RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 KRTAP3-1Q9BYR8 98 aa10.71□□□□□ -0.69
YBX1-203ENST00000436427 KRTAP19-2Q3LHN2 52 aa10.7□□□□□ -0.7
YBX1-203ENST00000436427 LINC01558Q9Y6Z2 57 aa10.66□□□□□ -0.7
YBX1-203ENST00000436427 PSPHP1O15172 72 aa10.64□□□□□ -0.71
YBX1-203ENST00000436427 H1FX-AS1Q4G0G2 97 aa10.64□□□□□ -0.71
YBX1-203ENST00000436427 PRR15LQ9BU68 103 aa10.63□□□□□ -0.71
YBX1-203ENST00000436427 SPTSSBQ8NFR3 76 aa10.62□□□□□ -0.71
YBX1-203ENST00000436427 LCE2CQ5TA81 110 aa10.61□□□□□ -0.71
YBX1-203ENST00000436427 FAT4Q6V0I7 4981 aa10.58□□□□□ -0.72
YBX1-203ENST00000436427 LCE2DQ5TA82 110 aaPredicted RBP10.57□□□□□ -0.72
YBX1-203ENST00000436427 Q5VV11 94 aa10.53□□□□□ -0.72
YBX1-203ENST00000436427 S4R3F8 94 aa10.51□□□□□ -0.73
YBX1-203ENST00000436427 FLGP20930 4061 aaPredicted RBP10.46□□□□□ -0.73
YBX1-203ENST00000436427 LCA10Q71F78 164 aa10.46□□□□□ -0.74
YBX1-203ENST00000436427 A0A1B0GU69 56 aa10.45□□□□□ -0.74
YBX1-203ENST00000436427 MT1HP80294 61 aa10.45□□□□□ -0.74
YBX1-203ENST00000436427 BRK1Q8WUW1 75 aa10.44□□□□□ -0.74
YBX1-203ENST00000436427 A6NED7 52 aa10.38□□□□□ -0.75
YBX1-203ENST00000436427 M0R2T5 61 aa10.38□□□□□ -0.75
YBX1-203ENST00000436427 SEC61GP60059 68 aa10.38□□□□□ -0.75
YBX1-203ENST00000436427 PRO0628Q9UI54 55 aa10.36□□□□□ -0.75
YBX1-203ENST00000436427 KRTAP3-3Q9BYR6 98 aa10.35□□□□□ -0.75
YBX1-203ENST00000436427 CSAG1Q6PB30 78 aa10.3□□□□□ -0.76
YBX1-203ENST00000436427 LCE2AQ5TA79 106 aaPredicted RBP10.26□□□□□ -0.77
YBX1-203ENST00000436427 CDC42SE1Q9NRR8 79 aa10.23□□□□□ -0.77
YBX1-203ENST00000436427 UQCR11O14957 56 aa10.18□□□□□ -0.78
YBX1-203ENST00000436427 KRTAP10-6P60371 365 aaPredicted RBP10.12□□□□□ -0.79
YBX1-203ENST00000436427 MIR22HGQ0VDD5 57 aa10.08□□□□□ -0.8
YBX1-203ENST00000436427 SVIPQ8NHG7 77 aa10.07□□□□□ -0.8
YBX1-203ENST00000436427 SPATA8Q6RVD6 105 aa10.06□□□□□ -0.8
YBX1-203ENST00000436427 LORP23490 312 aaPredicted RBP10.05□□□□□ -0.8
YBX1-203ENST00000436427 A0A1B0GU33 70 aa10.02□□□□□ -0.8
YBX1-203ENST00000436427 A8MU10 97 aa10.02□□□□□ -0.81
YBX1-203ENST00000436427 ADM2Q7Z4H4 148 aa10□□□□□ -0.81
YBX1-203ENST00000436427 H0YAA0 97 aa9.99□□□□□ -0.81
YBX1-203ENST00000436427 KRTAP9-8Q9BYQ0 159 aa9.99□□□□□ -0.81
YBX1-203ENST00000436427 MT2AP02795 61 aa9.95□□□□□ -0.82
YBX1-203ENST00000436427 KRTAP3-2Q9BYR7 98 aa9.95□□□□□ -0.82
YBX1-203ENST00000436427 MT1FP04733 61 aa9.89□□□□□ -0.83
YBX1-203ENST00000436427 KRTAP10-10P60014 251 aa9.89□□□□□ -0.83
YBX1-203ENST00000436427 PMAIP1Q13794 54 aa9.88□□□□□ -0.83
YBX1-203ENST00000436427 P0C880 135 aa9.87□□□□□ -0.83
YBX1-203ENST00000436427 A6NN06 94 aa9.74□□□□□ -0.85
YBX1-203ENST00000436427 CRIPTQ9P021 101 aa9.71□□□□□ -0.86
YBX1-203ENST00000436427 K7ERS5 55 aa9.69□□□□□ -0.86
YBX1-203ENST00000436427 R4GN34 69 aa9.68□□□□□ -0.86
YBX1-203ENST00000436427 M0QZ58 72 aa9.65□□□□□ -0.86
YBX1-203ENST00000436427 KRTAP9-3Q9BYQ3 159 aa9.65□□□□□ -0.86
YBX1-203ENST00000436427 KRTAP13-4Q3LI77 160 aa9.61□□□□□ -0.87
YBX1-203ENST00000436427 KRTAP19-1Q8IUB9 90 aa9.57□□□□□ -0.88
YBX1-203ENST00000436427 KTN1-AS1Q86SY8 53 aa9.56□□□□□ -0.88
YBX1-203ENST00000436427 SPRR2GQ9BYE4 73 aa9.56□□□□□ -0.88
YBX1-203ENST00000436427 A0A0D9SG42 100 aa9.55□□□□□ -0.88
YBX1-203ENST00000436427 LINC01554Q52M75 96 aa9.5□□□□□ -0.89
YBX1-203ENST00000436427 LCE2BO14633 110 aa9.44□□□□□ -0.9
YBX1-203ENST00000436427 KRTAP19-8Q3LI54 63 aa9.36□□□□□ -0.91
YBX1-203ENST00000436427 KRTAP9-2Q9BYQ4 174 aa9.36□□□□□ -0.91
YBX1-203ENST00000436427 SPINT4Q6UDR6 99 aa9.34□□□□□ -0.91
YBX1-203ENST00000436427 KRTAP12-1P59990 96 aa9.31□□□□□ -0.92
YBX1-203ENST00000436427 KRTAP12-2P59991 146 aa9.29□□□□□ -0.92
YBX1-203ENST00000436427 MT1BP07438 61 aa9.27□□□□□ -0.93
YBX1-203ENST00000436427 USH2AO75445 5202 aa9.27□□□□□ -0.93
YBX1-203ENST00000436427 ROMO1P60602 79 aa9.23□□□□□ -0.93
YBX1-203ENST00000436427 PLAC4Q8WY50 150 aa9.23□□□□□ -0.93
YBX1-203ENST00000436427 PRAC1Q96KF2 57 aa9.15□□□□□ -0.94
YBX1-203ENST00000436427 FSIP2Q5CZC0 6907 aa9.1□□□□□ -0.95
YBX1-203ENST00000436427 KRTAP9-6A0A140TA67 174 aa9.05□□□□□ -0.96
YBX1-203ENST00000436427 CAMK2N1Q7Z7J9 78 aa9.04□□□□□ -0.96
YBX1-203ENST00000436427 SSPOA2VEC9 5147 aa9.04□□□□□ -0.96
YBX1-203ENST00000436427 KRTAP25-1Q3LHN0 102 aa8.95□□□□□ -0.98
YBX1-203ENST00000436427 KRTAP19-6Q3LI70 58 aa8.94□□□□□ -0.98
YBX1-203ENST00000436427 CRCT1Q9UGL9 99 aa8.9□□□□□ -0.98
YBX1-203ENST00000436427 MT1XP80297 61 aa8.9□□□□□ -0.99
YBX1-203ENST00000436427 PRO2289Q9P1D8 64 aa8.89□□□□□ -0.99
YBX1-203ENST00000436427 KRTAP10-5P60370 271 aa8.88□□□□□ -0.99
YBX1-203ENST00000436427 C10orf95Q9H7T3 257 aa8.78□□□□□ -1
YBX1-203ENST00000436427 FCGBPQ9Y6R7 5405 aaPredicted RBP8.7□□□□□ -1.02
YBX1-203ENST00000436427 TNP1P09430 55 aa8.57□□□□□ -1.04
YBX1-203ENST00000436427 KRTAP10-7P60409 375 aaPredicted RBP8.54□□□□□ -1.04
YBX1-203ENST00000436427 PP632Q6XCG6 107 aa8.51□□□□□ -1.05
YBX1-203ENST00000436427 KRTAP10-12P60413 245 aa8.44□□□□□ -1.06
YBX1-203ENST00000436427 KRTAP23-1A1A580 65 aa8.39□□□□□ -1.07
YBX1-203ENST00000436427 KMT2DO14686 5537 aa8.32□□□□□ -1.08
YBX1-203ENST00000436427 MACF1Q9UPN3 7388 aaKnown RBP8.31□□□□□ -1.08
YBX1-203ENST00000436427 KRTAP4-8A0A0G2JLE6 195 aa8.29□□□□□ -1.08
YBX1-203ENST00000436427 KRTAP4-8Q9BYQ9 185 aa8.29□□□□□ -1.08
YBX1-203ENST00000436427 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.25□□□□□ -1.09
YBX1-203ENST00000436427 LCE3AQ5TA76 89 aa8.22□□□□□ -1.09
YBX1-203ENST00000436427 KRTAP8-1Q8IUC2 63 aa8.18□□□□□ -1.1
YBX1-203ENST00000436427 KRTAP9-7A8MTY7 169 aa8.13□□□□□ -1.11
YBX1-203ENST00000436427 SYNE2Q8WXH0 6885 aaKnown RBP8.1□□□□□ -1.11
YBX1-203ENST00000436427 KRTAP19-5Q3LI72 72 aa7.98□□□□□ -1.13
YBX1-203ENST00000436427 SPRR2FQ96RM1 72 aa7.96□□□□□ -1.14
YBX1-203ENST00000436427 KRTAP6-3Q3LI67 103 aa7.95□□□□□ -1.14
YBX1-203ENST00000436427 KRTAP15-1Q3LI76 137 aa7.93□□□□□ -1.14
YBX1-203ENST00000436427 KRTAP19-7Q3SYF9 63 aa7.93□□□□□ -1.14
YBX1-203ENST00000436427 KRTAP5-9P26371 169 aa7.92□□□□□ -1.14
YBX1-203ENST00000436427 KRTAP12-3P60328 96 aa7.89□□□□□ -1.15
YBX1-203ENST00000436427 MT1EP04732 61 aa7.83□□□□□ -1.16
YBX1-203ENST00000436427 MUC12Q9UKN1 5478 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms