RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 FLG2Q5D862 2391 aaPredicted RBP10.04□□□□□ -0.8
PMPCB-204ENST00000444457 COX6B2Q6YFQ2 88 aa10.03□□□□□ -0.8
PMPCB-204ENST00000444457 EPPK1P58107 5090 aaKnown RBP9.99□□□□□ -0.81
PMPCB-204ENST00000444457 FAT3Q8TDW7 4589 aa9.91□□□□□ -0.82
PMPCB-204ENST00000444457 TNXBP22105 4242 aa9.9□□□□□ -0.82
PMPCB-204ENST00000444457 HSPG2P98160 4391 aa9.89□□□□□ -0.83
PMPCB-204ENST00000444457 LRP1Q07954 4544 aaKnown RBP9.89□□□□□ -0.83
PMPCB-204ENST00000444457 KIAA1109Q2LD37 5005 aa9.87□□□□□ -0.83
PMPCB-204ENST00000444457 RPL37P61927 97 aaKnown RBP9.87□□□□□ -0.83
PMPCB-204ENST00000444457 KRTAP17-1Q9BYP8 105 aa9.86□□□□□ -0.83
PMPCB-204ENST00000444457 KRTAP10-8P60410 259 aa9.85□□□□□ -0.83
PMPCB-204ENST00000444457 TPRXLQ17RH7 258 aa9.85□□□□□ -0.83
PMPCB-204ENST00000444457 Q5VSD8 79 aa9.84□□□□□ -0.83
PMPCB-204ENST00000444457 SPINT4Q6UDR6 99 aa9.82□□□□□ -0.84
PMPCB-204ENST00000444457 RYR1P21817 5038 aa9.78□□□□□ -0.84
PMPCB-204ENST00000444457 KRTAP10-6P60371 365 aaPredicted RBP9.78□□□□□ -0.84
PMPCB-204ENST00000444457 KRTAP13-4Q3LI77 160 aa9.76□□□□□ -0.85
PMPCB-204ENST00000444457 KRTAP15-1Q3LI76 137 aa9.72□□□□□ -0.85
PMPCB-204ENST00000444457 A0A0D9SG42 100 aa9.69□□□□□ -0.86
PMPCB-204ENST00000444457 C10orf95Q9H7T3 257 aa9.68□□□□□ -0.86
PMPCB-204ENST00000444457 DMBT1Q9UGM3 2413 aaPredicted RBP9.68□□□□□ -0.86
PMPCB-204ENST00000444457 KRTAP3-3Q9BYR6 98 aa9.67□□□□□ -0.86
PMPCB-204ENST00000444457 KRTAP3-2Q9BYR7 98 aa9.66□□□□□ -0.86
PMPCB-204ENST00000444457 XP32Q5T750 250 aa9.66□□□□□ -0.86
PMPCB-204ENST00000444457 NDUFAF8A1L188 74 aa9.65□□□□□ -0.87
PMPCB-204ENST00000444457 MYCBP2O75592 4640 aa9.6□□□□□ -0.87
PMPCB-204ENST00000444457 KRTAP4-5Q9BYR2 181 aa9.59□□□□□ -0.87
PMPCB-204ENST00000444457 MT1HL1P0DM35 61 aa9.57□□□□□ -0.88
PMPCB-204ENST00000444457 S4R3F8 94 aa9.55□□□□□ -0.88
PMPCB-204ENST00000444457 KRTAP12-2P59991 146 aa9.49□□□□□ -0.89
PMPCB-204ENST00000444457 BIRC6Q9NR09 4857 aa9.47□□□□□ -0.89
PMPCB-204ENST00000444457 ABCA13Q86UQ4 5058 aa9.39□□□□□ -0.91
PMPCB-204ENST00000444457 KRTAP12-1P59990 96 aa9.39□□□□□ -0.91
PMPCB-204ENST00000444457 HERC2O95714 4834 aa9.34□□□□□ -0.91
PMPCB-204ENST00000444457 LPAP08519 4548 aa9.31□□□□□ -0.92
PMPCB-204ENST00000444457 LRP2P98164 4655 aa9.31□□□□□ -0.92
PMPCB-204ENST00000444457 M0QZ58 72 aa9.18□□□□□ -0.94
PMPCB-204ENST00000444457 PCLOQ9Y6V0 5065 aa9.16□□□□□ -0.94
PMPCB-204ENST00000444457 J3QL48 77 aa9.12□□□□□ -0.95
PMPCB-204ENST00000444457 A0A0A0MQY5 61 aa9□□□□□ -0.97
PMPCB-204ENST00000444457 PLAC4Q8WY50 150 aa8.99□□□□□ -0.97
PMPCB-204ENST00000444457 SEC61BP60468 96 aaKnown RBP8.98□□□□□ -0.97
PMPCB-204ENST00000444457 HERC1Q15751 4861 aa8.96□□□□□ -0.97
PMPCB-204ENST00000444457 MUC17Q685J3 4493 aa8.96□□□□□ -0.98
PMPCB-204ENST00000444457 LUZP6Q538Z0 58 aa8.91□□□□□ -0.98
PMPCB-204ENST00000444457 KRTAP4-1Q9BYQ7 146 aa8.86□□□□□ -0.99
PMPCB-204ENST00000444457 R4GN34 69 aa8.8□□□□□ -1
PMPCB-204ENST00000444457 KRTAP19-2Q3LHN2 52 aa8.71□□□□□ -1.01
PMPCB-204ENST00000444457 HMCN2Q8NDA2 5059 aa8.67□□□□□ -1.02
PMPCB-204ENST00000444457 LORP23490 312 aaPredicted RBP8.67□□□□□ -1.02
PMPCB-204ENST00000444457 PP632Q6XCG6 107 aa8.67□□□□□ -1.02
PMPCB-204ENST00000444457 MUC2Q02817 5179 aa8.57□□□□□ -1.04
PMPCB-204ENST00000444457 FLGP20930 4061 aaPredicted RBP8.5□□□□□ -1.05
PMPCB-204ENST00000444457 UBR4Q5T4S7 5183 aa8.44□□□□□ -1.06
PMPCB-204ENST00000444457 CAMK2N1Q7Z7J9 78 aa8.41□□□□□ -1.06
PMPCB-204ENST00000444457 RNF213Q63HN8 5207 aa8.37□□□□□ -1.07
PMPCB-204ENST00000444457 SPRR5A0A1B0GTR4 108 aa8.35□□□□□ -1.07
PMPCB-204ENST00000444457 KRTAP23-1A1A580 65 aa8.27□□□□□ -1.09
PMPCB-204ENST00000444457 LCE2CQ5TA81 110 aa8.22□□□□□ -1.09
PMPCB-204ENST00000444457 TNP1P09430 55 aa8.19□□□□□ -1.1
PMPCB-204ENST00000444457 FAT4Q6V0I7 4981 aa8.18□□□□□ -1.1
PMPCB-204ENST00000444457 SPRR2GQ9BYE4 73 aa8.02□□□□□ -1.13
PMPCB-204ENST00000444457 MT1HP80294 61 aa8□□□□□ -1.13
PMPCB-204ENST00000444457 M0R2T5 61 aa8□□□□□ -1.13
PMPCB-204ENST00000444457 KRTAP19-1Q8IUB9 90 aa7.97□□□□□ -1.13
PMPCB-204ENST00000444457 PRO2289Q9P1D8 64 aa7.95□□□□□ -1.14
PMPCB-204ENST00000444457 MT2AP02795 61 aa7.85□□□□□ -1.15
PMPCB-204ENST00000444457 MT1FP04733 61 aa7.85□□□□□ -1.15
PMPCB-204ENST00000444457 KRTAP10-10P60014 251 aa7.83□□□□□ -1.16
PMPCB-204ENST00000444457 KRTAP9-8Q9BYQ0 159 aa7.81□□□□□ -1.16
PMPCB-204ENST00000444457 INE1O15225 51 aa7.78□□□□□ -1.16
PMPCB-204ENST00000444457 LCE3AQ5TA76 89 aa7.7□□□□□ -1.18
PMPCB-204ENST00000444457 KRTAP19-8Q3LI54 63 aa7.68□□□□□ -1.18
PMPCB-204ENST00000444457 LCE2AQ5TA79 106 aaPredicted RBP7.59□□□□□ -1.19
PMPCB-204ENST00000444457 MT1BP07438 61 aa7.58□□□□□ -1.2
PMPCB-204ENST00000444457 KRTAP8-1Q8IUC2 63 aa7.54□□□□□ -1.2
PMPCB-204ENST00000444457 KRTAP10-5P60370 271 aa7.51□□□□□ -1.21
PMPCB-204ENST00000444457 MT1XP80297 61 aa7.5□□□□□ -1.21
PMPCB-204ENST00000444457 KRTAP9-3Q9BYQ3 159 aa7.49□□□□□ -1.21
PMPCB-204ENST00000444457 KRTAP10-12P60413 245 aa7.32□□□□□ -1.24
PMPCB-204ENST00000444457 KRTAP12-3P60328 96 aa7.31□□□□□ -1.24
PMPCB-204ENST00000444457 KRTAP10-7P60409 375 aaPredicted RBP7.27□□□□□ -1.24
PMPCB-204ENST00000444457 LCE2BO14633 110 aa7.2□□□□□ -1.26
PMPCB-204ENST00000444457 USH2AO75445 5202 aa7.16□□□□□ -1.26
PMPCB-204ENST00000444457 FSIP2Q5CZC0 6907 aa7.09□□□□□ -1.27
PMPCB-204ENST00000444457 KRTAP19-5Q3LI72 72 aa6.95□□□□□ -1.3
PMPCB-204ENST00000444457 LCE3CQ5T5A8 94 aa6.93□□□□□ -1.3
PMPCB-204ENST00000444457 KMT2DO14686 5537 aa6.86□□□□□ -1.31
PMPCB-204ENST00000444457 SSPOA2VEC9 5147 aa6.84□□□□□ -1.31
PMPCB-204ENST00000444457 KRTAP4-8A0A0G2JLE6 195 aa6.83□□□□□ -1.32
PMPCB-204ENST00000444457 KRTAP4-8Q9BYQ9 185 aa6.83□□□□□ -1.32
PMPCB-204ENST00000444457 LCE2DQ5TA82 110 aaPredicted RBP6.82□□□□□ -1.32
PMPCB-204ENST00000444457 KRTAP9-2Q9BYQ4 174 aa6.75□□□□□ -1.33
PMPCB-204ENST00000444457 KRTAP9-6A8MVA2 160 aa6.74□□□□□ -1.33
PMPCB-204ENST00000444457 KRTAP2-3P0C7H8 128 aa6.73□□□□□ -1.33
PMPCB-204ENST00000444457 KRTAP2-4Q9BYR9 128 aa6.73□□□□□ -1.33
PMPCB-204ENST00000444457 KRTAP2-1Q9BYU5 128 aa6.73□□□□□ -1.33
PMPCB-204ENST00000444457 KRTAP19-7Q3SYF9 63 aa6.68□□□□□ -1.34
PMPCB-204ENST00000444457 KRTAP19-6Q3LI70 58 aa6.61□□□□□ -1.35
PMPCB-204ENST00000444457 FCGBPQ9Y6R7 5405 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms