RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 KMT2CQ8NEZ4 4911 aaKnown RBP8.61□□□□□ -1.03
SEMA3B-207ENST00000441915 KRTAP10-8P60410 259 aa8.58□□□□□ -1.04
SEMA3B-207ENST00000441915 P0C880 135 aa8.57□□□□□ -1.04
SEMA3B-207ENST00000441915 RPL37P61927 97 aaKnown RBP8.54□□□□□ -1.04
SEMA3B-207ENST00000441915 HSPG2P98160 4391 aa8.53□□□□□ -1.04
SEMA3B-207ENST00000441915 CRIPTQ9P021 101 aa8.52□□□□□ -1.04
SEMA3B-207ENST00000441915 K7ERS5 55 aa8.52□□□□□ -1.05
SEMA3B-207ENST00000441915 Q5VSD8 79 aa8.52□□□□□ -1.05
SEMA3B-207ENST00000441915 DMBT1Q9UGM3 2413 aaPredicted RBP8.5□□□□□ -1.05
SEMA3B-207ENST00000441915 XP32Q5T750 250 aa8.48□□□□□ -1.05
SEMA3B-207ENST00000441915 KRTAP3-3Q9BYR6 98 aa8.47□□□□□ -1.05
SEMA3B-207ENST00000441915 MYCBP2O75592 4640 aa8.47□□□□□ -1.05
SEMA3B-207ENST00000441915 KRTAP10-6P60371 365 aaPredicted RBP8.43□□□□□ -1.06
SEMA3B-207ENST00000441915 S4R3F8 94 aa8.42□□□□□ -1.06
SEMA3B-207ENST00000441915 RYR1P21817 5038 aa8.36□□□□□ -1.07
SEMA3B-207ENST00000441915 KRTAP3-2Q9BYR7 98 aa8.35□□□□□ -1.07
SEMA3B-207ENST00000441915 KRTAP13-4Q3LI77 160 aa8.33□□□□□ -1.08
SEMA3B-207ENST00000441915 SPINT4Q6UDR6 99 aa8.33□□□□□ -1.08
SEMA3B-207ENST00000441915 A0A0D9SG42 100 aa8.31□□□□□ -1.08
SEMA3B-207ENST00000441915 RYR3Q15413 4870 aa8.29□□□□□ -1.08
SEMA3B-207ENST00000441915 MT1HL1P0DM35 61 aa8.27□□□□□ -1.09
SEMA3B-207ENST00000441915 KRTAP17-1Q9BYP8 105 aa8.26□□□□□ -1.09
SEMA3B-207ENST00000441915 TPRXLQ17RH7 258 aa8.24□□□□□ -1.09
SEMA3B-207ENST00000441915 LPAP08519 4548 aa8.23□□□□□ -1.09
SEMA3B-207ENST00000441915 NDUFAF8A1L188 74 aa8.22□□□□□ -1.09
SEMA3B-207ENST00000441915 KIAA1109Q2LD37 5005 aa8.21□□□□□ -1.09
SEMA3B-207ENST00000441915 KRTAP15-1Q3LI76 137 aa8.18□□□□□ -1.1
SEMA3B-207ENST00000441915 LRP2P98164 4655 aa8.17□□□□□ -1.1
SEMA3B-207ENST00000441915 C10orf95Q9H7T3 257 aa8.12□□□□□ -1.11
SEMA3B-207ENST00000441915 KRTAP12-2P59991 146 aa8.09□□□□□ -1.12
SEMA3B-207ENST00000441915 M0QZ58 72 aa8.04□□□□□ -1.12
SEMA3B-207ENST00000441915 KRTAP12-1P59990 96 aa8.03□□□□□ -1.12
SEMA3B-207ENST00000441915 EPPK1P58107 5090 aaKnown RBP7.97□□□□□ -1.13
SEMA3B-207ENST00000441915 ABCA13Q86UQ4 5058 aa7.97□□□□□ -1.13
SEMA3B-207ENST00000441915 A0A0A0MQY5 61 aa7.94□□□□□ -1.14
SEMA3B-207ENST00000441915 SEC61BP60468 96 aaKnown RBP7.86□□□□□ -1.15
SEMA3B-207ENST00000441915 R4GN34 69 aa7.85□□□□□ -1.15
SEMA3B-207ENST00000441915 KRTAP4-5Q9BYR2 181 aa7.84□□□□□ -1.15
SEMA3B-207ENST00000441915 MUC17Q685J3 4493 aa7.81□□□□□ -1.16
SEMA3B-207ENST00000441915 KRTAP4-1Q9BYQ7 146 aa7.7□□□□□ -1.18
SEMA3B-207ENST00000441915 J3QL48 77 aa7.68□□□□□ -1.18
SEMA3B-207ENST00000441915 LORP23490 312 aaPredicted RBP7.67□□□□□ -1.18
SEMA3B-207ENST00000441915 LUZP6Q538Z0 58 aa7.66□□□□□ -1.18
SEMA3B-207ENST00000441915 HERC2O95714 4834 aa7.59□□□□□ -1.19
SEMA3B-207ENST00000441915 KRTAP19-2Q3LHN2 52 aa7.57□□□□□ -1.2
SEMA3B-207ENST00000441915 PLAC4Q8WY50 150 aa7.55□□□□□ -1.2
SEMA3B-207ENST00000441915 MUC2Q02817 5179 aa7.48□□□□□ -1.21
SEMA3B-207ENST00000441915 CAMK2N1Q7Z7J9 78 aa7.45□□□□□ -1.22
SEMA3B-207ENST00000441915 FLGP20930 4061 aaPredicted RBP7.42□□□□□ -1.22
SEMA3B-207ENST00000441915 BIRC6Q9NR09 4857 aa7.4□□□□□ -1.22
SEMA3B-207ENST00000441915 PP632Q6XCG6 107 aa7.36□□□□□ -1.23
SEMA3B-207ENST00000441915 PCLOQ9Y6V0 5065 aa7.23□□□□□ -1.25
SEMA3B-207ENST00000441915 HERC1Q15751 4861 aa7.21□□□□□ -1.25
SEMA3B-207ENST00000441915 TNP1P09430 55 aa7.18□□□□□ -1.26
SEMA3B-207ENST00000441915 HMCN2Q8NDA2 5059 aa7.17□□□□□ -1.26
SEMA3B-207ENST00000441915 FAT4Q6V0I7 4981 aa7.12□□□□□ -1.27
SEMA3B-207ENST00000441915 LCE2CQ5TA81 110 aa7.09□□□□□ -1.27
SEMA3B-207ENST00000441915 KRTAP23-1A1A580 65 aa7.09□□□□□ -1.27
SEMA3B-207ENST00000441915 SPRR2GQ9BYE4 73 aa7.04□□□□□ -1.28
SEMA3B-207ENST00000441915 M0R2T5 61 aa7□□□□□ -1.29
SEMA3B-207ENST00000441915 KRTAP19-1Q8IUB9 90 aa6.98□□□□□ -1.29
SEMA3B-207ENST00000441915 SPRR5A0A1B0GTR4 108 aa6.92□□□□□ -1.3
SEMA3B-207ENST00000441915 MT1HP80294 61 aa6.92□□□□□ -1.3
SEMA3B-207ENST00000441915 RNF213Q63HN8 5207 aa6.85□□□□□ -1.31
SEMA3B-207ENST00000441915 KRTAP10-10P60014 251 aa6.85□□□□□ -1.31
SEMA3B-207ENST00000441915 UBR4Q5T4S7 5183 aa6.83□□□□□ -1.32
SEMA3B-207ENST00000441915 MT1FP04733 61 aa6.82□□□□□ -1.32
SEMA3B-207ENST00000441915 MT2AP02795 61 aa6.82□□□□□ -1.32
SEMA3B-207ENST00000441915 KRTAP9-8Q9BYQ0 159 aa6.77□□□□□ -1.33
SEMA3B-207ENST00000441915 PRO2289Q9P1D8 64 aa6.77□□□□□ -1.33
SEMA3B-207ENST00000441915 LCE3AQ5TA76 89 aa6.75□□□□□ -1.33
SEMA3B-207ENST00000441915 KRTAP19-8Q3LI54 63 aa6.7□□□□□ -1.34
SEMA3B-207ENST00000441915 MT1BP07438 61 aa6.61□□□□□ -1.35
SEMA3B-207ENST00000441915 KRTAP8-1Q8IUC2 63 aa6.6□□□□□ -1.35
SEMA3B-207ENST00000441915 KRTAP10-5P60370 271 aa6.59□□□□□ -1.35
SEMA3B-207ENST00000441915 INE1O15225 51 aa6.58□□□□□ -1.36
SEMA3B-207ENST00000441915 MT1XP80297 61 aa6.58□□□□□ -1.36
SEMA3B-207ENST00000441915 KRTAP10-12P60413 245 aa6.49□□□□□ -1.37
SEMA3B-207ENST00000441915 KRTAP9-3Q9BYQ3 159 aa6.48□□□□□ -1.37
SEMA3B-207ENST00000441915 KRTAP12-3P60328 96 aa6.45□□□□□ -1.38
SEMA3B-207ENST00000441915 KRTAP10-7P60409 375 aaPredicted RBP6.4□□□□□ -1.39
SEMA3B-207ENST00000441915 LCE2BO14633 110 aa6.2□□□□□ -1.42
SEMA3B-207ENST00000441915 USH2AO75445 5202 aa6.14□□□□□ -1.43
SEMA3B-207ENST00000441915 KRTAP19-5Q3LI72 72 aa6.14□□□□□ -1.43
SEMA3B-207ENST00000441915 KMT2DO14686 5537 aa6.07□□□□□ -1.44
SEMA3B-207ENST00000441915 LCE3CQ5T5A8 94 aa6.06□□□□□ -1.44
SEMA3B-207ENST00000441915 LCE2AQ5TA79 106 aaPredicted RBP6.05□□□□□ -1.44
SEMA3B-207ENST00000441915 KRTAP4-8A0A0G2JLE6 195 aa5.99□□□□□ -1.45
SEMA3B-207ENST00000441915 KRTAP4-8Q9BYQ9 185 aa5.99□□□□□ -1.45
SEMA3B-207ENST00000441915 KRTAP19-7Q3SYF9 63 aa5.86□□□□□ -1.47
SEMA3B-207ENST00000441915 KRTAP9-6A8MVA2 160 aa5.82□□□□□ -1.48
SEMA3B-207ENST00000441915 KRTAP19-4Q3LI73 84 aa5.77□□□□□ -1.49
SEMA3B-207ENST00000441915 FSIP2Q5CZC0 6907 aa5.76□□□□□ -1.49
SEMA3B-207ENST00000441915 KRTAP4-7Q9BYR0 210 aa5.74□□□□□ -1.49
SEMA3B-207ENST00000441915 MT1LQ93083 61 aa5.7□□□□□ -1.5
SEMA3B-207ENST00000441915 MT1EP04732 61 aa5.69□□□□□ -1.5
SEMA3B-207ENST00000441915 SSPOA2VEC9 5147 aa5.69□□□□□ -1.5
SEMA3B-207ENST00000441915 KRTAP2-3P0C7H8 128 aa5.65□□□□□ -1.51
SEMA3B-207ENST00000441915 KRTAP2-4Q9BYR9 128 aa5.65□□□□□ -1.51
SEMA3B-207ENST00000441915 KRTAP2-1Q9BYU5 128 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms