RNA–Protein interactions for RNA: ENST00000440919.1

SATB2-204, Transcript of SATB homeobox 2, humanhuman

TSL 1 (best)

Gene SATB2, Length 2,166 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-204ENST00000440919 LRP1Q07954 4544 aaKnown RBP9.25□□□□□ -0.93
SATB2-204ENST00000440919 RYR1P21817 5038 aa9.24□□□□□ -0.93
SATB2-204ENST00000440919 KRTAP10-8P60410 259 aa9.21□□□□□ -0.94
SATB2-204ENST00000440919 KRTAP17-1Q9BYP8 105 aa9.16□□□□□ -0.94
SATB2-204ENST00000440919 KIAA1109Q2LD37 5005 aa9.1□□□□□ -0.95
SATB2-204ENST00000440919 RPL37P61927 97 aaKnown RBP9.09□□□□□ -0.95
SATB2-204ENST00000440919 KRTAP3-3Q9BYR6 98 aa9.07□□□□□ -0.96
SATB2-204ENST00000440919 MYCBP2O75592 4640 aa9.07□□□□□ -0.96
SATB2-204ENST00000440919 EPPK1P58107 5090 aaKnown RBP9.07□□□□□ -0.96
SATB2-204ENST00000440919 KRTAP10-6P60371 365 aaPredicted RBP9.03□□□□□ -0.96
SATB2-204ENST00000440919 XP32Q5T750 250 aa9.03□□□□□ -0.96
SATB2-204ENST00000440919 KRTAP25-1Q3LHN0 102 aa9.02□□□□□ -0.97
SATB2-204ENST00000440919 K7ERS5 55 aa9.01□□□□□ -0.97
SATB2-204ENST00000440919 MT1HL1P0DM35 61 aa9□□□□□ -0.97
SATB2-204ENST00000440919 DMBT1Q9UGM3 2413 aaPredicted RBP9□□□□□ -0.97
SATB2-204ENST00000440919 KRTAP3-2Q9BYR7 98 aa8.96□□□□□ -0.98
SATB2-204ENST00000440919 S4R3F8 94 aa8.95□□□□□ -0.98
SATB2-204ENST00000440919 KRTAP13-4Q3LI77 160 aa8.94□□□□□ -0.98
SATB2-204ENST00000440919 KRTAP4-5Q9BYR2 181 aa8.86□□□□□ -0.99
SATB2-204ENST00000440919 ROMO1P60602 79 aa8.85□□□□□ -0.99
SATB2-204ENST00000440919 A0A0D9SG42 100 aa8.83□□□□□ -1
SATB2-204ENST00000440919 CRIPTQ9P021 101 aa8.83□□□□□ -1
SATB2-204ENST00000440919 LPAP08519 4548 aa8.83□□□□□ -1
SATB2-204ENST00000440919 P0C880 135 aa8.82□□□□□ -1
SATB2-204ENST00000440919 LRP2P98164 4655 aa8.76□□□□□ -1.01
SATB2-204ENST00000440919 TPRXLQ17RH7 258 aa8.72□□□□□ -1.01
SATB2-204ENST00000440919 KRTAP12-2P59991 146 aa8.65□□□□□ -1.02
SATB2-204ENST00000440919 J3QL48 77 aa8.65□□□□□ -1.03
SATB2-204ENST00000440919 ABCA13Q86UQ4 5058 aa8.63□□□□□ -1.03
SATB2-204ENST00000440919 BIRC6Q9NR09 4857 aa8.63□□□□□ -1.03
SATB2-204ENST00000440919 KRTAP12-1P59990 96 aa8.59□□□□□ -1.03
SATB2-204ENST00000440919 HERC2O95714 4834 aa8.59□□□□□ -1.03
SATB2-204ENST00000440919 M0QZ58 72 aa8.54□□□□□ -1.04
SATB2-204ENST00000440919 SPINT4Q6UDR6 99 aa8.54□□□□□ -1.04
SATB2-204ENST00000440919 C10orf95Q9H7T3 257 aa8.54□□□□□ -1.04
SATB2-204ENST00000440919 H3BS24 57 aa8.48□□□□□ -1.05
SATB2-204ENST00000440919 MUC17Q685J3 4493 aa8.42□□□□□ -1.06
SATB2-204ENST00000440919 SEC61BP60468 96 aaKnown RBP8.42□□□□□ -1.06
SATB2-204ENST00000440919 R4GN34 69 aa8.31□□□□□ -1.08
SATB2-204ENST00000440919 KRTAP15-1Q3LI76 137 aa8.25□□□□□ -1.09
SATB2-204ENST00000440919 PCLOQ9Y6V0 5065 aa8.23□□□□□ -1.09
SATB2-204ENST00000440919 KRTAP4-1Q9BYQ7 146 aa8.23□□□□□ -1.09
SATB2-204ENST00000440919 LORP23490 312 aaPredicted RBP8.21□□□□□ -1.09
SATB2-204ENST00000440919 KRTAP19-2Q3LHN2 52 aa8.13□□□□□ -1.11
SATB2-204ENST00000440919 HERC1Q15751 4861 aa8.12□□□□□ -1.11
SATB2-204ENST00000440919 HMCN2Q8NDA2 5059 aa8.06□□□□□ -1.12
SATB2-204ENST00000440919 NDUFAF8A1L188 74 aa8.03□□□□□ -1.12
SATB2-204ENST00000440919 FLGP20930 4061 aaPredicted RBP7.97□□□□□ -1.13
SATB2-204ENST00000440919 MUC2Q02817 5179 aa7.96□□□□□ -1.13
SATB2-204ENST00000440919 CAMK2N1Q7Z7J9 78 aa7.88□□□□□ -1.15
SATB2-204ENST00000440919 PLAC4Q8WY50 150 aa7.84□□□□□ -1.15
SATB2-204ENST00000440919 PP632Q6XCG6 107 aa7.81□□□□□ -1.16
SATB2-204ENST00000440919 LCE2CQ5TA81 110 aa7.73□□□□□ -1.17
SATB2-204ENST00000440919 RNF213Q63HN8 5207 aa7.67□□□□□ -1.18
SATB2-204ENST00000440919 UBR4Q5T4S7 5183 aa7.66□□□□□ -1.18
SATB2-204ENST00000440919 FAT4Q6V0I7 4981 aa7.61□□□□□ -1.19
SATB2-204ENST00000440919 TNP1P09430 55 aa7.61□□□□□ -1.19
SATB2-204ENST00000440919 M0R2T5 61 aa7.57□□□□□ -1.2
SATB2-204ENST00000440919 MT1HP80294 61 aa7.57□□□□□ -1.2
SATB2-204ENST00000440919 KRTAP23-1A1A580 65 aa7.56□□□□□ -1.2
SATB2-204ENST00000440919 SPRR2GQ9BYE4 73 aa7.51□□□□□ -1.21
SATB2-204ENST00000440919 LUZP6Q538Z0 58 aa7.47□□□□□ -1.21
SATB2-204ENST00000440919 KRTAP19-1Q8IUB9 90 aa7.46□□□□□ -1.21
SATB2-204ENST00000440919 SPRR5A0A1B0GTR4 108 aa7.35□□□□□ -1.23
SATB2-204ENST00000440919 MT2AP02795 61 aa7.33□□□□□ -1.24
SATB2-204ENST00000440919 KRTAP9-8Q9BYQ0 159 aa7.32□□□□□ -1.24
SATB2-204ENST00000440919 KRTAP10-10P60014 251 aa7.31□□□□□ -1.24
SATB2-204ENST00000440919 MT1FP04733 61 aa7.29□□□□□ -1.24
SATB2-204ENST00000440919 LCE3AQ5TA76 89 aa7.22□□□□□ -1.25
SATB2-204ENST00000440919 KRTAP19-8Q3LI54 63 aa7.16□□□□□ -1.26
SATB2-204ENST00000440919 A0A0A0MQY5 61 aa7.12□□□□□ -1.27
SATB2-204ENST00000440919 MT1BP07438 61 aa7.07□□□□□ -1.28
SATB2-204ENST00000440919 LCE2AQ5TA79 106 aaPredicted RBP7.06□□□□□ -1.28
SATB2-204ENST00000440919 KRTAP10-5P60370 271 aa7.05□□□□□ -1.28
SATB2-204ENST00000440919 KRTAP8-1Q8IUC2 63 aa7.05□□□□□ -1.28
SATB2-204ENST00000440919 KRTAP9-3Q9BYQ3 159 aa7.04□□□□□ -1.28
SATB2-204ENST00000440919 MT1XP80297 61 aa7.03□□□□□ -1.28
SATB2-204ENST00000440919 KRTAP10-12P60413 245 aa6.91□□□□□ -1.3
SATB2-204ENST00000440919 KRTAP12-3P60328 96 aa6.86□□□□□ -1.31
SATB2-204ENST00000440919 KRTAP10-7P60409 375 aaPredicted RBP6.84□□□□□ -1.31
SATB2-204ENST00000440919 LCE2BO14633 110 aa6.81□□□□□ -1.32
SATB2-204ENST00000440919 PRO2289Q9P1D8 64 aa6.73□□□□□ -1.33
SATB2-204ENST00000440919 KRTAP19-5Q3LI72 72 aa6.56□□□□□ -1.36
SATB2-204ENST00000440919 USH2AO75445 5202 aa6.55□□□□□ -1.36
SATB2-204ENST00000440919 KMT2DO14686 5537 aa6.49□□□□□ -1.37
SATB2-204ENST00000440919 INE1O15225 51 aa6.48□□□□□ -1.37
SATB2-204ENST00000440919 LCE3CQ5T5A8 94 aa6.47□□□□□ -1.37
SATB2-204ENST00000440919 KRTAP4-8A0A0G2JLE6 195 aa6.39□□□□□ -1.39
SATB2-204ENST00000440919 KRTAP4-8Q9BYQ9 185 aa6.39□□□□□ -1.39
SATB2-204ENST00000440919 SSPOA2VEC9 5147 aa6.33□□□□□ -1.4
SATB2-204ENST00000440919 KRTAP19-6Q3LI70 58 aa6.32□□□□□ -1.4
SATB2-204ENST00000440919 LCE2DQ5TA82 110 aaPredicted RBP6.31□□□□□ -1.4
SATB2-204ENST00000440919 KRTAP19-7Q3SYF9 63 aa6.27□□□□□ -1.41
SATB2-204ENST00000440919 KRTAP9-6A8MVA2 160 aa6.26□□□□□ -1.41
SATB2-204ENST00000440919 FSIP2Q5CZC0 6907 aa6.2□□□□□ -1.42
SATB2-204ENST00000440919 KRTAP4-7Q9BYR0 210 aa6.14□□□□□ -1.43
SATB2-204ENST00000440919 KRTAP19-4Q3LI73 84 aa6.1□□□□□ -1.43
SATB2-204ENST00000440919 MT1LQ93083 61 aa6.09□□□□□ -1.43
SATB2-204ENST00000440919 MT1EP04732 61 aa6.08□□□□□ -1.44
SATB2-204ENST00000440919 KRTAP2-3P0C7H8 128 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms