RNA–Protein interactions for RNA: ENST00000435495.6

PTPN12-206, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2 BASIC

Gene PTPN12, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-206ENST00000435495 KRTAP5-1Q6L8H4 278 aa1.73□□□□□ -2.13
PTPN12-206ENST00000435495 CRCT1Q9UGL9 99 aa1.73□□□□□ -2.13
PTPN12-206ENST00000435495 WNK1Q9H4A3 2382 aa1.72□□□□□ -2.13
PTPN12-206ENST00000435495 NBEAL2Q6ZNJ1 2754 aa1.71□□□□□ -2.14
PTPN12-206ENST00000435495 DNAH3Q8TD57 4116 aa1.71□□□□□ -2.14
PTPN12-206ENST00000435495 DEFB105AQ8NG35 78 aa1.71□□□□□ -2.14
PTPN12-206ENST00000435495 RPL39LQ96EH5 51 aaKnown RBP1.71□□□□□ -2.14
PTPN12-206ENST00000435495 DNAH9Q9NYC9 4486 aa1.7□□□□□ -2.14
PTPN12-206ENST00000435495 KRTAP12-4P60329 112 aa1.7□□□□□ -2.14
PTPN12-206ENST00000435495 IGLV5-48A0A075B6I7 105 aa1.7□□□□□ -2.14
PTPN12-206ENST00000435495 H3BSH0 61 aa1.7□□□□□ -2.14
PTPN12-206ENST00000435495 H3BUX3 64 aa1.7□□□□□ -2.14
PTPN12-206ENST00000435495 KLK9Q2XQG4 91 aa1.7□□□□□ -2.14
PTPN12-206ENST00000435495 SPRR1BP22528 89 aa1.69□□□□□ -2.14
PTPN12-206ENST00000435495 LINC01590Q5TEZ4 76 aa1.69□□□□□ -2.14
PTPN12-206ENST00000435495 KRTAP13-1Q8IUC0 172 aa1.69□□□□□ -2.14
PTPN12-206ENST00000435495 RYR2Q92736 4967 aa1.68□□□□□ -2.14
PTPN12-206ENST00000435495 TENM3Q9P273 2699 aa1.68□□□□□ -2.14
PTPN12-206ENST00000435495 KRTAP5-2Q701N4 177 aa1.68□□□□□ -2.14
PTPN12-206ENST00000435495 SACSQ9NZJ4 4579 aa1.68□□□□□ -2.14
PTPN12-206ENST00000435495 COL7A1Q02388 2944 aa1.68□□□□□ -2.14
PTPN12-206ENST00000435495 BIRC6Q9NR09 4857 aa1.68□□□□□ -2.14
PTPN12-206ENST00000435495 DYNC2H1Q8NCM8 4307 aaKnown RBP1.67□□□□□ -2.14
PTPN12-206ENST00000435495 EPPK1P58107 5090 aaKnown RBP1.67□□□□□ -2.14
PTPN12-206ENST00000435495 Q5VSD8 79 aa1.67□□□□□ -2.14
PTPN12-206ENST00000435495 LEAP2Q969E1 77 aa1.67□□□□□ -2.14
PTPN12-206ENST00000435495 WT1-ASQ06250 92 aa1.67□□□□□ -2.14
PTPN12-206ENST00000435495 SPINK9Q5DT21 86 aa1.67□□□□□ -2.14
PTPN12-206ENST00000435495 KRTAP5-5Q701N2 237 aaPredicted RBP1.66□□□□□ -2.14
PTPN12-206ENST00000435495 DNAH1Q9P2D7 4330 aa1.66□□□□□ -2.14
PTPN12-206ENST00000435495 HUWE1Q7Z6Z7 4374 aaKnown RBP1.66□□□□□ -2.14
PTPN12-206ENST00000435495 KRTAP4-3Q9BYR4 195 aa1.66□□□□□ -2.14
PTPN12-206ENST00000435495 DNAH7Q8WXX0 4024 aa1.66□□□□□ -2.14
PTPN12-206ENST00000435495 A0A0D9SG42 100 aa1.65□□□□□ -2.15
PTPN12-206ENST00000435495 KRTAP12-3P60328 96 aa1.65□□□□□ -2.15
PTPN12-206ENST00000435495 HYDINQ4G0P3 5121 aa1.64□□□□□ -2.15
PTPN12-206ENST00000435495 AHNAKQ09666 5890 aaKnown RBP1.64□□□□□ -2.15
PTPN12-206ENST00000435495 LYSTQ99698 3801 aa1.64□□□□□ -2.15
PTPN12-206ENST00000435495 STAB2Q8WWQ8 2551 aa1.63□□□□□ -2.15
PTPN12-206ENST00000435495 MMP24-AS1A0A0U1RRL7 71 aa1.63□□□□□ -2.15
PTPN12-206ENST00000435495 LCE3AQ5TA76 89 aa1.63□□□□□ -2.15
PTPN12-206ENST00000435495 TENM2Q9NT68 2774 aa1.63□□□□□ -2.15
PTPN12-206ENST00000435495 PLECQ15149 4684 aaKnown RBP1.63□□□□□ -2.15
PTPN12-206ENST00000435495 STARD9Q9P2P6 4700 aa1.63□□□□□ -2.15
PTPN12-206ENST00000435495 DEFB136Q30KP8 78 aa1.63□□□□□ -2.15
PTPN12-206ENST00000435495 RYR1P21817 5038 aa1.62□□□□□ -2.15
PTPN12-206ENST00000435495 PRLHP81277 87 aa1.61□□□□□ -2.15
PTPN12-206ENST00000435495 CSMD3Q7Z407 3707 aa1.61□□□□□ -2.15
PTPN12-206ENST00000435495 HERC2O95714 4834 aa1.61□□□□□ -2.15
PTPN12-206ENST00000435495 H3BUA1 57 aa1.59□□□□□ -2.15
PTPN12-206ENST00000435495 DNAH10Q8IVF4 4471 aa1.59□□□□□ -2.16
PTPN12-206ENST00000435495 S4R3F8 94 aa1.59□□□□□ -2.16
PTPN12-206ENST00000435495 DEFB131AP59861 70 aa1.58□□□□□ -2.16
PTPN12-206ENST00000435495 FRAS1Q86XX4 4008 aa1.58□□□□□ -2.16
PTPN12-206ENST00000435495 NEBP20929 6669 aa1.58□□□□□ -2.16
PTPN12-206ENST00000435495 A8MTW9 85 aa1.58□□□□□ -2.16
PTPN12-206ENST00000435495 RPL39P5Q59GN2 51 aa1.57□□□□□ -2.16
PTPN12-206ENST00000435495 KMT2AQ03164 3969 aa1.57□□□□□ -2.16
PTPN12-206ENST00000435495 HECTD4Q9Y4D8 3996 aa1.57□□□□□ -2.16
PTPN12-206ENST00000435495 VPS13DQ5THJ4 4388 aa1.57□□□□□ -2.16
PTPN12-206ENST00000435495 KRTAP20-1Q3LI63 56 aa1.57□□□□□ -2.16
PTPN12-206ENST00000435495 DNAH6Q9C0G6 4158 aa1.56□□□□□ -2.16
PTPN12-206ENST00000435495 APELAP0DMC3 54 aa1.56□□□□□ -2.16
PTPN12-206ENST00000435495 DYNC1H1Q14204 4646 aaKnown RBP1.55□□□□□ -2.16
PTPN12-206ENST00000435495 OBSCNQ5VST9 7968 aa1.55□□□□□ -2.16
PTPN12-206ENST00000435495 DEFB104AQ8WTQ1 72 aa1.55□□□□□ -2.16
PTPN12-206ENST00000435495 ABCA13Q86UQ4 5058 aa1.55□□□□□ -2.16
PTPN12-206ENST00000435495 M0QY20 66 aa1.55□□□□□ -2.16
PTPN12-206ENST00000435495 DEFB135Q30KP9 77 aa1.55□□□□□ -2.16
PTPN12-206ENST00000435495 SRRM2Q9UQ35 2752 aaKnown RBP1.55□□□□□ -2.16
PTPN12-206ENST00000435495 FAT2Q9NYQ8 4349 aa1.54□□□□□ -2.16
PTPN12-206ENST00000435495 DNAH17Q9UFH2 4485 aa1.54□□□□□ -2.16
PTPN12-206ENST00000435495 DNAH2Q9P225 4427 aa1.54□□□□□ -2.16
PTPN12-206ENST00000435495 DNAH11Q96DT5 4516 aa1.54□□□□□ -2.16
PTPN12-206ENST00000435495 PKHD1P08F94 4074 aa1.54□□□□□ -2.16
PTPN12-206ENST00000435495 TMEM167AQ8TBQ9 72 aa1.54□□□□□ -2.16
PTPN12-206ENST00000435495 HERC1Q15751 4861 aa1.53□□□□□ -2.16
PTPN12-206ENST00000435495 KRTAP10-4P60372 401 aaPredicted RBP1.53□□□□□ -2.16
PTPN12-206ENST00000435495 CLPSL2Q6UWE3 100 aa1.53□□□□□ -2.16
PTPN12-206ENST00000435495 MACF1Q9UPN3 7388 aaKnown RBP1.53□□□□□ -2.16
PTPN12-206ENST00000435495 PRCDQ00LT1 54 aa1.52□□□□□ -2.17
PTPN12-206ENST00000435495 PKD1P98161 4303 aa1.52□□□□□ -2.17
PTPN12-206ENST00000435495 HSPG2P98160 4391 aa1.52□□□□□ -2.17
PTPN12-206ENST00000435495 DEFB4AO15263 64 aa1.51□□□□□ -2.17
PTPN12-206ENST00000435495 RHPN1-AS1Q9BWJ2 59 aa1.51□□□□□ -2.17
PTPN12-206ENST00000435495 SYNE2Q8WXH0 6885 aaKnown RBP1.51□□□□□ -2.17
PTPN12-206ENST00000435495 K7EIM0 57 aa1.51□□□□□ -2.17
PTPN12-206ENST00000435495 TOMM7Q9P0U1 55 aa1.5□□□□□ -2.17
PTPN12-206ENST00000435495 LRP1BQ9NZR2 4599 aa1.5□□□□□ -2.17
PTPN12-206ENST00000435495 SPINK1P00995 79 aa1.5□□□□□ -2.17
PTPN12-206ENST00000435495 SPART-AS1P0CW21 52 aa1.49□□□□□ -2.17
PTPN12-206ENST00000435495 APOBP04114 4563 aaKnown RBP1.49□□□□□ -2.17
PTPN12-206ENST00000435495 DNAH5Q8TE73 4624 aa1.49□□□□□ -2.17
PTPN12-206ENST00000435495 AHNAK2Q8IVF2 5795 aa1.48□□□□□ -2.17
PTPN12-206ENST00000435495 SSPOA2VEC9 5147 aa1.48□□□□□ -2.17
PTPN12-206ENST00000435495 HTN3P15516 51 aa1.48□□□□□ -2.17
PTPN12-206ENST00000435495 FAT1Q14517 4588 aa1.46□□□□□ -2.18
PTPN12-206ENST00000435495 DEFB1P60022 68 aa1.45□□□□□ -2.18
PTPN12-206ENST00000435495 VPS13BQ7Z7G8 4022 aa1.45□□□□□ -2.18
PTPN12-206ENST00000435495 MYCBP2O75592 4640 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms