RNA–Protein interactions for RNA: ENST00000442241.8

NLE1-202, Transcript of notchless homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLE1, Length 2,588 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-202ENST00000442241 KIAA1109Q2LD37 5005 aa8.56□□□□□ -1.04
NLE1-202ENST00000442241 H0YAA0 97 aa8.56□□□□□ -1.04
NLE1-202ENST00000442241 RYR1P21817 5038 aa8.53□□□□□ -1.04
NLE1-202ENST00000442241 KRTAP25-1Q3LHN0 102 aa8.47□□□□□ -1.05
NLE1-202ENST00000442241 KRTAP10-8P60410 259 aa8.47□□□□□ -1.05
NLE1-202ENST00000442241 EPPK1P58107 5090 aaKnown RBP8.43□□□□□ -1.06
NLE1-202ENST00000442241 A0A1B0GU33 70 aa8.42□□□□□ -1.06
NLE1-202ENST00000442241 LPAP08519 4548 aa8.4□□□□□ -1.06
NLE1-202ENST00000442241 H1FX-AS1Q4G0G2 97 aa8.38□□□□□ -1.07
NLE1-202ENST00000442241 ROMO1P60602 79 aa8.36□□□□□ -1.07
NLE1-202ENST00000442241 COX6B2Q6YFQ2 88 aa8.36□□□□□ -1.07
NLE1-202ENST00000442241 XP32Q5T750 250 aa8.35□□□□□ -1.07
NLE1-202ENST00000442241 RPL37P61927 97 aaKnown RBP8.31□□□□□ -1.08
NLE1-202ENST00000442241 LRP2P98164 4655 aa8.3□□□□□ -1.08
NLE1-202ENST00000442241 MT1HL1P0DM35 61 aa8.29□□□□□ -1.08
NLE1-202ENST00000442241 ABCA13Q86UQ4 5058 aa8.28□□□□□ -1.08
NLE1-202ENST00000442241 KRTAP3-3Q9BYR6 98 aa8.21□□□□□ -1.09
NLE1-202ENST00000442241 K7ERS5 55 aa8.21□□□□□ -1.1
NLE1-202ENST00000442241 CRIPTQ9P021 101 aa8.19□□□□□ -1.1
NLE1-202ENST00000442241 KRTAP4-5Q9BYR2 181 aa8.18□□□□□ -1.1
NLE1-202ENST00000442241 P0C880 135 aa8.13□□□□□ -1.11
NLE1-202ENST00000442241 S4R3F8 94 aa8.13□□□□□ -1.11
NLE1-202ENST00000442241 KRTAP10-6P60371 365 aaPredicted RBP8.1□□□□□ -1.11
NLE1-202ENST00000442241 A0A0D9SG42 100 aa8.09□□□□□ -1.11
NLE1-202ENST00000442241 KRTAP13-4Q3LI77 160 aa8.09□□□□□ -1.12
NLE1-202ENST00000442241 KRTAP3-2Q9BYR7 98 aa8.05□□□□□ -1.12
NLE1-202ENST00000442241 TPRXLQ17RH7 258 aa8.01□□□□□ -1.13
NLE1-202ENST00000442241 SPINT4Q6UDR6 99 aa7.9□□□□□ -1.15
NLE1-202ENST00000442241 HERC2O95714 4834 aa7.88□□□□□ -1.15
NLE1-202ENST00000442241 C10orf95Q9H7T3 257 aa7.87□□□□□ -1.15
NLE1-202ENST00000442241 KRTAP15-1Q3LI76 137 aa7.84□□□□□ -1.15
NLE1-202ENST00000442241 MUC17Q685J3 4493 aa7.84□□□□□ -1.15
NLE1-202ENST00000442241 MUC2Q02817 5179 aa7.82□□□□□ -1.16
NLE1-202ENST00000442241 J3QL48 77 aa7.8□□□□□ -1.16
NLE1-202ENST00000442241 KRTAP12-2P59991 146 aa7.8□□□□□ -1.16
NLE1-202ENST00000442241 KRTAP4-1Q9BYQ7 146 aa7.79□□□□□ -1.16
NLE1-202ENST00000442241 NDUFAF8A1L188 74 aa7.73□□□□□ -1.17
NLE1-202ENST00000442241 KRTAP12-1P59990 96 aa7.71□□□□□ -1.17
NLE1-202ENST00000442241 SEC61BP60468 96 aaKnown RBP7.68□□□□□ -1.18
NLE1-202ENST00000442241 HERC1Q15751 4861 aa7.64□□□□□ -1.19
NLE1-202ENST00000442241 LORP23490 312 aaPredicted RBP7.64□□□□□ -1.19
NLE1-202ENST00000442241 M0QZ58 72 aa7.63□□□□□ -1.19
NLE1-202ENST00000442241 BIRC6Q9NR09 4857 aa7.59□□□□□ -1.2
NLE1-202ENST00000442241 PCLOQ9Y6V0 5065 aa7.58□□□□□ -1.2
NLE1-202ENST00000442241 R4GN34 69 aa7.56□□□□□ -1.2
NLE1-202ENST00000442241 KRTAP19-2Q3LHN2 52 aa7.5□□□□□ -1.21
NLE1-202ENST00000442241 FAT4Q6V0I7 4981 aa7.42□□□□□ -1.22
NLE1-202ENST00000442241 HMCN2Q8NDA2 5059 aa7.41□□□□□ -1.22
NLE1-202ENST00000442241 FLGP20930 4061 aaPredicted RBP7.37□□□□□ -1.23
NLE1-202ENST00000442241 RNF213Q63HN8 5207 aa7.33□□□□□ -1.24
NLE1-202ENST00000442241 PLAC4Q8WY50 150 aa7.28□□□□□ -1.24
NLE1-202ENST00000442241 UBR4Q5T4S7 5183 aa7.23□□□□□ -1.25
NLE1-202ENST00000442241 CAMK2N1Q7Z7J9 78 aa7.19□□□□□ -1.26
NLE1-202ENST00000442241 LCE2CQ5TA81 110 aa7.14□□□□□ -1.27
NLE1-202ENST00000442241 PP632Q6XCG6 107 aa7.08□□□□□ -1.28
NLE1-202ENST00000442241 M0R2T5 61 aa7.07□□□□□ -1.28
NLE1-202ENST00000442241 LUZP6Q538Z0 58 aa7.06□□□□□ -1.28
NLE1-202ENST00000442241 A0A0A0MQY5 61 aa7□□□□□ -1.29
NLE1-202ENST00000442241 MT1HP80294 61 aa6.96□□□□□ -1.3
NLE1-202ENST00000442241 KRTAP19-1Q8IUB9 90 aa6.9□□□□□ -1.31
NLE1-202ENST00000442241 MT1FP04733 61 aa6.86□□□□□ -1.31
NLE1-202ENST00000442241 KRTAP10-10P60014 251 aa6.86□□□□□ -1.31
NLE1-202ENST00000442241 MT2AP02795 61 aa6.82□□□□□ -1.32
NLE1-202ENST00000442241 SPRR2GQ9BYE4 73 aa6.82□□□□□ -1.32
NLE1-202ENST00000442241 TNP1P09430 55 aa6.81□□□□□ -1.32
NLE1-202ENST00000442241 SPRR5A0A1B0GTR4 108 aa6.8□□□□□ -1.32
NLE1-202ENST00000442241 KRTAP23-1A1A580 65 aa6.78□□□□□ -1.32
NLE1-202ENST00000442241 KRTAP9-8Q9BYQ0 159 aa6.77□□□□□ -1.33
NLE1-202ENST00000442241 LCE3AQ5TA76 89 aa6.59□□□□□ -1.35
NLE1-202ENST00000442241 MT1BP07438 61 aa6.56□□□□□ -1.36
NLE1-202ENST00000442241 KRTAP19-8Q3LI54 63 aa6.52□□□□□ -1.37
NLE1-202ENST00000442241 USH2AO75445 5202 aa6.51□□□□□ -1.37
NLE1-202ENST00000442241 KRTAP10-5P60370 271 aa6.5□□□□□ -1.37
NLE1-202ENST00000442241 MT1XP80297 61 aa6.49□□□□□ -1.37
NLE1-202ENST00000442241 KRTAP9-3Q9BYQ3 159 aa6.47□□□□□ -1.37
NLE1-202ENST00000442241 KRTAP10-7P60409 375 aaPredicted RBP6.38□□□□□ -1.39
NLE1-202ENST00000442241 KMT2DO14686 5537 aa6.36□□□□□ -1.39
NLE1-202ENST00000442241 PRO2289Q9P1D8 64 aa6.33□□□□□ -1.4
NLE1-202ENST00000442241 LCE2BO14633 110 aa6.31□□□□□ -1.4
NLE1-202ENST00000442241 KRTAP10-12P60413 245 aa6.31□□□□□ -1.4
NLE1-202ENST00000442241 KRTAP8-1Q8IUC2 63 aa6.26□□□□□ -1.41
NLE1-202ENST00000442241 INE1O15225 51 aa6.22□□□□□ -1.41
NLE1-202ENST00000442241 KRTAP12-3P60328 96 aa6.21□□□□□ -1.41
NLE1-202ENST00000442241 LCE2AQ5TA79 106 aaPredicted RBP6.16□□□□□ -1.42
NLE1-202ENST00000442241 KRTAP4-8A0A0G2JLE6 195 aa6.09□□□□□ -1.43
NLE1-202ENST00000442241 KRTAP4-8Q9BYQ9 185 aa6.09□□□□□ -1.43
NLE1-202ENST00000442241 FSIP2Q5CZC0 6907 aa6.07□□□□□ -1.44
NLE1-202ENST00000442241 KRTAP19-5Q3LI72 72 aa6.07□□□□□ -1.44
NLE1-202ENST00000442241 SSPOA2VEC9 5147 aa5.92□□□□□ -1.46
NLE1-202ENST00000442241 LCE3CQ5T5A8 94 aa5.82□□□□□ -1.48
NLE1-202ENST00000442241 KRTAP4-7Q9BYR0 210 aa5.82□□□□□ -1.48
NLE1-202ENST00000442241 KRTAP19-7Q3SYF9 63 aa5.78□□□□□ -1.48
NLE1-202ENST00000442241 KRTAP9-6A8MVA2 160 aa5.72□□□□□ -1.49
NLE1-202ENST00000442241 FCGBPQ9Y6R7 5405 aaPredicted RBP5.64□□□□□ -1.51
NLE1-202ENST00000442241 MUC12Q9UKN1 5478 aa5.61□□□□□ -1.51
NLE1-202ENST00000442241 MT1EP04732 61 aa5.6□□□□□ -1.51
NLE1-202ENST00000442241 MT1LQ93083 61 aa5.59□□□□□ -1.52
NLE1-202ENST00000442241 KRTAP19-6Q3LI70 58 aa5.55□□□□□ -1.52
NLE1-202ENST00000442241 KRTAP2-3P0C7H8 128 aa5.52□□□□□ -1.53
NLE1-202ENST00000442241 KRTAP2-4Q9BYR9 128 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms