RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 NDUFS5O43920 106 aa2.69□□□□□ -1.98
EDEM3-203ENST00000439962 ACYP2P14621 99 aa2.69□□□□□ -1.98
EDEM3-203ENST00000439962 BRK1Q8WUW1 75 aa2.68□□□□□ -1.98
EDEM3-203ENST00000439962 Q5VV11 94 aa2.68□□□□□ -1.98
EDEM3-203ENST00000439962 DMAC1Q96GE9 116 aa2.68□□□□□ -1.98
EDEM3-203ENST00000439962 IGKV2-30P06310 120 aa2.67□□□□□ -1.98
EDEM3-203ENST00000439962 LCE1DQ5T752 114 aa2.67□□□□□ -1.98
EDEM3-203ENST00000439962 KRTAP16-1A8MUX0 517 aa2.67□□□□□ -1.98
EDEM3-203ENST00000439962 KRTAP4-9Q9BYQ8 210 aa2.67□□□□□ -1.98
EDEM3-203ENST00000439962 C9orf92A6NGG3 77 aa2.67□□□□□ -1.98
EDEM3-203ENST00000439962 HRES1P13985 223 aa2.66□□□□□ -1.98
EDEM3-203ENST00000439962 Q5W150 140 aa2.66□□□□□ -1.98
EDEM3-203ENST00000439962 NOTCH2NLQ7Z3S9 236 aa2.66□□□□□ -1.98
EDEM3-203ENST00000439962 KRTAP4-2Q9BYR5 136 aa2.66□□□□□ -1.98
EDEM3-203ENST00000439962 A8MUN3 132 aa2.65□□□□□ -1.98
EDEM3-203ENST00000439962 PCOTHQ58A44 107 aa2.65□□□□□ -1.98
EDEM3-203ENST00000439962 PRR15LQ9BU68 103 aa2.65□□□□□ -1.99
EDEM3-203ENST00000439962 ATP11AUNQ6ZP68 121 aa2.64□□□□□ -1.99
EDEM3-203ENST00000439962 CDC42SE1Q9NRR8 79 aa2.64□□□□□ -1.99
EDEM3-203ENST00000439962 PSPHP1O15172 72 aa2.63□□□□□ -1.99
EDEM3-203ENST00000439962 CHKB-CPT1BH3BT56 60 aa2.63□□□□□ -1.99
EDEM3-203ENST00000439962 FSIP2Q5CZC0 6907 aa2.63□□□□□ -1.99
EDEM3-203ENST00000439962 IGKV2D-30A0A075B6S6 120 aa2.62□□□□□ -1.99
EDEM3-203ENST00000439962 C7orf65Q6ZTY9 151 aa2.61□□□□□ -1.99
EDEM3-203ENST00000439962 A6NED7 52 aa2.6□□□□□ -1.99
EDEM3-203ENST00000439962 SPTSSBQ8NFR3 76 aa2.6□□□□□ -1.99
EDEM3-203ENST00000439962 C20orf166-AS1Q96NR2 134 aa2.6□□□□□ -1.99
EDEM3-203ENST00000439962 A8MUU9 505 aa2.59□□□□□ -1.99
EDEM3-203ENST00000439962 PMAIP1Q13794 54 aa2.59□□□□□ -1.99
EDEM3-203ENST00000439962 H3BS24 57 aa2.59□□□□□ -2
EDEM3-203ENST00000439962 LCA10Q71F78 164 aa2.58□□□□□ -2
EDEM3-203ENST00000439962 A0A1B0GU69 56 aa2.57□□□□□ -2
EDEM3-203ENST00000439962 LORP23490 312 aaPredicted RBP2.57□□□□□ -2
EDEM3-203ENST00000439962 LCE2CQ5TA81 110 aa2.57□□□□□ -2
EDEM3-203ENST00000439962 SPATA8Q6RVD6 105 aa2.56□□□□□ -2
EDEM3-203ENST00000439962 KTN1-AS1Q86SY8 53 aa2.56□□□□□ -2
EDEM3-203ENST00000439962 A6NN06 94 aa2.56□□□□□ -2
EDEM3-203ENST00000439962 TPRXLQ17RH7 258 aa2.55□□□□□ -2
EDEM3-203ENST00000439962 UQCR11O14957 56 aa2.55□□□□□ -2
EDEM3-203ENST00000439962 KRTAP4-1Q9BYQ7 146 aa2.54□□□□□ -2
EDEM3-203ENST00000439962 SPINK7P58062 85 aa2.54□□□□□ -2
EDEM3-203ENST00000439962 A0A0A0MQY5 61 aa2.51□□□□□ -2.01
EDEM3-203ENST00000439962 MIR22HGQ0VDD5 57 aa2.51□□□□□ -2.01
EDEM3-203ENST00000439962 SEC61BP60468 96 aaKnown RBP2.51□□□□□ -2.01
EDEM3-203ENST00000439962 COX6B2Q6YFQ2 88 aa2.5□□□□□ -2.01
EDEM3-203ENST00000439962 MUC17Q685J3 4493 aa2.49□□□□□ -2.01
EDEM3-203ENST00000439962 M0R2T5 61 aa2.49□□□□□ -2.01
EDEM3-203ENST00000439962 A8MU10 97 aa2.48□□□□□ -2.01
EDEM3-203ENST00000439962 RPL37P61927 97 aaKnown RBP2.47□□□□□ -2.01
EDEM3-203ENST00000439962 KRTAP4-11Q9BYQ6 195 aa2.47□□□□□ -2.01
EDEM3-203ENST00000439962 KRTAP19-1Q8IUB9 90 aa2.45□□□□□ -2.02
EDEM3-203ENST00000439962 KRTAP3-1Q9BYR8 98 aa2.45□□□□□ -2.02
EDEM3-203ENST00000439962 H1FX-AS1Q4G0G2 97 aa2.44□□□□□ -2.02
EDEM3-203ENST00000439962 USH2AO75445 5202 aa2.44□□□□□ -2.02
EDEM3-203ENST00000439962 A0A1B0GU33 70 aa2.43□□□□□ -2.02
EDEM3-203ENST00000439962 RBM12B-AS1Q9P1G2 102 aa2.43□□□□□ -2.02
EDEM3-203ENST00000439962 GPR98Q8WXG9 6306 aa2.42□□□□□ -2.02
EDEM3-203ENST00000439962 K7ERS5 55 aa2.41□□□□□ -2.02
EDEM3-203ENST00000439962 H0YAA0 97 aa2.4□□□□□ -2.02
EDEM3-203ENST00000439962 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
EDEM3-203ENST00000439962 MT1HP80294 61 aa2.39□□□□□ -2.03
EDEM3-203ENST00000439962 S4R3F8 94 aa2.39□□□□□ -2.03
EDEM3-203ENST00000439962 FLGP20930 4061 aaPredicted RBP2.38□□□□□ -2.03
EDEM3-203ENST00000439962 KRTAP19-2Q3LHN2 52 aa2.38□□□□□ -2.03
EDEM3-203ENST00000439962 KRTAP10-6P60371 365 aaPredicted RBP2.35□□□□□ -2.03
EDEM3-203ENST00000439962 LINC01554Q52M75 96 aa2.35□□□□□ -2.03
EDEM3-203ENST00000439962 M0QZ58 72 aa2.33□□□□□ -2.04
EDEM3-203ENST00000439962 CSAG1Q6PB30 78 aa2.32□□□□□ -2.04
EDEM3-203ENST00000439962 KRTAP25-1Q3LHN0 102 aa2.31□□□□□ -2.04
EDEM3-203ENST00000439962 ROMO1P60602 79 aa2.31□□□□□ -2.04
EDEM3-203ENST00000439962 PRAC1Q96KF2 57 aa2.31□□□□□ -2.04
EDEM3-203ENST00000439962 ADM2Q7Z4H4 148 aa2.3□□□□□ -2.04
EDEM3-203ENST00000439962 KRTAP10-10P60014 251 aa2.29□□□□□ -2.04
EDEM3-203ENST00000439962 KRTAP13-4Q3LI77 160 aa2.27□□□□□ -2.05
EDEM3-203ENST00000439962 SSPOA2VEC9 5147 aa2.26□□□□□ -2.05
EDEM3-203ENST00000439962 P0C880 135 aa2.25□□□□□ -2.05
EDEM3-203ENST00000439962 CRCT1Q9UGL9 99 aa2.25□□□□□ -2.05
EDEM3-203ENST00000439962 MT1FP04733 61 aa2.24□□□□□ -2.05
EDEM3-203ENST00000439962 MT2AP02795 61 aa2.24□□□□□ -2.05
EDEM3-203ENST00000439962 KRTAP12-1P59990 96 aa2.24□□□□□ -2.05
EDEM3-203ENST00000439962 SYNE2Q8WXH0 6885 aaKnown RBP2.22□□□□□ -2.05
EDEM3-203ENST00000439962 CRIPTQ9P021 101 aa2.22□□□□□ -2.05
EDEM3-203ENST00000439962 KRTAP12-2P59991 146 aa2.21□□□□□ -2.06
EDEM3-203ENST00000439962 A0A0D9SG42 100 aa2.2□□□□□ -2.06
EDEM3-203ENST00000439962 FCGBPQ9Y6R7 5405 aaPredicted RBP2.2□□□□□ -2.06
EDEM3-203ENST00000439962 MACF1Q9UPN3 7388 aaKnown RBP2.19□□□□□ -2.06
EDEM3-203ENST00000439962 R4GN34 69 aa2.19□□□□□ -2.06
EDEM3-203ENST00000439962 SPINT4Q6UDR6 99 aa2.16□□□□□ -2.06
EDEM3-203ENST00000439962 KRTAP9-3Q9BYQ3 159 aa2.16□□□□□ -2.06
EDEM3-203ENST00000439962 KMT2DO14686 5537 aa2.16□□□□□ -2.06
EDEM3-203ENST00000439962 PP632Q6XCG6 107 aa2.15□□□□□ -2.07
EDEM3-203ENST00000439962 KRTAP23-1A1A580 65 aa2.15□□□□□ -2.07
EDEM3-203ENST00000439962 LCE5AQ5TCM9 118 aa2.13□□□□□ -2.07
EDEM3-203ENST00000439962 KRTAP15-1Q3LI76 137 aa2.1□□□□□ -2.07
EDEM3-203ENST00000439962 MUC12Q9UKN1 5478 aa2.09□□□□□ -2.07
EDEM3-203ENST00000439962 C10orf95Q9H7T3 257 aa2.09□□□□□ -2.08
EDEM3-203ENST00000439962 KRTAP9-7A8MTY7 169 aa2.06□□□□□ -2.08
EDEM3-203ENST00000439962 SPRR2GQ9BYE4 73 aa2.06□□□□□ -2.08
EDEM3-203ENST00000439962 CAMK2N1Q7Z7J9 78 aa2.06□□□□□ -2.08
EDEM3-203ENST00000439962 TNP1P09430 55 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms