RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 Q5VSD8 79 aa8.74□□□□□ -1.01
PIKFYVE-206ENST00000443896 KRTAP10-8P60410 259 aa8.73□□□□□ -1.01
PIKFYVE-206ENST00000443896 RYR3Q15413 4870 aa8.73□□□□□ -1.01
PIKFYVE-206ENST00000443896 FAT3Q8TDW7 4589 aa8.72□□□□□ -1.01
PIKFYVE-206ENST00000443896 LRP1Q07954 4544 aaKnown RBP8.71□□□□□ -1.01
PIKFYVE-206ENST00000443896 RYR1P21817 5038 aa8.68□□□□□ -1.02
PIKFYVE-206ENST00000443896 SPINT4Q6UDR6 99 aa8.67□□□□□ -1.02
PIKFYVE-206ENST00000443896 A0A1B0GU33 70 aa8.62□□□□□ -1.03
PIKFYVE-206ENST00000443896 KRTAP17-1Q9BYP8 105 aa8.61□□□□□ -1.03
PIKFYVE-206ENST00000443896 NDUFAF8A1L188 74 aa8.6□□□□□ -1.03
PIKFYVE-206ENST00000443896 KRTAP3-1Q9BYR8 98 aa8.6□□□□□ -1.03
PIKFYVE-206ENST00000443896 C10orf95Q9H7T3 257 aa8.53□□□□□ -1.04
PIKFYVE-206ENST00000443896 KIAA1109Q2LD37 5005 aa8.52□□□□□ -1.05
PIKFYVE-206ENST00000443896 RPL37P61927 97 aaKnown RBP8.5□□□□□ -1.05
PIKFYVE-206ENST00000443896 MT1HL1P0DM35 61 aa8.5□□□□□ -1.05
PIKFYVE-206ENST00000443896 H1FX-AS1Q4G0G2 97 aa8.49□□□□□ -1.05
PIKFYVE-206ENST00000443896 COX6B2Q6YFQ2 88 aa8.49□□□□□ -1.05
PIKFYVE-206ENST00000443896 A0A0D9SG42 100 aa8.48□□□□□ -1.05
PIKFYVE-206ENST00000443896 XP32Q5T750 250 aa8.48□□□□□ -1.05
PIKFYVE-206ENST00000443896 K7ERS5 55 aa8.47□□□□□ -1.05
PIKFYVE-206ENST00000443896 MYCBP2O75592 4640 aa8.45□□□□□ -1.06
PIKFYVE-206ENST00000443896 TPRXLQ17RH7 258 aa8.42□□□□□ -1.06
PIKFYVE-206ENST00000443896 EPPK1P58107 5090 aaKnown RBP8.4□□□□□ -1.07
PIKFYVE-206ENST00000443896 KRTAP3-3Q9BYR6 98 aa8.26□□□□□ -1.09
PIKFYVE-206ENST00000443896 KRTAP15-1Q3LI76 137 aa8.23□□□□□ -1.09
PIKFYVE-206ENST00000443896 KRTAP13-4Q3LI77 160 aa8.21□□□□□ -1.1
PIKFYVE-206ENST00000443896 KRTAP4-5Q9BYR2 181 aa8.21□□□□□ -1.1
PIKFYVE-206ENST00000443896 S4R3F8 94 aa8.2□□□□□ -1.1
PIKFYVE-206ENST00000443896 LRP2P98164 4655 aa8.17□□□□□ -1.1
PIKFYVE-206ENST00000443896 LPAP08519 4548 aa8.17□□□□□ -1.1
PIKFYVE-206ENST00000443896 ABCA13Q86UQ4 5058 aa8.14□□□□□ -1.11
PIKFYVE-206ENST00000443896 KRTAP10-6P60371 365 aaPredicted RBP8.12□□□□□ -1.11
PIKFYVE-206ENST00000443896 KRTAP3-2Q9BYR7 98 aa8.09□□□□□ -1.11
PIKFYVE-206ENST00000443896 J3QL48 77 aa8.08□□□□□ -1.12
PIKFYVE-206ENST00000443896 KRTAP12-2P59991 146 aa8□□□□□ -1.13
PIKFYVE-206ENST00000443896 LUZP6Q538Z0 58 aa7.95□□□□□ -1.14
PIKFYVE-206ENST00000443896 SEC61BP60468 96 aaKnown RBP7.95□□□□□ -1.14
PIKFYVE-206ENST00000443896 HERC2O95714 4834 aa7.93□□□□□ -1.14
PIKFYVE-206ENST00000443896 MUC17Q685J3 4493 aa7.9□□□□□ -1.15
PIKFYVE-206ENST00000443896 BIRC6Q9NR09 4857 aa7.84□□□□□ -1.15
PIKFYVE-206ENST00000443896 KRTAP4-1Q9BYQ7 146 aa7.83□□□□□ -1.16
PIKFYVE-206ENST00000443896 KRTAP12-1P59990 96 aa7.77□□□□□ -1.17
PIKFYVE-206ENST00000443896 M0QZ58 72 aa7.75□□□□□ -1.17
PIKFYVE-206ENST00000443896 KRTAP19-2Q3LHN2 52 aa7.7□□□□□ -1.18
PIKFYVE-206ENST00000443896 PLAC4Q8WY50 150 aa7.66□□□□□ -1.18
PIKFYVE-206ENST00000443896 R4GN34 69 aa7.58□□□□□ -1.2
PIKFYVE-206ENST00000443896 PCLOQ9Y6V0 5065 aa7.54□□□□□ -1.2
PIKFYVE-206ENST00000443896 LORP23490 312 aaPredicted RBP7.53□□□□□ -1.2
PIKFYVE-206ENST00000443896 HMCN2Q8NDA2 5059 aa7.52□□□□□ -1.21
PIKFYVE-206ENST00000443896 HERC1Q15751 4861 aa7.52□□□□□ -1.21
PIKFYVE-206ENST00000443896 MUC2Q02817 5179 aa7.52□□□□□ -1.21
PIKFYVE-206ENST00000443896 FLGP20930 4061 aaPredicted RBP7.48□□□□□ -1.21
PIKFYVE-206ENST00000443896 LCE2CQ5TA81 110 aa7.31□□□□□ -1.24
PIKFYVE-206ENST00000443896 FAT4Q6V0I7 4981 aa7.18□□□□□ -1.26
PIKFYVE-206ENST00000443896 CAMK2N1Q7Z7J9 78 aa7.16□□□□□ -1.26
PIKFYVE-206ENST00000443896 RNF213Q63HN8 5207 aa7.15□□□□□ -1.26
PIKFYVE-206ENST00000443896 UBR4Q5T4S7 5183 aa7.11□□□□□ -1.27
PIKFYVE-206ENST00000443896 MT1HP80294 61 aa7.11□□□□□ -1.27
PIKFYVE-206ENST00000443896 M0R2T5 61 aa7.07□□□□□ -1.28
PIKFYVE-206ENST00000443896 SPRR2GQ9BYE4 73 aa7.05□□□□□ -1.28
PIKFYVE-206ENST00000443896 KRTAP19-1Q8IUB9 90 aa7.01□□□□□ -1.29
PIKFYVE-206ENST00000443896 PP632Q6XCG6 107 aa6.95□□□□□ -1.3
PIKFYVE-206ENST00000443896 MT2AP02795 61 aa6.95□□□□□ -1.3
PIKFYVE-206ENST00000443896 MT1FP04733 61 aa6.94□□□□□ -1.3
PIKFYVE-206ENST00000443896 KRTAP9-8Q9BYQ0 159 aa6.93□□□□□ -1.3
PIKFYVE-206ENST00000443896 KRTAP10-10P60014 251 aa6.9□□□□□ -1.3
PIKFYVE-206ENST00000443896 TNP1P09430 55 aa6.89□□□□□ -1.31
PIKFYVE-206ENST00000443896 KRTAP23-1A1A580 65 aa6.82□□□□□ -1.32
PIKFYVE-206ENST00000443896 KRTAP19-8Q3LI54 63 aa6.78□□□□□ -1.32
PIKFYVE-206ENST00000443896 PRO2289Q9P1D8 64 aa6.73□□□□□ -1.33
PIKFYVE-206ENST00000443896 MT1BP07438 61 aa6.68□□□□□ -1.34
PIKFYVE-206ENST00000443896 SPRR5A0A1B0GTR4 108 aa6.68□□□□□ -1.34
PIKFYVE-206ENST00000443896 KRTAP9-3Q9BYQ3 159 aa6.66□□□□□ -1.34
PIKFYVE-206ENST00000443896 KRTAP10-5P60370 271 aa6.59□□□□□ -1.35
PIKFYVE-206ENST00000443896 MT1XP80297 61 aa6.58□□□□□ -1.36
PIKFYVE-206ENST00000443896 LCE3AQ5TA76 89 aa6.54□□□□□ -1.36
PIKFYVE-206ENST00000443896 LCE2AQ5TA79 106 aaPredicted RBP6.46□□□□□ -1.37
PIKFYVE-206ENST00000443896 KRTAP8-1Q8IUC2 63 aa6.42□□□□□ -1.38
PIKFYVE-206ENST00000443896 LCE2BO14633 110 aa6.4□□□□□ -1.38
PIKFYVE-206ENST00000443896 INE1O15225 51 aa6.4□□□□□ -1.38
PIKFYVE-206ENST00000443896 KRTAP10-12P60413 245 aa6.38□□□□□ -1.39
PIKFYVE-206ENST00000443896 KRTAP10-7P60409 375 aaPredicted RBP6.36□□□□□ -1.39
PIKFYVE-206ENST00000443896 KRTAP12-3P60328 96 aa6.25□□□□□ -1.41
PIKFYVE-206ENST00000443896 USH2AO75445 5202 aa6.19□□□□□ -1.42
PIKFYVE-206ENST00000443896 KRTAP19-5Q3LI72 72 aa6.06□□□□□ -1.44
PIKFYVE-206ENST00000443896 KRTAP4-8A0A0G2JLE6 195 aa5.99□□□□□ -1.45
PIKFYVE-206ENST00000443896 KRTAP4-8Q9BYQ9 185 aa5.99□□□□□ -1.45
PIKFYVE-206ENST00000443896 KMT2DO14686 5537 aa5.99□□□□□ -1.45
PIKFYVE-206ENST00000443896 SSPOA2VEC9 5147 aa5.93□□□□□ -1.46
PIKFYVE-206ENST00000443896 LCE3CQ5T5A8 94 aa5.88□□□□□ -1.47
PIKFYVE-206ENST00000443896 KRTAP9-2Q9BYQ4 174 aa5.87□□□□□ -1.47
PIKFYVE-206ENST00000443896 KRTAP19-7Q3SYF9 63 aa5.87□□□□□ -1.47
PIKFYVE-206ENST00000443896 KRTAP19-6Q3LI70 58 aa5.85□□□□□ -1.47
PIKFYVE-206ENST00000443896 KRTAP9-6A0A140TA67 174 aa5.77□□□□□ -1.49
PIKFYVE-206ENST00000443896 LCE2DQ5TA82 110 aaPredicted RBP5.74□□□□□ -1.49
PIKFYVE-206ENST00000443896 MT1EP04732 61 aa5.72□□□□□ -1.49
PIKFYVE-206ENST00000443896 KRTAP19-4Q3LI73 84 aa5.71□□□□□ -1.5
PIKFYVE-206ENST00000443896 MT1LQ93083 61 aa5.68□□□□□ -1.5
PIKFYVE-206ENST00000443896 KRTAP9-6A8MVA2 160 aa5.65□□□□□ -1.51
PIKFYVE-206ENST00000443896 FSIP2Q5CZC0 6907 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms