RNA–Protein interactions for RNA: ENST00000436493.2

SDHAP3-201, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene SDHAP3, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP3-201ENST00000436493 KRTAP19-6Q3LI70 58 aa9.79□□□□□ -0.84
SDHAP3-201ENST00000436493 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.78□□□□□ -0.84
SDHAP3-201ENST00000436493 H3BPC8 53 aa9.78□□□□□ -0.84
SDHAP3-201ENST00000436493 NDUFC1O43677 76 aa9.78□□□□□ -0.84
SDHAP3-201ENST00000436493 K7ERU9 68 aa9.77□□□□□ -0.85
SDHAP3-201ENST00000436493 FCGBPQ9Y6R7 5405 aaPredicted RBP9.76□□□□□ -0.85
SDHAP3-201ENST00000436493 IMUPQ9GZP8 106 aa9.74□□□□□ -0.85
SDHAP3-201ENST00000436493 MT-ATP8P03928 68 aa9.68□□□□□ -0.86
SDHAP3-201ENST00000436493 SPRR2GQ9BYE4 73 aa9.67□□□□□ -0.86
SDHAP3-201ENST00000436493 Q5VV11 94 aa9.63□□□□□ -0.87
SDHAP3-201ENST00000436493 CRIPTQ9P021 101 aa9.63□□□□□ -0.87
SDHAP3-201ENST00000436493 KRTAP9-7A8MTY7 169 aa9.62□□□□□ -0.87
SDHAP3-201ENST00000436493 H0YAA0 97 aa9.61□□□□□ -0.87
SDHAP3-201ENST00000436493 SMIM20Q8N5G0 67 aa9.6□□□□□ -0.87
SDHAP3-201ENST00000436493 KRTAP19-8Q3LI54 63 aa9.59□□□□□ -0.87
SDHAP3-201ENST00000436493 TRAV7A0A075B6U4 112 aa9.56□□□□□ -0.88
SDHAP3-201ENST00000436493 MT1BP07438 61 aa9.56□□□□□ -0.88
SDHAP3-201ENST00000436493 DMAC1Q96GE9 116 aa9.56□□□□□ -0.88
SDHAP3-201ENST00000436493 ADM2Q7Z4H4 148 aa9.54□□□□□ -0.88
SDHAP3-201ENST00000436493 A6NN06 94 aa9.45□□□□□ -0.9
SDHAP3-201ENST00000436493 ACYP2P14621 99 aa9.41□□□□□ -0.9
SDHAP3-201ENST00000436493 MACF1Q9UPN3 7388 aaKnown RBP9.39□□□□□ -0.91
SDHAP3-201ENST00000436493 C20orf197Q8N268 126 aa9.37□□□□□ -0.91
SDHAP3-201ENST00000436493 SNURFQ9Y675 71 aa9.35□□□□□ -0.91
SDHAP3-201ENST00000436493 KRTAP10-5P60370 271 aa9.33□□□□□ -0.92
SDHAP3-201ENST00000436493 P0C880 135 aa9.31□□□□□ -0.92
SDHAP3-201ENST00000436493 SPTSSBQ8NFR3 76 aa9.3□□□□□ -0.92
SDHAP3-201ENST00000436493 R4GN34 69 aa9.3□□□□□ -0.92
SDHAP3-201ENST00000436493 SERP2Q8N6R1 65 aa9.29□□□□□ -0.92
SDHAP3-201ENST00000436493 CHKB-CPT1BH3BT56 60 aa9.25□□□□□ -0.93
SDHAP3-201ENST00000436493 SYNE2Q8WXH0 6885 aaKnown RBP9.25□□□□□ -0.93
SDHAP3-201ENST00000436493 KRTAP3-2Q9BYR7 98 aa9.23□□□□□ -0.93
SDHAP3-201ENST00000436493 M0QZ58 72 aa9.22□□□□□ -0.93
SDHAP3-201ENST00000436493 KRTAP6-3Q3LI67 103 aa9.22□□□□□ -0.93
SDHAP3-201ENST00000436493 SPANXA2-OT1Q8N9U9 137 aa9.2□□□□□ -0.94
SDHAP3-201ENST00000436493 PLAC4Q8WY50 150 aa9.19□□□□□ -0.94
SDHAP3-201ENST00000436493 LINC01554Q52M75 96 aa9.1□□□□□ -0.95
SDHAP3-201ENST00000436493 PRO2289Q9P1D8 64 aa9.1□□□□□ -0.95
SDHAP3-201ENST00000436493 COX7CP15954 63 aa9.04□□□□□ -0.96
SDHAP3-201ENST00000436493 MT1XP80297 61 aa9□□□□□ -0.97
SDHAP3-201ENST00000436493 COA5Q86WW8 74 aa8.94□□□□□ -0.98
SDHAP3-201ENST00000436493 H7BZZ5 65 aa8.84□□□□□ -0.99
SDHAP3-201ENST00000436493 KRTAP5-9P26371 169 aa8.83□□□□□ -1
SDHAP3-201ENST00000436493 CYSTM1Q9H1C7 97 aa8.82□□□□□ -1
SDHAP3-201ENST00000436493 ANAPC13Q9BS18 74 aa8.81□□□□□ -1
SDHAP3-201ENST00000436493 SEC61GP60059 68 aa8.79□□□□□ -1
SDHAP3-201ENST00000436493 KRTAP12-2P59991 146 aa8.77□□□□□ -1.01
SDHAP3-201ENST00000436493 SERP1Q9Y6X1 66 aa8.77□□□□□ -1.01
SDHAP3-201ENST00000436493 KRTAP13-4Q3LI77 160 aa8.74□□□□□ -1.01
SDHAP3-201ENST00000436493 MUC12Q9UKN1 5478 aa8.7□□□□□ -1.02
SDHAP3-201ENST00000436493 NEBP20929 6669 aa8.7□□□□□ -1.02
SDHAP3-201ENST00000436493 KRTAP8-1Q8IUC2 63 aa8.68□□□□□ -1.02
SDHAP3-201ENST00000436493 SPRR2FQ96RM1 72 aa8.65□□□□□ -1.02
SDHAP3-201ENST00000436493 KMT2DO14686 5537 aa8.64□□□□□ -1.03
SDHAP3-201ENST00000436493 CCDC179H3BU77 68 aa8.6□□□□□ -1.03
SDHAP3-201ENST00000436493 KRTAP10-7P60409 375 aaPredicted RBP8.6□□□□□ -1.03
SDHAP3-201ENST00000436493 CAMK2N1Q7Z7J9 78 aa8.6□□□□□ -1.03
SDHAP3-201ENST00000436493 A0A1B0GU33 70 aa8.59□□□□□ -1.03
SDHAP3-201ENST00000436493 KRTAP4-8A0A0G2JLE6 195 aa8.56□□□□□ -1.04
SDHAP3-201ENST00000436493 KRTAP10-12P60413 245 aa8.56□□□□□ -1.04
SDHAP3-201ENST00000436493 KRTAP4-8Q9BYQ9 185 aa8.56□□□□□ -1.04
SDHAP3-201ENST00000436493 A0A0D9SG42 100 aa8.55□□□□□ -1.04
SDHAP3-201ENST00000436493 SPATA8Q6RVD6 105 aa8.54□□□□□ -1.04
SDHAP3-201ENST00000436493 A0A1B0GU69 56 aa8.51□□□□□ -1.05
SDHAP3-201ENST00000436493 SPRR2EP22531 72 aa8.49□□□□□ -1.05
SDHAP3-201ENST00000436493 SPRR2BP35325 72 aa8.49□□□□□ -1.05
SDHAP3-201ENST00000436493 SPRR2AP35326 72 aa8.49□□□□□ -1.05
SDHAP3-201ENST00000436493 ATP5EP56381 51 aaPredicted RBP8.49□□□□□ -1.05
SDHAP3-201ENST00000436493 MDN1Q9NU22 5596 aa8.48□□□□□ -1.05
SDHAP3-201ENST00000436493 KRTAP20-1Q3LI63 56 aa8.48□□□□□ -1.05
SDHAP3-201ENST00000436493 SPINT4Q6UDR6 99 aa8.43□□□□□ -1.06
SDHAP3-201ENST00000436493 SMIM26A0A096LP01 95 aa8.37□□□□□ -1.07
SDHAP3-201ENST00000436493 LCE1AQ5T7P2 110 aa8.36□□□□□ -1.07
SDHAP3-201ENST00000436493 KRTAP12-1P59990 96 aa8.34□□□□□ -1.07
SDHAP3-201ENST00000436493 PRR15LQ9BU68 103 aa8.33□□□□□ -1.08
SDHAP3-201ENST00000436493 KRTAP2-3P0C7H8 128 aa8.31□□□□□ -1.08
SDHAP3-201ENST00000436493 TMEM258P61165 79 aa8.31□□□□□ -1.08
SDHAP3-201ENST00000436493 KRTAP2-4Q9BYR9 128 aa8.31□□□□□ -1.08
SDHAP3-201ENST00000436493 A8MU10 97 aa8.24□□□□□ -1.09
SDHAP3-201ENST00000436493 LINC01558Q9Y6Z2 57 aa8.23□□□□□ -1.09
SDHAP3-201ENST00000436493 SPRR2DP22532 72 aa8.21□□□□□ -1.1
SDHAP3-201ENST00000436493 KRTAP2-2Q9BYT5 123 aa8.04□□□□□ -1.12
SDHAP3-201ENST00000436493 KRTAP2-1Q9BYU5 128 aa8.04□□□□□ -1.12
SDHAP3-201ENST00000436493 UQCR11O14957 56 aa8.03□□□□□ -1.12
SDHAP3-201ENST00000436493 KRTAP19-7Q3SYF9 63 aa8.03□□□□□ -1.12
SDHAP3-201ENST00000436493 MT1EP04732 61 aa7.97□□□□□ -1.13
SDHAP3-201ENST00000436493 TNP1P09430 55 aa7.96□□□□□ -1.14
SDHAP3-201ENST00000436493 LCE3BQ5TA77 95 aa7.96□□□□□ -1.14
SDHAP3-201ENST00000436493 C10orf95Q9H7T3 257 aa7.96□□□□□ -1.14
SDHAP3-201ENST00000436493 KRTAP19-5Q3LI72 72 aa7.91□□□□□ -1.14
SDHAP3-201ENST00000436493 KRTAP19-3Q7Z4W3 81 aa7.89□□□□□ -1.15
SDHAP3-201ENST00000436493 LCE5AQ5TCM9 118 aa7.87□□□□□ -1.15
SDHAP3-201ENST00000436493 V9GYY9 64 aa7.87□□□□□ -1.15
SDHAP3-201ENST00000436493 MIR22HGQ0VDD5 57 aa7.86□□□□□ -1.15
SDHAP3-201ENST00000436493 LCE3AQ5TA76 89 aa7.81□□□□□ -1.16
SDHAP3-201ENST00000436493 PSPHP1O15172 72 aa7.79□□□□□ -1.16
SDHAP3-201ENST00000436493 Q1T7F1 81 aa7.78□□□□□ -1.16
SDHAP3-201ENST00000436493 K7ERS5 55 aa7.74□□□□□ -1.17
SDHAP3-201ENST00000436493 MT1GP13640 62 aa7.73□□□□□ -1.17
SDHAP3-201ENST00000436493 PP632Q6XCG6 107 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms