RNA–Protein interactions for RNA: ENST00000436949.5

SEMA3A-204, Transcript of semaphorin 3A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEMA3A, Length 2,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-204ENST00000436949 SMR3BP02814 79 aaPredicted RBP3.65□□□□□ -1.83
SEMA3A-204ENST00000436949 DMBT1Q9UGM3 2413 aaPredicted RBP3.65□□□□□ -1.83
SEMA3A-204ENST00000436949 H0YAA0 97 aa3.64□□□□□ -1.83
SEMA3A-204ENST00000436949 LINC00304Q8N9R0 145 aa3.63□□□□□ -1.83
SEMA3A-204ENST00000436949 KRTAP3-1Q9BYR8 98 aa3.63□□□□□ -1.83
SEMA3A-204ENST00000436949 MYCBP2O75592 4640 aa3.63□□□□□ -1.83
SEMA3A-204ENST00000436949 FLG2Q5D862 2391 aaPredicted RBP3.62□□□□□ -1.83
SEMA3A-204ENST00000436949 Q5VSD8 79 aa3.61□□□□□ -1.83
SEMA3A-204ENST00000436949 FAT1Q14517 4588 aa3.61□□□□□ -1.83
SEMA3A-204ENST00000436949 LORP23490 312 aaPredicted RBP3.6□□□□□ -1.83
SEMA3A-204ENST00000436949 HMCN2Q8NDA2 5059 aa3.59□□□□□ -1.83
SEMA3A-204ENST00000436949 CRIPTQ9P021 101 aa3.58□□□□□ -1.84
SEMA3A-204ENST00000436949 A0A1B0GU33 70 aa3.58□□□□□ -1.84
SEMA3A-204ENST00000436949 A8MUU9 505 aa3.58□□□□□ -1.84
SEMA3A-204ENST00000436949 UBR4Q5T4S7 5183 aa3.57□□□□□ -1.84
SEMA3A-204ENST00000436949 C20orf166-AS1Q96NR2 134 aa3.57□□□□□ -1.84
SEMA3A-204ENST00000436949 H1FX-AS1Q4G0G2 97 aa3.56□□□□□ -1.84
SEMA3A-204ENST00000436949 RPS29P62273 56 aaKnown RBP3.54□□□□□ -1.84
SEMA3A-204ENST00000436949 PKHD1L1Q86WI1 4243 aa3.53□□□□□ -1.84
SEMA3A-204ENST00000436949 KRTAP9-6A0A140TA67 174 aa3.53□□□□□ -1.85
SEMA3A-204ENST00000436949 KRTAP25-1Q3LHN0 102 aa3.52□□□□□ -1.85
SEMA3A-204ENST00000436949 COX6B2Q6YFQ2 88 aa3.52□□□□□ -1.85
SEMA3A-204ENST00000436949 KRTAP10-4P60372 401 aaPredicted RBP3.51□□□□□ -1.85
SEMA3A-204ENST00000436949 LRP1Q07954 4544 aaKnown RBP3.49□□□□□ -1.85
SEMA3A-204ENST00000436949 A0A0D9SG42 100 aa3.48□□□□□ -1.85
SEMA3A-204ENST00000436949 KRTAP13-4Q3LI77 160 aa3.48□□□□□ -1.85
SEMA3A-204ENST00000436949 FAT3Q8TDW7 4589 aa3.47□□□□□ -1.85
SEMA3A-204ENST00000436949 KRTAP10-6P60371 365 aaPredicted RBP3.46□□□□□ -1.86
SEMA3A-204ENST00000436949 KRTAP10-8P60410 259 aa3.46□□□□□ -1.86
SEMA3A-204ENST00000436949 ROMO1P60602 79 aa3.45□□□□□ -1.86
SEMA3A-204ENST00000436949 K7ERS5 55 aa3.44□□□□□ -1.86
SEMA3A-204ENST00000436949 KRTAP9-2Q9BYQ4 174 aa3.42□□□□□ -1.86
SEMA3A-204ENST00000436949 RNF213Q63HN8 5207 aa3.42□□□□□ -1.86
SEMA3A-204ENST00000436949 TNXBP22105 4242 aa3.41□□□□□ -1.86
SEMA3A-204ENST00000436949 P0C880 135 aa3.41□□□□□ -1.86
SEMA3A-204ENST00000436949 RPL37P61927 97 aaKnown RBP3.41□□□□□ -1.86
SEMA3A-204ENST00000436949 MT1HL1P0DM35 61 aa3.4□□□□□ -1.86
SEMA3A-204ENST00000436949 C10orf95Q9H7T3 257 aa3.4□□□□□ -1.86
SEMA3A-204ENST00000436949 LPAP08519 4548 aa3.4□□□□□ -1.86
SEMA3A-204ENST00000436949 TPRXLQ17RH7 258 aa3.39□□□□□ -1.87
SEMA3A-204ENST00000436949 XP32Q5T750 250 aa3.38□□□□□ -1.87
SEMA3A-204ENST00000436949 S4R3F8 94 aa3.38□□□□□ -1.87
SEMA3A-204ENST00000436949 KRTAP12-2P59991 146 aa3.36□□□□□ -1.87
SEMA3A-204ENST00000436949 SPINT4Q6UDR6 99 aa3.33□□□□□ -1.88
SEMA3A-204ENST00000436949 LRP2P98164 4655 aa3.32□□□□□ -1.88
SEMA3A-204ENST00000436949 FAT4Q6V0I7 4981 aa3.32□□□□□ -1.88
SEMA3A-204ENST00000436949 KRTAP12-1P59990 96 aa3.3□□□□□ -1.88
SEMA3A-204ENST00000436949 KRTAP23-1A1A580 65 aa3.24□□□□□ -1.89
SEMA3A-204ENST00000436949 NDUFAF8A1L188 74 aa3.24□□□□□ -1.89
SEMA3A-204ENST00000436949 KRTAP15-1Q3LI76 137 aa3.24□□□□□ -1.89
SEMA3A-204ENST00000436949 A0A0A0MQY5 61 aa3.23□□□□□ -1.89
SEMA3A-204ENST00000436949 M0QZ58 72 aa3.2□□□□□ -1.9
SEMA3A-204ENST00000436949 CRCT1Q9UGL9 99 aa3.19□□□□□ -1.9
SEMA3A-204ENST00000436949 MUC17Q685J3 4493 aa3.17□□□□□ -1.9
SEMA3A-204ENST00000436949 R4GN34 69 aa3.16□□□□□ -1.9
SEMA3A-204ENST00000436949 MUC2Q02817 5179 aa3.14□□□□□ -1.91
SEMA3A-204ENST00000436949 KRTAP4-1Q9BYQ7 146 aa3.11□□□□□ -1.91
SEMA3A-204ENST00000436949 KRTAP9-7A8MTY7 169 aa3.09□□□□□ -1.91
SEMA3A-204ENST00000436949 LOC100996750A0A140TA64 210 aa3.08□□□□□ -1.92
SEMA3A-204ENST00000436949 KRTAP4-6Q9BYQ5 205 aa3.08□□□□□ -1.92
SEMA3A-204ENST00000436949 PLAC4Q8WY50 150 aa3.06□□□□□ -1.92
SEMA3A-204ENST00000436949 SEC61BP60468 96 aaKnown RBP3.05□□□□□ -1.92
SEMA3A-204ENST00000436949 CAMK2N1Q7Z7J9 78 aa3.02□□□□□ -1.93
SEMA3A-204ENST00000436949 KRTAP19-2Q3LHN2 52 aa3.02□□□□□ -1.93
SEMA3A-204ENST00000436949 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.99□□□□□ -1.93
SEMA3A-204ENST00000436949 PP632Q6XCG6 107 aa2.92□□□□□ -1.94
SEMA3A-204ENST00000436949 MT1HP80294 61 aa2.91□□□□□ -1.94
SEMA3A-204ENST00000436949 LUZP6Q538Z0 58 aa2.91□□□□□ -1.94
SEMA3A-204ENST00000436949 KRTAP19-4Q3LI73 84 aa2.9□□□□□ -1.94
SEMA3A-204ENST00000436949 FLGP20930 4061 aaPredicted RBP2.89□□□□□ -1.95
SEMA3A-204ENST00000436949 TNP1P09430 55 aa2.88□□□□□ -1.95
SEMA3A-204ENST00000436949 SSPOA2VEC9 5147 aa2.87□□□□□ -1.95
SEMA3A-204ENST00000436949 FSIP2Q5CZC0 6907 aa2.82□□□□□ -1.96
SEMA3A-204ENST00000436949 KRTAP19-1Q8IUB9 90 aa2.8□□□□□ -1.96
SEMA3A-204ENST00000436949 SPRR5A0A1B0GTR4 108 aa2.79□□□□□ -1.96
SEMA3A-204ENST00000436949 LCE3AQ5TA76 89 aa2.78□□□□□ -1.96
SEMA3A-204ENST00000436949 M0R2T5 61 aa2.77□□□□□ -1.97
SEMA3A-204ENST00000436949 KRTAP6-3Q3LI67 103 aa2.77□□□□□ -1.97
SEMA3A-204ENST00000436949 SPRR2GQ9BYE4 73 aa2.77□□□□□ -1.97
SEMA3A-204ENST00000436949 FCGBPQ9Y6R7 5405 aaPredicted RBP2.75□□□□□ -1.97
SEMA3A-204ENST00000436949 USH2AO75445 5202 aa2.74□□□□□ -1.97
SEMA3A-204ENST00000436949 MT1FP04733 61 aa2.73□□□□□ -1.97
SEMA3A-204ENST00000436949 KRTAP20-1Q3LI63 56 aa2.73□□□□□ -1.97
SEMA3A-204ENST00000436949 KRTAP10-10P60014 251 aa2.72□□□□□ -1.97
SEMA3A-204ENST00000436949 KRTAP9-8Q9BYQ0 159 aa2.71□□□□□ -1.98
SEMA3A-204ENST00000436949 MT2AP02795 61 aa2.7□□□□□ -1.98
SEMA3A-204ENST00000436949 KRTAP19-6Q3LI70 58 aa2.7□□□□□ -1.98
SEMA3A-204ENST00000436949 KRTAP4-8Q9BYQ9 185 aa2.68□□□□□ -1.98
SEMA3A-204ENST00000436949 NEBP20929 6669 aa2.67□□□□□ -1.98
SEMA3A-204ENST00000436949 KRTAP10-5P60370 271 aa2.65□□□□□ -1.98
SEMA3A-204ENST00000436949 KRTAP9-3Q9BYQ3 159 aa2.65□□□□□ -1.99
SEMA3A-204ENST00000436949 MT1XP80297 61 aa2.64□□□□□ -1.99
SEMA3A-204ENST00000436949 MT1BP07438 61 aa2.64□□□□□ -1.99
SEMA3A-204ENST00000436949 KRTAP8-1Q8IUC2 63 aa2.64□□□□□ -1.99
SEMA3A-204ENST00000436949 MACF1Q9UPN3 7388 aaKnown RBP2.63□□□□□ -1.99
SEMA3A-204ENST00000436949 KRTAP10-7P60409 375 aaPredicted RBP2.61□□□□□ -1.99
SEMA3A-204ENST00000436949 KRTAP19-8Q3LI54 63 aa2.61□□□□□ -1.99
SEMA3A-204ENST00000436949 KRTAP12-3P60328 96 aa2.61□□□□□ -1.99
SEMA3A-204ENST00000436949 KRTAP10-12P60413 245 aa2.6□□□□□ -1.99
SEMA3A-204ENST00000436949 SYNE2Q8WXH0 6885 aaKnown RBP2.59□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms