RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 ROMO1P60602 79 aa9.08□□□□□ -0.96
LAPTM4B-201ENST00000445593 A8MUU9 505 aa9.05□□□□□ -0.96
LAPTM4B-201ENST00000445593 KRTAP10-8P60410 259 aa9.05□□□□□ -0.96
LAPTM4B-201ENST00000445593 C20orf166-AS1Q96NR2 134 aa9.05□□□□□ -0.96
LAPTM4B-201ENST00000445593 UQCR11O14957 56 aa8.99□□□□□ -0.97
LAPTM4B-201ENST00000445593 SPATA8Q6RVD6 105 aa8.95□□□□□ -0.98
LAPTM4B-201ENST00000445593 P0C880 135 aa8.94□□□□□ -0.98
LAPTM4B-201ENST00000445593 KRTAP4-5Q9BYR2 181 aa8.9□□□□□ -0.98
LAPTM4B-201ENST00000445593 MT1HL1P0DM35 61 aa8.9□□□□□ -0.98
LAPTM4B-201ENST00000445593 KRTAP3-1Q9BYR8 98 aa8.88□□□□□ -0.99
LAPTM4B-201ENST00000445593 XP32Q5T750 250 aa8.86□□□□□ -0.99
LAPTM4B-201ENST00000445593 NDUFAF8A1L188 74 aa8.85□□□□□ -0.99
LAPTM4B-201ENST00000445593 KRTAP25-1Q3LHN0 102 aa8.85□□□□□ -0.99
LAPTM4B-201ENST00000445593 ABCA13Q86UQ4 5058 aa8.84□□□□□ -0.99
LAPTM4B-201ENST00000445593 SPINT4Q6UDR6 99 aa8.82□□□□□ -1
LAPTM4B-201ENST00000445593 LRP2P98164 4655 aa8.81□□□□□ -1
LAPTM4B-201ENST00000445593 LPAP08519 4548 aa8.8□□□□□ -1
LAPTM4B-201ENST00000445593 RPL37P61927 97 aaKnown RBP8.79□□□□□ -1
LAPTM4B-201ENST00000445593 COX6B2Q6YFQ2 88 aa8.73□□□□□ -1.01
LAPTM4B-201ENST00000445593 HERC2O95714 4834 aa8.64□□□□□ -1.03
LAPTM4B-201ENST00000445593 J3QL48 77 aa8.59□□□□□ -1.03
LAPTM4B-201ENST00000445593 H0YAA0 97 aa8.54□□□□□ -1.04
LAPTM4B-201ENST00000445593 TPRXLQ17RH7 258 aa8.53□□□□□ -1.04
LAPTM4B-201ENST00000445593 S4R3F8 94 aa8.51□□□□□ -1.05
LAPTM4B-201ENST00000445593 A0A1B0GU33 70 aa8.51□□□□□ -1.05
LAPTM4B-201ENST00000445593 KRTAP3-3Q9BYR6 98 aa8.49□□□□□ -1.05
LAPTM4B-201ENST00000445593 C10orf95Q9H7T3 257 aa8.49□□□□□ -1.05
LAPTM4B-201ENST00000445593 H1FX-AS1Q4G0G2 97 aa8.45□□□□□ -1.06
LAPTM4B-201ENST00000445593 BIRC6Q9NR09 4857 aa8.4□□□□□ -1.06
LAPTM4B-201ENST00000445593 MUC2Q02817 5179 aa8.39□□□□□ -1.07
LAPTM4B-201ENST00000445593 A0A0D9SG42 100 aa8.36□□□□□ -1.07
LAPTM4B-201ENST00000445593 LUZP6Q538Z0 58 aa8.36□□□□□ -1.07
LAPTM4B-201ENST00000445593 K7ERS5 55 aa8.35□□□□□ -1.07
LAPTM4B-201ENST00000445593 HERC1Q15751 4861 aa8.35□□□□□ -1.07
LAPTM4B-201ENST00000445593 KRTAP10-6P60371 365 aaPredicted RBP8.33□□□□□ -1.08
LAPTM4B-201ENST00000445593 PCLOQ9Y6V0 5065 aa8.32□□□□□ -1.08
LAPTM4B-201ENST00000445593 KRTAP13-4Q3LI77 160 aa8.3□□□□□ -1.08
LAPTM4B-201ENST00000445593 KRTAP4-1Q9BYQ7 146 aa8.29□□□□□ -1.08
LAPTM4B-201ENST00000445593 KRTAP3-2Q9BYR7 98 aa8.28□□□□□ -1.08
LAPTM4B-201ENST00000445593 SEC61BP60468 96 aaKnown RBP8.27□□□□□ -1.09
LAPTM4B-201ENST00000445593 MUC17Q685J3 4493 aa8.2□□□□□ -1.1
LAPTM4B-201ENST00000445593 KRTAP15-1Q3LI76 137 aa8.19□□□□□ -1.1
LAPTM4B-201ENST00000445593 HMCN2Q8NDA2 5059 aa8.04□□□□□ -1.12
LAPTM4B-201ENST00000445593 FAT4Q6V0I7 4981 aa8□□□□□ -1.13
LAPTM4B-201ENST00000445593 KRTAP12-2P59991 146 aa8□□□□□ -1.13
LAPTM4B-201ENST00000445593 RNF213Q63HN8 5207 aa7.99□□□□□ -1.13
LAPTM4B-201ENST00000445593 M0QZ58 72 aa7.99□□□□□ -1.13
LAPTM4B-201ENST00000445593 LORP23490 312 aaPredicted RBP7.96□□□□□ -1.13
LAPTM4B-201ENST00000445593 R4GN34 69 aa7.95□□□□□ -1.14
LAPTM4B-201ENST00000445593 UBR4Q5T4S7 5183 aa7.93□□□□□ -1.14
LAPTM4B-201ENST00000445593 KRTAP19-2Q3LHN2 52 aa7.92□□□□□ -1.14
LAPTM4B-201ENST00000445593 KRTAP12-1P59990 96 aa7.89□□□□□ -1.15
LAPTM4B-201ENST00000445593 FLGP20930 4061 aaPredicted RBP7.82□□□□□ -1.16
LAPTM4B-201ENST00000445593 M0R2T5 61 aa7.69□□□□□ -1.18
LAPTM4B-201ENST00000445593 LCE2CQ5TA81 110 aa7.63□□□□□ -1.19
LAPTM4B-201ENST00000445593 PLAC4Q8WY50 150 aa7.59□□□□□ -1.19
LAPTM4B-201ENST00000445593 CAMK2N1Q7Z7J9 78 aa7.55□□□□□ -1.2
LAPTM4B-201ENST00000445593 MT1HP80294 61 aa7.49□□□□□ -1.21
LAPTM4B-201ENST00000445593 KRTAP10-10P60014 251 aa7.38□□□□□ -1.23
LAPTM4B-201ENST00000445593 MT1FP04733 61 aa7.32□□□□□ -1.24
LAPTM4B-201ENST00000445593 MT2AP02795 61 aa7.3□□□□□ -1.24
LAPTM4B-201ENST00000445593 KRTAP19-1Q8IUB9 90 aa7.29□□□□□ -1.24
LAPTM4B-201ENST00000445593 KRTAP9-8Q9BYQ0 159 aa7.23□□□□□ -1.25
LAPTM4B-201ENST00000445593 SPRR2GQ9BYE4 73 aa7.2□□□□□ -1.26
LAPTM4B-201ENST00000445593 TNP1P09430 55 aa7.1□□□□□ -1.27
LAPTM4B-201ENST00000445593 USH2AO75445 5202 aa7.04□□□□□ -1.28
LAPTM4B-201ENST00000445593 MT1BP07438 61 aa6.95□□□□□ -1.3
LAPTM4B-201ENST00000445593 PP632Q6XCG6 107 aa6.93□□□□□ -1.3
LAPTM4B-201ENST00000445593 KRTAP9-3Q9BYQ3 159 aa6.93□□□□□ -1.3
LAPTM4B-201ENST00000445593 KRTAP19-8Q3LI54 63 aa6.9□□□□□ -1.3
LAPTM4B-201ENST00000445593 PRO2289Q9P1D8 64 aa6.88□□□□□ -1.31
LAPTM4B-201ENST00000445593 LCE3AQ5TA76 89 aa6.84□□□□□ -1.31
LAPTM4B-201ENST00000445593 MT1XP80297 61 aa6.83□□□□□ -1.32
LAPTM4B-201ENST00000445593 KRTAP10-5P60370 271 aa6.83□□□□□ -1.32
LAPTM4B-201ENST00000445593 LCE2BO14633 110 aa6.78□□□□□ -1.32
LAPTM4B-201ENST00000445593 FSIP2Q5CZC0 6907 aa6.77□□□□□ -1.33
LAPTM4B-201ENST00000445593 LCE2AQ5TA79 106 aaPredicted RBP6.77□□□□□ -1.33
LAPTM4B-201ENST00000445593 KMT2DO14686 5537 aa6.73□□□□□ -1.33
LAPTM4B-201ENST00000445593 KRTAP10-7P60409 375 aaPredicted RBP6.71□□□□□ -1.34
LAPTM4B-201ENST00000445593 KRTAP10-12P60413 245 aa6.65□□□□□ -1.35
LAPTM4B-201ENST00000445593 KRTAP23-1A1A580 65 aa6.64□□□□□ -1.35
LAPTM4B-201ENST00000445593 KRTAP8-1Q8IUC2 63 aa6.49□□□□□ -1.37
LAPTM4B-201ENST00000445593 KRTAP12-3P60328 96 aa6.49□□□□□ -1.37
LAPTM4B-201ENST00000445593 KRTAP4-8A0A0G2JLE6 195 aa6.45□□□□□ -1.38
LAPTM4B-201ENST00000445593 KRTAP4-8Q9BYQ9 185 aa6.45□□□□□ -1.38
LAPTM4B-201ENST00000445593 SSPOA2VEC9 5147 aa6.43□□□□□ -1.38
LAPTM4B-201ENST00000445593 INE1O15225 51 aa6.43□□□□□ -1.38
LAPTM4B-201ENST00000445593 SPRR5A0A1B0GTR4 108 aa6.41□□□□□ -1.38
LAPTM4B-201ENST00000445593 KRTAP19-5Q3LI72 72 aa6.36□□□□□ -1.39
LAPTM4B-201ENST00000445593 KRTAP19-7Q3SYF9 63 aa6.08□□□□□ -1.44
LAPTM4B-201ENST00000445593 KRTAP4-7Q9BYR0 210 aa6.08□□□□□ -1.44
LAPTM4B-201ENST00000445593 FCGBPQ9Y6R7 5405 aaPredicted RBP6.06□□□□□ -1.44
LAPTM4B-201ENST00000445593 KRTAP19-6Q3LI70 58 aa6.04□□□□□ -1.44
LAPTM4B-201ENST00000445593 LCE3CQ5T5A8 94 aa6.04□□□□□ -1.44
LAPTM4B-201ENST00000445593 MUC12Q9UKN1 5478 aa6.03□□□□□ -1.44
LAPTM4B-201ENST00000445593 MT1EP04732 61 aa5.92□□□□□ -1.46
LAPTM4B-201ENST00000445593 KRTAP9-6A8MVA2 160 aa5.88□□□□□ -1.47
LAPTM4B-201ENST00000445593 MT1LQ93083 61 aa5.88□□□□□ -1.47
LAPTM4B-201ENST00000445593 MACF1Q9UPN3 7388 aaKnown RBP5.86□□□□□ -1.47
LAPTM4B-201ENST00000445593 DSTQ03001 7570 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms