RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 LINC00208Q96KT6 92 aa10.83□□□□□ -0.68
VARS-217ENST00000440048 MP68P56378 58 aa10.78□□□□□ -0.68
VARS-217ENST00000440048 KLKP1Q107X0 134 aa10.77□□□□□ -0.69
VARS-217ENST00000440048 A8MUN3 132 aa10.69□□□□□ -0.7
VARS-217ENST00000440048 SCGB1A1P11684 91 aa10.67□□□□□ -0.7
VARS-217ENST00000440048 NDUFC1O43677 76 aa10.66□□□□□ -0.7
VARS-217ENST00000440048 SPRR2GQ9BYE4 73 aa10.65□□□□□ -0.7
VARS-217ENST00000440048 H3BPC8 53 aa10.64□□□□□ -0.71
VARS-217ENST00000440048 MACF1Q9UPN3 7388 aaKnown RBP10.63□□□□□ -0.71
VARS-217ENST00000440048 IMUPQ9GZP8 106 aa10.6□□□□□ -0.71
VARS-217ENST00000440048 K7ERU9 68 aa10.59□□□□□ -0.71
VARS-217ENST00000440048 MT-ATP8P03928 68 aa10.58□□□□□ -0.72
VARS-217ENST00000440048 KRTAP19-8Q3LI54 63 aa10.57□□□□□ -0.72
VARS-217ENST00000440048 MT1BP07438 61 aa10.56□□□□□ -0.72
VARS-217ENST00000440048 Q5VV11 94 aa10.54□□□□□ -0.72
VARS-217ENST00000440048 SYNE2Q8WXH0 6885 aaKnown RBP10.52□□□□□ -0.72
VARS-217ENST00000440048 H0YAA0 97 aa10.52□□□□□ -0.73
VARS-217ENST00000440048 CRIPTQ9P021 101 aa10.52□□□□□ -0.73
VARS-217ENST00000440048 DMAC1Q96GE9 116 aa10.46□□□□□ -0.73
VARS-217ENST00000440048 ADM2Q7Z4H4 148 aa10.43□□□□□ -0.74
VARS-217ENST00000440048 TRAV7A0A075B6U4 112 aa10.41□□□□□ -0.74
VARS-217ENST00000440048 SMIM20Q8N5G0 67 aa10.41□□□□□ -0.74
VARS-217ENST00000440048 A6NN06 94 aa10.36□□□□□ -0.75
VARS-217ENST00000440048 KRTAP6-3Q3LI67 103 aa10.36□□□□□ -0.75
VARS-217ENST00000440048 KRTAP10-5P60370 271 aa10.28□□□□□ -0.76
VARS-217ENST00000440048 P0C880 135 aa10.23□□□□□ -0.77
VARS-217ENST00000440048 ACYP2P14621 99 aa10.23□□□□□ -0.77
VARS-217ENST00000440048 SNURFQ9Y675 71 aa10.2□□□□□ -0.78
VARS-217ENST00000440048 C20orf197Q8N268 126 aa10.18□□□□□ -0.78
VARS-217ENST00000440048 KRTAP3-2Q9BYR7 98 aa10.17□□□□□ -0.78
VARS-217ENST00000440048 R4GN34 69 aa10.14□□□□□ -0.79
VARS-217ENST00000440048 SERP2Q8N6R1 65 aa10.11□□□□□ -0.79
VARS-217ENST00000440048 M0QZ58 72 aa10.08□□□□□ -0.8
VARS-217ENST00000440048 SPTSSBQ8NFR3 76 aa10.07□□□□□ -0.8
VARS-217ENST00000440048 CHKB-CPT1BH3BT56 60 aa10.03□□□□□ -0.8
VARS-217ENST00000440048 SPANXA2-OT1Q8N9U9 137 aa10.03□□□□□ -0.8
VARS-217ENST00000440048 PLAC4Q8WY50 150 aa10.01□□□□□ -0.81
VARS-217ENST00000440048 MT1XP80297 61 aa9.94□□□□□ -0.82
VARS-217ENST00000440048 PRO2289Q9P1D8 64 aa9.93□□□□□ -0.82
VARS-217ENST00000440048 LINC01554Q52M75 96 aa9.92□□□□□ -0.82
VARS-217ENST00000440048 NEBP20929 6669 aa9.92□□□□□ -0.82
VARS-217ENST00000440048 MUC12Q9UKN1 5478 aa9.91□□□□□ -0.82
VARS-217ENST00000440048 KRTAP5-9P26371 169 aa9.85□□□□□ -0.83
VARS-217ENST00000440048 COX7CP15954 63 aa9.83□□□□□ -0.84
VARS-217ENST00000440048 KMT2DO14686 5537 aa9.75□□□□□ -0.85
VARS-217ENST00000440048 COA5Q86WW8 74 aa9.75□□□□□ -0.85
VARS-217ENST00000440048 MDN1Q9NU22 5596 aa9.68□□□□□ -0.86
VARS-217ENST00000440048 CYSTM1Q9H1C7 97 aa9.68□□□□□ -0.86
VARS-217ENST00000440048 H7BZZ5 65 aa9.66□□□□□ -0.86
VARS-217ENST00000440048 KRTAP12-2P59991 146 aa9.65□□□□□ -0.86
VARS-217ENST00000440048 KRTAP13-4Q3LI77 160 aa9.62□□□□□ -0.87
VARS-217ENST00000440048 KRTAP20-1Q3LI63 56 aa9.61□□□□□ -0.87
VARS-217ENST00000440048 ANAPC13Q9BS18 74 aa9.55□□□□□ -0.88
VARS-217ENST00000440048 PCP4P48539 62 aa9.53□□□□□ -0.88
VARS-217ENST00000440048 SPRR2FQ96RM1 72 aa9.53□□□□□ -0.88
VARS-217ENST00000440048 KRTAP8-1Q8IUC2 63 aa9.52□□□□□ -0.89
VARS-217ENST00000440048 SEC61GP60059 68 aa9.51□□□□□ -0.89
VARS-217ENST00000440048 KRTAP10-7P60409 375 aaPredicted RBP9.49□□□□□ -0.89
VARS-217ENST00000440048 SERP1Q9Y6X1 66 aa9.49□□□□□ -0.89
VARS-217ENST00000440048 KRTAP4-8A0A0G2JLE6 195 aa9.46□□□□□ -0.9
VARS-217ENST00000440048 KRTAP4-8Q9BYQ9 185 aa9.46□□□□□ -0.9
VARS-217ENST00000440048 KRTAP10-12P60413 245 aa9.43□□□□□ -0.9
VARS-217ENST00000440048 SPRR2EP22531 72 aa9.4□□□□□ -0.9
VARS-217ENST00000440048 SPRR2BP35325 72 aa9.4□□□□□ -0.9
VARS-217ENST00000440048 SPRR2AP35326 72 aa9.4□□□□□ -0.9
VARS-217ENST00000440048 CCDC179H3BU77 68 aa9.38□□□□□ -0.91
VARS-217ENST00000440048 KRTAP2-3P0C7H8 128 aa9.38□□□□□ -0.91
VARS-217ENST00000440048 KRTAP2-4Q9BYR9 128 aa9.38□□□□□ -0.91
VARS-217ENST00000440048 A0A1B0GU33 70 aa9.35□□□□□ -0.91
VARS-217ENST00000440048 CAMK2N1Q7Z7J9 78 aa9.35□□□□□ -0.91
VARS-217ENST00000440048 SPATA8Q6RVD6 105 aa9.34□□□□□ -0.91
VARS-217ENST00000440048 A0A0D9SG42 100 aa9.33□□□□□ -0.92
VARS-217ENST00000440048 LCE1AQ5T7P2 110 aa9.26□□□□□ -0.93
VARS-217ENST00000440048 A0A1B0GU69 56 aa9.24□□□□□ -0.93
VARS-217ENST00000440048 ATP5EP56381 51 aaPredicted RBP9.19□□□□□ -0.94
VARS-217ENST00000440048 SPINT4Q6UDR6 99 aa9.18□□□□□ -0.94
VARS-217ENST00000440048 KRTAP12-1P59990 96 aa9.15□□□□□ -0.94
VARS-217ENST00000440048 SPRR2DP22532 72 aa9.1□□□□□ -0.95
VARS-217ENST00000440048 SMIM26A0A096LP01 95 aa9.08□□□□□ -0.96
VARS-217ENST00000440048 KRTAP2-2Q9BYT5 123 aa9.08□□□□□ -0.96
VARS-217ENST00000440048 KRTAP2-1Q9BYU5 128 aa9.08□□□□□ -0.96
VARS-217ENST00000440048 A8MU10 97 aa9.03□□□□□ -0.96
VARS-217ENST00000440048 TMEM258P61165 79 aa9.01□□□□□ -0.97
VARS-217ENST00000440048 PRR15LQ9BU68 103 aa9□□□□□ -0.97
VARS-217ENST00000440048 LINC01558Q9Y6Z2 57 aa8.97□□□□□ -0.97
VARS-217ENST00000440048 KRTAP19-7Q3SYF9 63 aa8.88□□□□□ -0.99
VARS-217ENST00000440048 LCE3BQ5TA77 95 aa8.86□□□□□ -0.99
VARS-217ENST00000440048 MT1EP04732 61 aa8.79□□□□□ -1
VARS-217ENST00000440048 C10orf95Q9H7T3 257 aa8.74□□□□□ -1.01
VARS-217ENST00000440048 UQCR11O14957 56 aa8.71□□□□□ -1.02
VARS-217ENST00000440048 KRTAP19-5Q3LI72 72 aa8.7□□□□□ -1.02
VARS-217ENST00000440048 LCE5AQ5TCM9 118 aa8.69□□□□□ -1.02
VARS-217ENST00000440048 KRTAP19-3Q7Z4W3 81 aa8.68□□□□□ -1.02
VARS-217ENST00000440048 TNP1P09430 55 aa8.66□□□□□ -1.02
VARS-217ENST00000440048 LCE3AQ5TA76 89 aa8.58□□□□□ -1.04
VARS-217ENST00000440048 RPS28P62857 69 aaKnown RBP8.54□□□□□ -1.04
VARS-217ENST00000440048 MIR22HGQ0VDD5 57 aa8.53□□□□□ -1.04
VARS-217ENST00000440048 DSTQ03001 7570 aaKnown RBP8.5□□□□□ -1.05
VARS-217ENST00000440048 V9GYY9 64 aa8.5□□□□□ -1.05
VARS-217ENST00000440048 MT1GP13640 62 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms