5090 aaKnown RBP6.86□□□□□ -1.31
ERCC3-203ENST00000445889 M0QZ58 72 aa6.83□□□□□ -1.32
ERCC3-203ENST00000445889 LORP23490 312 aaPredicted RBP6.77□□□□□ -1.33
ERCC3-203ENST00000445889 R4GN34 69 aa6.76□□□□□ -1.33
ERCC3-203ENST00000445889 MUC2Q02817 5179 aa6.75□□□□□ -1.33
ERCC3-203ENST00000445889 KRTAP4-5Q9BYR2 181 aa6.75□□□□□ -1.33
ERCC3-203ENST00000445889 KRTAP4-1Q9BYQ7 146 aa6.64□□□□□ -1.35
ERCC3-203ENST00000445889 MUC17Q685J3 4493 aa6.64□□□□□ -1.35
ERCC3-203ENST00000445889 PLAC4Q8WY50 150 aa6.53□□□□□ -1.36
ERCC3-203ENST00000445889 SEC61BP60468 96 aaKnown RBP6.51□□□□□ -1.37
ERCC3-203ENST00000445889 HERC2O95714 4834 aa6.47□□□□□ -1.37
ERCC3-203ENST00000445889 CAMK2N1Q7Z7J9 78 aa6.47□□□□□ -1.37
ERCC3-203ENST00000445889 J3QL48 77 aa6.44□□□□□ -1.38
ERCC3-203ENST00000445889 FAT4Q6V0I7 4981 aa6.39□□□□□ -1.39
ERCC3-203ENST00000445889 KRTAP19-2Q3LHN2 52 aa6.39□□□□□ -1.39
ERCC3-203ENST00000445889 PCLOQ9Y6V0 5065 aa6.38□□□□□ -1.39
ERCC3-203ENST00000445889 HERC1Q15751 4861 aa6.31□□□□□ -1.4
ERCC3-203ENST00000445889 LUZP6Q538Z0 58 aa6.28□□□□□ -1.4
ERCC3-203ENST00000445889 PP632Q6XCG6 107 aa6.26□□□□□ -1.41
ERCC3-203ENST00000445889 FLGP20930 4061 aaPredicted RBP6.25□□□□□ -1.41
ERCC3-203ENST00000445889 A0A0A0MQY5 61 aa6.18□□□□□ -1.42
ERCC3-203ENST00000445889 RNF213Q63HN8 5207 aa6.17□□□□□ -1.42
ERCC3-203ENST00000445889 TNP1P09430 55 aa6.16□□□□□ -1.42
ERCC3-203ENST00000445889 BIRC6Q9NR09 4857 aa6.15□□□□□ -1.43
ERCC3-203ENST00000445889 HMCN2Q8NDA2 5059 aa6.05□□□□□ -1.44
ERCC3-203ENST00000445889 M0R2T5 61 aa6.02□□□□□ -1.45
ERCC3-203ENST00000445889 UBR4Q5T4S7 5183 aa5.99□□□□□ -1.45
ERCC3-203ENST00000445889 LCE2CQ5TA81 110 aa5.98□□□□□ -1.45
ERCC3-203ENST00000445889 KRTAP19-1Q8IUB9 90 aa5.95□□□□□ -1.46
ERCC3-203ENST00000445889 SPRR5A0A1B0GTR4 108 aa5.91□□□□□ -1.46
ERCC3-203ENST00000445889 KRTAP23-1A1A580 65 aa5.91□□□□□ -1.46
ERCC3-203ENST00000445889 LCE3AQ5TA76 89 aa5.9□□□□□ -1.47
ERCC3-203ENST00000445889 SPRR2GQ9BYE4 73 aa5.88□□□□□ -1.47
ERCC3-203ENST00000445889 KRTAP10-10P60014 251 aa5.86□□□□□ -1.47
ERCC3-203ENST00000445889 MT1FP04733 61 aa5.82□□□□□ -1.48
ERCC3-203ENST00000445889 MT1HP80294 61 aa5.82□□□□□ -1.48
ERCC3-203ENST00000445889 MT2AP02795 61 aa5.77□□□□□ -1.49
ERCC3-203ENST00000445889 KRTAP9-8Q9BYQ0 159 aa5.71□□□□□ -1.5
ERCC3-203ENST00000445889 KRTAP10-5P60370 271 aa5.63□□□□□ -1.51
ERCC3-203ENST00000445889 USH2AO75445 5202 aa5.62□□□□□ -1.51
ERCC3-203ENST00000445889 MT1BP07438 61 aa5.61□□□□□ -1.51
ERCC3-203ENST00000445889 MT1XP80297 61 aa5.61□□□□□ -1.51
ERCC3-203ENST00000445889 KMT2DO14686 5537 aa5.6□□□□□ -1.51
ERCC3-203ENST00000445889 KRTAP8-1Q8IUC2 63 aa5.6□□□□□ -1.51
ERCC3-203ENST00000445889 KRTAP10-7P60409 375 aaPredicted RBP5.57□□□□□ -1.52
ERCC3-203ENST00000445889 KRTAP12-3P60328 96 aa5.55□□□□□ -1.52
ERCC3-203ENST00000445889 KRTAP19-8Q3LI54 63 aa5.55□□□□□ -1.52
ERCC3-203ENST00000445889 KRTAP10-12P60413 245 aa5.54□□□□□ -1.52
ERCC3-203ENST00000445889 KRTAP9-3Q9BYQ3 159 aa5.43□□□□□ -1.54
ERCC3-203ENST00000445889 PRO2289Q9P1D8 64 aa5.42□□□□□ -1.54
ERCC3-203ENST00000445889 INE1O15225 51 aa5.33□□□□□ -1.56
ERCC3-203ENST00000445889 KRTAP19-5Q3LI72 72 aa5.33□□□□□ -1.56
ERCC3-203ENST00000445889 KRTAP4-8A0A0G2JLE6 195 aa5.3□□□□□ -1.56
ERCC3-203ENST00000445889 KRTAP4-8Q9BYQ9 185 aa5.3□□□□□ -1.56
ERCC3-203ENST00000445889 LCE2BO14633 110 aa5.28□□□□□ -1.56
ERCC3-203ENST00000445889 LCE3CQ5T5A8 94 aa5.21□□□□□ -1.58
ERCC3-203ENST00000445889 FSIP2Q5CZC0 6907 aa5.21□□□□□ -1.58
ERCC3-203ENST00000445889 KRTAP4-7Q9BYR0 210 aa5.18□□□□□ -1.58
ERCC3-203ENST00000445889 KRTAP9-6A8MVA2 160 aa5.16□□□□□ -1.58
ERCC3-203ENST00000445889 KRTAP19-7Q3SYF9 63 aa5□□□□□ -1.61
ERCC3-203ENST00000445889 LCE2AQ5TA79 106 aaPredicted RBP4.93□□□□□ -1.62
ERCC3-203ENST00000445889 SSPOA2VEC9 5147 aa4.89□□□□□ -1.63
ERCC3-203ENST00000445889 DSTQ03001 7570 aaKnown RBP4.88□□□□□ -1.63
ERCC3-203ENST00000445889 KRTAP2-3P0C7H8 128 aa4.87□□□□□ -1.63
ERCC3-203ENST00000445889 KRTAP2-4Q9BYR9 128 aa4.87□□□□□ -1.63
ERCC3-203ENST00000445889 KRTAP2-1Q9BYU5 128 aa4.87□□□□□ -1.63
ERCC3-203ENST00000445889 MUC12Q9UKN1 5478 aa4.86□□□□□ -1.63
ERCC3-203ENST00000445889 MT1LQ93083 61 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 2042 ms