RNA–Protein interactions for RNA: ENST00000438412.5

HCG18-236, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,440 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-236ENST00000438412 XP32Q5T750 250 aa6.63□□□□□ -1.35
HCG18-236ENST00000438412 KRTAP4-5Q9BYR2 181 aa6.62□□□□□ -1.35
HCG18-236ENST00000438412 MIR22HGQ0VDD5 57 aa6.59□□□□□ -1.35
HCG18-236ENST00000438412 RPL37P61927 97 aaKnown RBP6.57□□□□□ -1.36
HCG18-236ENST00000438412 UQCR11O14957 56 aa6.57□□□□□ -1.36
HCG18-236ENST00000438412 COX6B2Q6YFQ2 88 aa6.56□□□□□ -1.36
HCG18-236ENST00000438412 SPATA8Q6RVD6 105 aa6.56□□□□□ -1.36
HCG18-236ENST00000438412 ADM2Q7Z4H4 148 aa6.52□□□□□ -1.37
HCG18-236ENST00000438412 KTN1-AS1Q86SY8 53 aa6.52□□□□□ -1.37
HCG18-236ENST00000438412 H0YAA0 97 aa6.51□□□□□ -1.37
HCG18-236ENST00000438412 SEC61GP60059 68 aa6.51□□□□□ -1.37
HCG18-236ENST00000438412 HERC2O95714 4834 aa6.5□□□□□ -1.37
HCG18-236ENST00000438412 PRAC1Q96KF2 57 aa6.48□□□□□ -1.37
HCG18-236ENST00000438412 MUC2Q02817 5179 aa6.45□□□□□ -1.38
HCG18-236ENST00000438412 A0A1B0GU33 70 aa6.43□□□□□ -1.38
HCG18-236ENST00000438412 H1FX-AS1Q4G0G2 97 aa6.41□□□□□ -1.38
HCG18-236ENST00000438412 RBM12B-AS1Q9P1G2 102 aa6.37□□□□□ -1.39
HCG18-236ENST00000438412 S4R3F8 94 aa6.37□□□□□ -1.39
HCG18-236ENST00000438412 KRTAP10-6P60371 365 aaPredicted RBP6.37□□□□□ -1.39
HCG18-236ENST00000438412 MUC17Q685J3 4493 aa6.36□□□□□ -1.39
HCG18-236ENST00000438412 KRTAP13-4Q3LI77 160 aa6.36□□□□□ -1.39
HCG18-236ENST00000438412 HERC1Q15751 4861 aa6.34□□□□□ -1.39
HCG18-236ENST00000438412 TPRXLQ17RH7 258 aa6.34□□□□□ -1.4
HCG18-236ENST00000438412 P0C880 135 aa6.33□□□□□ -1.4
HCG18-236ENST00000438412 A0A0D9SG42 100 aa6.3□□□□□ -1.4
HCG18-236ENST00000438412 BIRC6Q9NR09 4857 aa6.26□□□□□ -1.41
HCG18-236ENST00000438412 PCLOQ9Y6V0 5065 aa6.26□□□□□ -1.41
HCG18-236ENST00000438412 KRTAP4-1Q9BYQ7 146 aa6.25□□□□□ -1.41
HCG18-236ENST00000438412 CSAG1Q6PB30 78 aa6.24□□□□□ -1.41
HCG18-236ENST00000438412 J3QL48 77 aa6.22□□□□□ -1.41
HCG18-236ENST00000438412 CRIPTQ9P021 101 aa6.22□□□□□ -1.41
HCG18-236ENST00000438412 FAT4Q6V0I7 4981 aa6.13□□□□□ -1.43
HCG18-236ENST00000438412 KRTAP12-2P59991 146 aa6.11□□□□□ -1.43
HCG18-236ENST00000438412 HMCN2Q8NDA2 5059 aa6.1□□□□□ -1.43
HCG18-236ENST00000438412 SEC61BP60468 96 aaKnown RBP6.08□□□□□ -1.44
HCG18-236ENST00000438412 K7ERS5 55 aa6.06□□□□□ -1.44
HCG18-236ENST00000438412 LORP23490 312 aaPredicted RBP6.05□□□□□ -1.44
HCG18-236ENST00000438412 SPINT4Q6UDR6 99 aa6.05□□□□□ -1.44
HCG18-236ENST00000438412 RNF213Q63HN8 5207 aa6.04□□□□□ -1.44
HCG18-236ENST00000438412 LCE2BO14633 110 aa6.03□□□□□ -1.44
HCG18-236ENST00000438412 LINC01554Q52M75 96 aa6.03□□□□□ -1.44
HCG18-236ENST00000438412 KRTAP19-2Q3LHN2 52 aa6.03□□□□□ -1.44
HCG18-236ENST00000438412 FLGP20930 4061 aaPredicted RBP6.02□□□□□ -1.45
HCG18-236ENST00000438412 KRTAP12-1P59990 96 aa6.01□□□□□ -1.45
HCG18-236ENST00000438412 KRTAP25-1Q3LHN0 102 aa6□□□□□ -1.45
HCG18-236ENST00000438412 UBR4Q5T4S7 5183 aa6□□□□□ -1.45
HCG18-236ENST00000438412 ROMO1P60602 79 aa5.99□□□□□ -1.45
HCG18-236ENST00000438412 C10orf95Q9H7T3 257 aa5.98□□□□□ -1.45
HCG18-236ENST00000438412 M0QZ58 72 aa5.98□□□□□ -1.45
HCG18-236ENST00000438412 R4GN34 69 aa5.92□□□□□ -1.46
HCG18-236ENST00000438412 LCE2CQ5TA81 110 aa5.74□□□□□ -1.49
HCG18-236ENST00000438412 LCE2AQ5TA79 106 aaPredicted RBP5.68□□□□□ -1.5
HCG18-236ENST00000438412 M0R2T5 61 aa5.6□□□□□ -1.51
HCG18-236ENST00000438412 CAMK2N1Q7Z7J9 78 aa5.6□□□□□ -1.51
HCG18-236ENST00000438412 MT1HP80294 61 aa5.58□□□□□ -1.52
HCG18-236ENST00000438412 KRTAP19-1Q8IUB9 90 aa5.5□□□□□ -1.53
HCG18-236ENST00000438412 MT1FP04733 61 aa5.49□□□□□ -1.53
HCG18-236ENST00000438412 MT2AP02795 61 aa5.46□□□□□ -1.54
HCG18-236ENST00000438412 KRTAP15-1Q3LI76 137 aa5.45□□□□□ -1.54
HCG18-236ENST00000438412 KRTAP10-10P60014 251 aa5.44□□□□□ -1.54
HCG18-236ENST00000438412 KRTAP9-8Q9BYQ0 159 aa5.43□□□□□ -1.54
HCG18-236ENST00000438412 SPRR2GQ9BYE4 73 aa5.43□□□□□ -1.54
HCG18-236ENST00000438412 USH2AO75445 5202 aa5.37□□□□□ -1.55
HCG18-236ENST00000438412 H3BS24 57 aa5.34□□□□□ -1.55
HCG18-236ENST00000438412 PLAC4Q8WY50 150 aa5.33□□□□□ -1.56
HCG18-236ENST00000438412 NDUFAF8A1L188 74 aa5.32□□□□□ -1.56
HCG18-236ENST00000438412 TNP1P09430 55 aa5.31□□□□□ -1.56
HCG18-236ENST00000438412 MT1BP07438 61 aa5.24□□□□□ -1.57
HCG18-236ENST00000438412 PP632Q6XCG6 107 aa5.23□□□□□ -1.57
HCG18-236ENST00000438412 KMT2DO14686 5537 aa5.2□□□□□ -1.58
HCG18-236ENST00000438412 KRTAP19-8Q3LI54 63 aa5.19□□□□□ -1.58
HCG18-236ENST00000438412 KRTAP9-3Q9BYQ3 159 aa5.19□□□□□ -1.58
HCG18-236ENST00000438412 LCE3AQ5TA76 89 aa5.18□□□□□ -1.58
HCG18-236ENST00000438412 KRTAP10-5P60370 271 aa5.17□□□□□ -1.58
HCG18-236ENST00000438412 MT1XP80297 61 aa5.17□□□□□ -1.58
HCG18-236ENST00000438412 KRTAP10-7P60409 375 aaPredicted RBP5.07□□□□□ -1.6
HCG18-236ENST00000438412 FSIP2Q5CZC0 6907 aa5.06□□□□□ -1.6
HCG18-236ENST00000438412 KRTAP23-1A1A580 65 aa5.04□□□□□ -1.6
HCG18-236ENST00000438412 LOC100996750A0A140TA64 210 aa4.99□□□□□ -1.61
HCG18-236ENST00000438412 KRTAP4-6Q9BYQ5 205 aa4.99□□□□□ -1.61
HCG18-236ENST00000438412 KRTAP10-12P60413 245 aa4.97□□□□□ -1.61
HCG18-236ENST00000438412 LUZP6Q538Z0 58 aa4.93□□□□□ -1.62
HCG18-236ENST00000438412 KRTAP8-1Q8IUC2 63 aa4.93□□□□□ -1.62
HCG18-236ENST00000438412 SPRR5A0A1B0GTR4 108 aa4.9□□□□□ -1.62
HCG18-236ENST00000438412 KRTAP12-3P60328 96 aa4.88□□□□□ -1.63
HCG18-236ENST00000438412 SSPOA2VEC9 5147 aa4.88□□□□□ -1.63
HCG18-236ENST00000438412 KRTAP4-8A0A0G2JLE6 195 aa4.86□□□□□ -1.63
HCG18-236ENST00000438412 KRTAP4-8Q9BYQ9 185 aa4.86□□□□□ -1.63
HCG18-236ENST00000438412 PRO2289Q9P1D8 64 aa4.84□□□□□ -1.63
HCG18-236ENST00000438412 KRTAP19-5Q3LI72 72 aa4.8□□□□□ -1.64
HCG18-236ENST00000438412 FCGBPQ9Y6R7 5405 aaPredicted RBP4.63□□□□□ -1.67
HCG18-236ENST00000438412 KRTAP4-7Q9BYR0 210 aa4.62□□□□□ -1.67
HCG18-236ENST00000438412 KRTAP19-7Q3SYF9 63 aa4.61□□□□□ -1.67
HCG18-236ENST00000438412 MUC12Q9UKN1 5478 aa4.59□□□□□ -1.67
HCG18-236ENST00000438412 LCE3CQ5T5A8 94 aa4.57□□□□□ -1.68
HCG18-236ENST00000438412 KRTAP9-2Q9BYQ4 174 aa4.54□□□□□ -1.68
HCG18-236ENST00000438412 KRTAP9-6A8MVA2 160 aa4.53□□□□□ -1.68
HCG18-236ENST00000438412 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.52□□□□□ -1.69
HCG18-236ENST00000438412 A0A0A0MQY5 61 aa4.51□□□□□ -1.69
HCG18-236ENST00000438412 KRTAP9-6A0A140TA67 174 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms