RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 TYMSOSQ8TAI1 123 aa3.64□□□□□ -1.83
ECHDC1-208ENST00000436638 DMAC1Q96GE9 116 aa3.64□□□□□ -1.83
ECHDC1-208ENST00000436638 FAT1Q14517 4588 aa3.64□□□□□ -1.83
ECHDC1-208ENST00000436638 Q6ZQY7 126 aa3.63□□□□□ -1.83
ECHDC1-208ENST00000436638 H3BQ85 93 aa3.62□□□□□ -1.83
ECHDC1-208ENST00000436638 SPRR1BP22528 89 aa3.62□□□□□ -1.83
ECHDC1-208ENST00000436638 ZCCHC13Q8WW36 166 aaKnown RBP3.62□□□□□ -1.83
ECHDC1-208ENST00000436638 IGLV5-48A0A075B6I7 105 aa3.61□□□□□ -1.83
ECHDC1-208ENST00000436638 PDE6GP18545 87 aa3.61□□□□□ -1.83
ECHDC1-208ENST00000436638 SSBP3-AS1Q7Z2R9 100 aa3.61□□□□□ -1.83
ECHDC1-208ENST00000436638 ABCA13Q86UQ4 5058 aa3.6□□□□□ -1.83
ECHDC1-208ENST00000436638 MT3P25713 68 aa3.6□□□□□ -1.83
ECHDC1-208ENST00000436638 KRTAP10-8P60410 259 aa3.6□□□□□ -1.83
ECHDC1-208ENST00000436638 KRTAP25-1Q3LHN0 102 aa3.6□□□□□ -1.83
ECHDC1-208ENST00000436638 Q8N377 158 aa3.6□□□□□ -1.83
ECHDC1-208ENST00000436638 VPS13BQ7Z7G8 4022 aa3.6□□□□□ -1.83
ECHDC1-208ENST00000436638 NDUFAF8A1L188 74 aa3.59□□□□□ -1.83
ECHDC1-208ENST00000436638 H0Y9P7 68 aa3.59□□□□□ -1.83
ECHDC1-208ENST00000436638 KRTAP13-2Q52LG2 175 aa3.59□□□□□ -1.83
ECHDC1-208ENST00000436638 LINC00304Q8N9R0 145 aa3.59□□□□□ -1.83
ECHDC1-208ENST00000436638 IGLV7-46A0A075B6I9 117 aa3.58□□□□□ -1.84
ECHDC1-208ENST00000436638 MT1HL1P0DM35 61 aa3.58□□□□□ -1.84
ECHDC1-208ENST00000436638 PKHD1L1Q86WI1 4243 aa3.58□□□□□ -1.84
ECHDC1-208ENST00000436638 FLG2Q5D862 2391 aaPredicted RBP3.58□□□□□ -1.84
ECHDC1-208ENST00000436638 UQCR11O14957 56 aa3.56□□□□□ -1.84
ECHDC1-208ENST00000436638 KRTAP10-6P60371 365 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-208ENST00000436638 PCLOQ9Y6V0 5065 aa3.55□□□□□ -1.84
ECHDC1-208ENST00000436638 LOC110117498A0A087WWA1 95 aa3.55□□□□□ -1.84
ECHDC1-208ENST00000436638 SPINK1P00995 79 aa3.55□□□□□ -1.84
ECHDC1-208ENST00000436638 SPINK7P58062 85 aa3.55□□□□□ -1.84
ECHDC1-208ENST00000436638 KRTAP10-7P60409 375 aaPredicted RBP3.53□□□□□ -1.84
ECHDC1-208ENST00000436638 IGFL1Q6UW32 110 aa3.53□□□□□ -1.84
ECHDC1-208ENST00000436638 RPS29P62273 56 aaKnown RBP3.52□□□□□ -1.85
ECHDC1-208ENST00000436638 A0A0G2JQZ4 141 aa3.51□□□□□ -1.85
ECHDC1-208ENST00000436638 SPATA8Q6RVD6 105 aa3.51□□□□□ -1.85
ECHDC1-208ENST00000436638 FAT3Q8TDW7 4589 aa3.51□□□□□ -1.85
ECHDC1-208ENST00000436638 SRRM2Q9UQ35 2752 aaKnown RBP3.5□□□□□ -1.85
ECHDC1-208ENST00000436638 COA5Q86WW8 74 aa3.5□□□□□ -1.85
ECHDC1-208ENST00000436638 A0A1B0GU33 70 aa3.49□□□□□ -1.85
ECHDC1-208ENST00000436638 Q5W150 140 aa3.49□□□□□ -1.85
ECHDC1-208ENST00000436638 MYCBP2O75592 4640 aa3.48□□□□□ -1.85
ECHDC1-208ENST00000436638 LRP1Q07954 4544 aaKnown RBP3.48□□□□□ -1.85
ECHDC1-208ENST00000436638 DMBT1Q9UGM3 2413 aaPredicted RBP3.46□□□□□ -1.85
ECHDC1-208ENST00000436638 IGKV4-1P06312 121 aa3.46□□□□□ -1.86
ECHDC1-208ENST00000436638 SPINT4Q6UDR6 99 aa3.45□□□□□ -1.86
ECHDC1-208ENST00000436638 TNXBP22105 4242 aa3.44□□□□□ -1.86
ECHDC1-208ENST00000436638 DEFB116Q30KQ4 102 aa3.43□□□□□ -1.86
ECHDC1-208ENST00000436638 TPRXLQ17RH7 258 aa3.41□□□□□ -1.86
ECHDC1-208ENST00000436638 A0A1B0GU69 56 aa3.39□□□□□ -1.87
ECHDC1-208ENST00000436638 C9orf92A6NGG3 77 aa3.39□□□□□ -1.87
ECHDC1-208ENST00000436638 KRTAP13-3Q3SY46 172 aa3.38□□□□□ -1.87
ECHDC1-208ENST00000436638 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
ECHDC1-208ENST00000436638 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
ECHDC1-208ENST00000436638 Q96NJ1 140 aa3.38□□□□□ -1.87
ECHDC1-208ENST00000436638 LINC00472Q9H8W2 130 aa3.38□□□□□ -1.87
ECHDC1-208ENST00000436638 HERC1Q15751 4861 aa3.37□□□□□ -1.87
ECHDC1-208ENST00000436638 DSCR10P59022 87 aa3.35□□□□□ -1.87
ECHDC1-208ENST00000436638 HMCN2Q8NDA2 5059 aa3.34□□□□□ -1.87
ECHDC1-208ENST00000436638 PRO2289Q9P1D8 64 aa3.33□□□□□ -1.88
ECHDC1-208ENST00000436638 K7EQZ3 153 aa3.31□□□□□ -1.88
ECHDC1-208ENST00000436638 RPL37P61927 97 aaKnown RBP3.31□□□□□ -1.88
ECHDC1-208ENST00000436638 ACYP2P14621 99 aa3.29□□□□□ -1.88
ECHDC1-208ENST00000436638 PCOTHQ58A44 107 aa3.29□□□□□ -1.88
ECHDC1-208ENST00000436638 WFDC13Q8IUB5 93 aa3.28□□□□□ -1.88
ECHDC1-208ENST00000436638 Q8N9L7 120 aa3.28□□□□□ -1.88
ECHDC1-208ENST00000436638 MRPL34Q9BQ48 92 aaKnown RBP3.28□□□□□ -1.88
ECHDC1-208ENST00000436638 MMP24-AS1A0A0U1RRL7 71 aa3.27□□□□□ -1.89
ECHDC1-208ENST00000436638 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.27□□□□□ -1.89
ECHDC1-208ENST00000436638 R4GN34 69 aa3.26□□□□□ -1.89
ECHDC1-208ENST00000436638 LPAP08519 4548 aa3.25□□□□□ -1.89
ECHDC1-208ENST00000436638 HRES1P13985 223 aa3.24□□□□□ -1.89
ECHDC1-208ENST00000436638 LRP2P98164 4655 aa3.23□□□□□ -1.89
ECHDC1-208ENST00000436638 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
ECHDC1-208ENST00000436638 KRTAP10-5P60370 271 aa3.21□□□□□ -1.9
ECHDC1-208ENST00000436638 MUC17Q685J3 4493 aa3.2□□□□□ -1.9
ECHDC1-208ENST00000436638 KRTAP10-12P60413 245 aa3.2□□□□□ -1.9
ECHDC1-208ENST00000436638 TP53AIP1Q9HCN2 124 aa3.2□□□□□ -1.9
ECHDC1-208ENST00000436638 UBR4Q5T4S7 5183 aa3.19□□□□□ -1.9
ECHDC1-208ENST00000436638 KRTAP4-1Q9BYQ7 146 aa3.19□□□□□ -1.9
ECHDC1-208ENST00000436638 RNF213Q63HN8 5207 aa3.17□□□□□ -1.9
ECHDC1-208ENST00000436638 COX6B2Q6YFQ2 88 aa3.17□□□□□ -1.9
ECHDC1-208ENST00000436638 INE1O15225 51 aa3.12□□□□□ -1.91
ECHDC1-208ENST00000436638 M0R2T5 61 aa3.08□□□□□ -1.92
ECHDC1-208ENST00000436638 PLAC4Q8WY50 150 aa3.08□□□□□ -1.92
ECHDC1-208ENST00000436638 KRTAP19-2Q3LHN2 52 aa3.06□□□□□ -1.92
ECHDC1-208ENST00000436638 LCE3CQ5T5A8 94 aa3.06□□□□□ -1.92
ECHDC1-208ENST00000436638 MT1HP80294 61 aa3.05□□□□□ -1.92
ECHDC1-208ENST00000436638 H1FX-AS1Q4G0G2 97 aa3.05□□□□□ -1.92
ECHDC1-208ENST00000436638 CRIPTQ9P021 101 aa3.05□□□□□ -1.92
ECHDC1-208ENST00000436638 FAT4Q6V0I7 4981 aa3.05□□□□□ -1.92
ECHDC1-208ENST00000436638 KRTAP9-6A8MVA2 160 aa3.03□□□□□ -1.92
ECHDC1-208ENST00000436638 MUC2Q02817 5179 aa3.03□□□□□ -1.92
ECHDC1-208ENST00000436638 S4R3F8 94 aa2.99□□□□□ -1.93
ECHDC1-208ENST00000436638 H0YAA0 97 aa2.97□□□□□ -1.93
ECHDC1-208ENST00000436638 PP632Q6XCG6 107 aa2.92□□□□□ -1.94
ECHDC1-208ENST00000436638 KRTAP12-2P59991 146 aa2.9□□□□□ -1.95
ECHDC1-208ENST00000436638 KRTAP10-10P60014 251 aa2.9□□□□□ -1.95
ECHDC1-208ENST00000436638 FLGP20930 4061 aaPredicted RBP2.89□□□□□ -1.95
ECHDC1-208ENST00000436638 MT2AP02795 61 aa2.88□□□□□ -1.95
ECHDC1-208ENST00000436638 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms