RNA–Protein interactions for RNA: ENST00000443870.3

AC016582.3-202, humanhuman

TSL 1 (best) BASIC

Gene AC016582.3, Length 6,580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016582.3-202ENST00000443870 KRTAP12-4P60329 112 aa4.67□□□□□ -1.66
AC016582.3-202ENST00000443870 FBN2P35556 2912 aa4.67□□□□□ -1.66
AC016582.3-202ENST00000443870 AKAP9Q99996 3911 aa4.62□□□□□ -1.67
AC016582.3-202ENST00000443870 MEGF8Q7Z7M0 2845 aa4.61□□□□□ -1.67
AC016582.3-202ENST00000443870 MT1GP13640 62 aa4.58□□□□□ -1.68
AC016582.3-202ENST00000443870 MXRA5Q9NR99 2828 aa4.57□□□□□ -1.68
AC016582.3-202ENST00000443870 MT1HP80294 61 aa4.55□□□□□ -1.68
AC016582.3-202ENST00000443870 SPRR2DP22532 72 aa4.5□□□□□ -1.69
AC016582.3-202ENST00000443870 FBN3Q75N90 2809 aa4.46□□□□□ -1.7
AC016582.3-202ENST00000443870 MT2AP02795 61 aa4.46□□□□□ -1.7
AC016582.3-202ENST00000443870 KRTAP4-1Q9BYQ7 146 aa4.45□□□□□ -1.7
AC016582.3-202ENST00000443870 LCE3EQ5T5B0 92 aa4.43□□□□□ -1.7
AC016582.3-202ENST00000443870 LCE3DQ9BYE3 92 aa4.43□□□□□ -1.7
AC016582.3-202ENST00000443870 COL7A1Q02388 2944 aa4.41□□□□□ -1.7
AC016582.3-202ENST00000443870 ZNF469Q96JG9 3925 aaPredicted RBP4.41□□□□□ -1.7
AC016582.3-202ENST00000443870 CSMD3Q7Z407 3707 aa4.41□□□□□ -1.7
AC016582.3-202ENST00000443870 SPRR5A0A1B0GTR4 108 aa4.39□□□□□ -1.71
AC016582.3-202ENST00000443870 HUWE1Q7Z6Z7 4374 aaKnown RBP4.39□□□□□ -1.71
AC016582.3-202ENST00000443870 LCE2BO14633 110 aa4.39□□□□□ -1.71
AC016582.3-202ENST00000443870 MT1FP04733 61 aa4.38□□□□□ -1.71
AC016582.3-202ENST00000443870 ALMS1Q8TCU4 4167 aa4.38□□□□□ -1.71
AC016582.3-202ENST00000443870 SPRR2GQ9BYE4 73 aa4.34□□□□□ -1.71
AC016582.3-202ENST00000443870 OTOGQ6ZRI0 2925 aa4.33□□□□□ -1.72
AC016582.3-202ENST00000443870 ANK3Q12955 4377 aaKnown RBP4.27□□□□□ -1.73
AC016582.3-202ENST00000443870 PRM1P04553 51 aa4.26□□□□□ -1.73
AC016582.3-202ENST00000443870 FBN1P35555 2871 aaKnown RBP4.24□□□□□ -1.73
AC016582.3-202ENST00000443870 DNAH2Q9P225 4427 aa4.24□□□□□ -1.73
AC016582.3-202ENST00000443870 TRRAPQ9Y4A5 3859 aa4.24□□□□□ -1.73
AC016582.3-202ENST00000443870 LCE1BQ5T7P3 118 aa4.22□□□□□ -1.73
AC016582.3-202ENST00000443870 LCE2CQ5TA81 110 aa4.22□□□□□ -1.73
AC016582.3-202ENST00000443870 MT4P47944 62 aa4.17□□□□□ -1.74
AC016582.3-202ENST00000443870 LCE2DQ5TA82 110 aaPredicted RBP4.17□□□□□ -1.74
AC016582.3-202ENST00000443870 DNAH8Q96JB1 4490 aa4.17□□□□□ -1.74
AC016582.3-202ENST00000443870 KRTAP4-8A0A0G2JLE6 195 aa4.15□□□□□ -1.75
AC016582.3-202ENST00000443870 KRTAP4-8Q9BYQ9 185 aa4.15□□□□□ -1.75
AC016582.3-202ENST00000443870 DNAH1Q9P2D7 4330 aa4.12□□□□□ -1.75
AC016582.3-202ENST00000443870 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
AC016582.3-202ENST00000443870 KRTAP4-7Q9BYR0 210 aa4.06□□□□□ -1.76
AC016582.3-202ENST00000443870 KRTAP19-4Q3LI73 84 aa4.01□□□□□ -1.77
AC016582.3-202ENST00000443870 ANK2Q01484 3957 aa4.01□□□□□ -1.77
AC016582.3-202ENST00000443870 LYSTQ99698 3801 aa4.01□□□□□ -1.77
AC016582.3-202ENST00000443870 DNAH10Q8IVF4 4471 aa4□□□□□ -1.77
AC016582.3-202ENST00000443870 MT1XP80297 61 aa3.99□□□□□ -1.77
AC016582.3-202ENST00000443870 DNAH17Q9UFH2 4485 aa3.96□□□□□ -1.78
AC016582.3-202ENST00000443870 LCE5AQ5TCM9 118 aa3.95□□□□□ -1.78
AC016582.3-202ENST00000443870 FAT1Q14517 4588 aa3.92□□□□□ -1.78
AC016582.3-202ENST00000443870 LOC100996750A0A140TA64 210 aa3.92□□□□□ -1.78
AC016582.3-202ENST00000443870 FRAS1Q86XX4 4008 aa3.88□□□□□ -1.79
AC016582.3-202ENST00000443870 DNAH11Q96DT5 4516 aa3.88□□□□□ -1.79
AC016582.3-202ENST00000443870 KRTAP19-1Q8IUB9 90 aa3.88□□□□□ -1.79
AC016582.3-202ENST00000443870 MT3P25713 68 aa3.85□□□□□ -1.79
AC016582.3-202ENST00000443870 LCE4AQ5TA78 99 aa3.85□□□□□ -1.79
AC016582.3-202ENST00000443870 DNAH9Q9NYC9 4486 aa3.84□□□□□ -1.79
AC016582.3-202ENST00000443870 CMYA5Q8N3K9 4069 aa3.81□□□□□ -1.8
AC016582.3-202ENST00000443870 LCE1CQ5T751 118 aa3.81□□□□□ -1.8
AC016582.3-202ENST00000443870 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
AC016582.3-202ENST00000443870 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
AC016582.3-202ENST00000443870 LCE1AQ5T7P2 110 aa3.81□□□□□ -1.8
AC016582.3-202ENST00000443870 KRTAP19-3Q7Z4W3 81 aa3.81□□□□□ -1.8
AC016582.3-202ENST00000443870 DNAH5Q8TE73 4624 aa3.81□□□□□ -1.8
AC016582.3-202ENST00000443870 KRTAP19-8Q3LI54 63 aa3.8□□□□□ -1.8
AC016582.3-202ENST00000443870 DNAH7Q8WXX0 4024 aa3.8□□□□□ -1.8
AC016582.3-202ENST00000443870 KRTAP4-9Q9BYQ8 210 aa3.8□□□□□ -1.8
AC016582.3-202ENST00000443870 DNAH6Q9C0G6 4158 aa3.78□□□□□ -1.8
AC016582.3-202ENST00000443870 MT1BP07438 61 aa3.78□□□□□ -1.81
AC016582.3-202ENST00000443870 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
AC016582.3-202ENST00000443870 DNAH3Q8TD57 4116 aa3.75□□□□□ -1.81
AC016582.3-202ENST00000443870 FAT2Q9NYQ8 4349 aa3.73□□□□□ -1.81
AC016582.3-202ENST00000443870 VPS13BQ7Z7G8 4022 aa3.73□□□□□ -1.81
AC016582.3-202ENST00000443870 MT1LQ93083 61 aa3.72□□□□□ -1.81
AC016582.3-202ENST00000443870 SACSQ9NZJ4 4579 aa3.69□□□□□ -1.82
AC016582.3-202ENST00000443870 PLECQ15149 4684 aaKnown RBP3.67□□□□□ -1.82
AC016582.3-202ENST00000443870 KMT2AQ03164 3969 aa3.65□□□□□ -1.83
AC016582.3-202ENST00000443870 APOBP04114 4563 aaKnown RBP3.63□□□□□ -1.83
AC016582.3-202ENST00000443870 MT1EP04732 61 aa3.62□□□□□ -1.83
AC016582.3-202ENST00000443870 LRP1Q07954 4544 aaKnown RBP3.61□□□□□ -1.83
AC016582.3-202ENST00000443870 HECTD4Q9Y4D8 3996 aa3.61□□□□□ -1.83
AC016582.3-202ENST00000443870 KRTAP17-1Q9BYP8 105 aa3.6□□□□□ -1.83
AC016582.3-202ENST00000443870 MT1MQ8N339 61 aa3.6□□□□□ -1.83
AC016582.3-202ENST00000443870 KRTAP9-8Q9BYQ0 159 aa3.59□□□□□ -1.83
AC016582.3-202ENST00000443870 VPS13DQ5THJ4 4388 aa3.56□□□□□ -1.84
AC016582.3-202ENST00000443870 STARD9Q9P2P6 4700 aa3.56□□□□□ -1.84
AC016582.3-202ENST00000443870 FAT3Q8TDW7 4589 aa3.56□□□□□ -1.84
AC016582.3-202ENST00000443870 KRTAP9-3Q9BYQ3 159 aa3.54□□□□□ -1.84
AC016582.3-202ENST00000443870 LRP1BQ9NZR2 4599 aa3.54□□□□□ -1.84
AC016582.3-202ENST00000443870 PRKDCP78527 4128 aaKnown RBP3.53□□□□□ -1.84
AC016582.3-202ENST00000443870 KRTAP6-2Q3LI66 62 aa3.52□□□□□ -1.85
AC016582.3-202ENST00000443870 DYNC2H1Q8NCM8 4307 aaKnown RBP3.5□□□□□ -1.85
AC016582.3-202ENST00000443870 KRTAP19-6Q3LI70 58 aa3.49□□□□□ -1.85
AC016582.3-202ENST00000443870 MYCBP2O75592 4640 aa3.45□□□□□ -1.86
AC016582.3-202ENST00000443870 KRTAP9-2Q9BYQ4 174 aa3.44□□□□□ -1.86
AC016582.3-202ENST00000443870 DYNC1H1Q14204 4646 aaKnown RBP3.44□□□□□ -1.86
AC016582.3-202ENST00000443870 KRTAP2-3P0C7H8 128 aa3.41□□□□□ -1.86
AC016582.3-202ENST00000443870 KRTAP2-4Q9BYR9 128 aa3.41□□□□□ -1.86
AC016582.3-202ENST00000443870 KRTAP2-1Q9BYU5 128 aa3.41□□□□□ -1.86
AC016582.3-202ENST00000443870 PKD1P98161 4303 aa3.41□□□□□ -1.86
AC016582.3-202ENST00000443870 KRTAP20-1Q3LI63 56 aa3.4□□□□□ -1.87
AC016582.3-202ENST00000443870 KRTAP9-7A8MTY7 169 aa3.38□□□□□ -1.87
AC016582.3-202ENST00000443870 SYNE2Q8WXH0 6885 aaKnown RBP3.36□□□□□ -1.87
AC016582.3-202ENST00000443870 KRTAP9-6A0A140TA67 174 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms