RNA–Protein interactions for RNA: ENST00000434453.1

LMBR1-209, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 2,229 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-209ENST00000434453 A0A1B0GU33 70 aa12.93□□□□□ -0.34
LMBR1-209ENST00000434453 MYCBP2O75592 4640 aa12.93□□□□□ -0.34
LMBR1-209ENST00000434453 RYR1P21817 5038 aa12.92□□□□□ -0.34
LMBR1-209ENST00000434453 H1FX-AS1Q4G0G2 97 aa12.9□□□□□ -0.34
LMBR1-209ENST00000434453 RPL37P61927 97 aaKnown RBP12.89□□□□□ -0.35
LMBR1-209ENST00000434453 XP32Q5T750 250 aa12.85□□□□□ -0.35
LMBR1-209ENST00000434453 KRTAP3-3Q9BYR6 98 aa12.79□□□□□ -0.36
LMBR1-209ENST00000434453 KIAA1109Q2LD37 5005 aa12.75□□□□□ -0.37
LMBR1-209ENST00000434453 MT1HL1P0DM35 61 aa12.73□□□□□ -0.37
LMBR1-209ENST00000434453 EPPK1P58107 5090 aaKnown RBP12.72□□□□□ -0.37
LMBR1-209ENST00000434453 CSAG1Q6PB30 78 aa12.67□□□□□ -0.38
LMBR1-209ENST00000434453 KRTAP10-6P60371 365 aaPredicted RBP12.66□□□□□ -0.38
LMBR1-209ENST00000434453 KRTAP3-2Q9BYR7 98 aa12.58□□□□□ -0.39
LMBR1-209ENST00000434453 S4R3F8 94 aa12.58□□□□□ -0.4
LMBR1-209ENST00000434453 LINC01554Q52M75 96 aa12.56□□□□□ -0.4
LMBR1-209ENST00000434453 LPAP08519 4548 aa12.55□□□□□ -0.4
LMBR1-209ENST00000434453 KRTAP13-4Q3LI77 160 aa12.53□□□□□ -0.4
LMBR1-209ENST00000434453 LRP2P98164 4655 aa12.5□□□□□ -0.41
LMBR1-209ENST00000434453 P0C880 135 aa12.41□□□□□ -0.42
LMBR1-209ENST00000434453 K7ERS5 55 aa12.39□□□□□ -0.43
LMBR1-209ENST00000434453 TPRXLQ17RH7 258 aa12.37□□□□□ -0.43
LMBR1-209ENST00000434453 KRTAP25-1Q3LHN0 102 aa12.34□□□□□ -0.43
LMBR1-209ENST00000434453 A0A0D9SG42 100 aa12.33□□□□□ -0.44
LMBR1-209ENST00000434453 ABCA13Q86UQ4 5058 aa12.29□□□□□ -0.44
LMBR1-209ENST00000434453 KRTAP4-5Q9BYR2 181 aa12.25□□□□□ -0.45
LMBR1-209ENST00000434453 CRIPTQ9P021 101 aa12.21□□□□□ -0.45
LMBR1-209ENST00000434453 ROMO1P60602 79 aa12.19□□□□□ -0.46
LMBR1-209ENST00000434453 BIRC6Q9NR09 4857 aa12.18□□□□□ -0.46
LMBR1-209ENST00000434453 KRTAP12-2P59991 146 aa12.09□□□□□ -0.47
LMBR1-209ENST00000434453 KRTAP12-1P59990 96 aa12.01□□□□□ -0.49
LMBR1-209ENST00000434453 HERC2O95714 4834 aa12□□□□□ -0.49
LMBR1-209ENST00000434453 MUC17Q685J3 4493 aa11.98□□□□□ -0.49
LMBR1-209ENST00000434453 M0QZ58 72 aa11.93□□□□□ -0.5
LMBR1-209ENST00000434453 SPINT4Q6UDR6 99 aa11.89□□□□□ -0.51
LMBR1-209ENST00000434453 KRTAP4-1Q9BYQ7 146 aa11.86□□□□□ -0.51
LMBR1-209ENST00000434453 SEC61BP60468 96 aaKnown RBP11.84□□□□□ -0.51
LMBR1-209ENST00000434453 C10orf95Q9H7T3 257 aa11.82□□□□□ -0.52
LMBR1-209ENST00000434453 J3QL48 77 aa11.75□□□□□ -0.53
LMBR1-209ENST00000434453 KRTAP19-2Q3LHN2 52 aa11.68□□□□□ -0.54
LMBR1-209ENST00000434453 LORP23490 312 aaPredicted RBP11.66□□□□□ -0.54
LMBR1-209ENST00000434453 R4GN34 69 aa11.64□□□□□ -0.55
LMBR1-209ENST00000434453 PCLOQ9Y6V0 5065 aa11.63□□□□□ -0.55
LMBR1-209ENST00000434453 MUC2Q02817 5179 aa11.45□□□□□ -0.58
LMBR1-209ENST00000434453 LCE2DQ5TA82 110 aaPredicted RBP11.41□□□□□ -0.58
LMBR1-209ENST00000434453 HERC1Q15751 4861 aa11.37□□□□□ -0.59
LMBR1-209ENST00000434453 FLGP20930 4061 aaPredicted RBP11.35□□□□□ -0.59
LMBR1-209ENST00000434453 H3BS24 57 aa11.28□□□□□ -0.6
LMBR1-209ENST00000434453 KRTAP15-1Q3LI76 137 aa11.28□□□□□ -0.6
LMBR1-209ENST00000434453 HMCN2Q8NDA2 5059 aa11.12□□□□□ -0.63
LMBR1-209ENST00000434453 CAMK2N1Q7Z7J9 78 aa11.02□□□□□ -0.65
LMBR1-209ENST00000434453 LCE2CQ5TA81 110 aa10.97□□□□□ -0.65
LMBR1-209ENST00000434453 FAT4Q6V0I7 4981 aa10.93□□□□□ -0.66
LMBR1-209ENST00000434453 NDUFAF8A1L188 74 aa10.89□□□□□ -0.67
LMBR1-209ENST00000434453 PP632Q6XCG6 107 aa10.8□□□□□ -0.68
LMBR1-209ENST00000434453 PLAC4Q8WY50 150 aa10.79□□□□□ -0.68
LMBR1-209ENST00000434453 UBR4Q5T4S7 5183 aa10.71□□□□□ -0.7
LMBR1-209ENST00000434453 SPRR2GQ9BYE4 73 aa10.69□□□□□ -0.7
LMBR1-209ENST00000434453 KRTAP19-1Q8IUB9 90 aa10.66□□□□□ -0.7
LMBR1-209ENST00000434453 RNF213Q63HN8 5207 aa10.64□□□□□ -0.71
LMBR1-209ENST00000434453 MT1HP80294 61 aa10.63□□□□□ -0.71
LMBR1-209ENST00000434453 TNP1P09430 55 aa10.62□□□□□ -0.71
LMBR1-209ENST00000434453 M0R2T5 61 aa10.55□□□□□ -0.72
LMBR1-209ENST00000434453 KRTAP23-1A1A580 65 aa10.5□□□□□ -0.73
LMBR1-209ENST00000434453 MT1FP04733 61 aa10.47□□□□□ -0.73
LMBR1-209ENST00000434453 MT2AP02795 61 aa10.45□□□□□ -0.74
LMBR1-209ENST00000434453 KRTAP9-8Q9BYQ0 159 aa10.41□□□□□ -0.74
LMBR1-209ENST00000434453 KRTAP10-10P60014 251 aa10.38□□□□□ -0.75
LMBR1-209ENST00000434453 KRTAP19-8Q3LI54 63 aa10.22□□□□□ -0.77
LMBR1-209ENST00000434453 LUZP6Q538Z0 58 aa10.18□□□□□ -0.78
LMBR1-209ENST00000434453 SPRR5A0A1B0GTR4 108 aa10.15□□□□□ -0.78
LMBR1-209ENST00000434453 LCE3AQ5TA76 89 aa10.15□□□□□ -0.78
LMBR1-209ENST00000434453 MT1BP07438 61 aa10.13□□□□□ -0.79
LMBR1-209ENST00000434453 KRTAP10-5P60370 271 aa10.04□□□□□ -0.8
LMBR1-209ENST00000434453 MT1XP80297 61 aa10.03□□□□□ -0.8
LMBR1-209ENST00000434453 KRTAP9-3Q9BYQ3 159 aa9.97□□□□□ -0.81
LMBR1-209ENST00000434453 KRTAP8-1Q8IUC2 63 aa9.9□□□□□ -0.82
LMBR1-209ENST00000434453 LCE2BO14633 110 aa9.75□□□□□ -0.85
LMBR1-209ENST00000434453 KRTAP10-12P60413 245 aa9.75□□□□□ -0.85
LMBR1-209ENST00000434453 KRTAP10-7P60409 375 aaPredicted RBP9.74□□□□□ -0.85
LMBR1-209ENST00000434453 LCE2AQ5TA79 106 aaPredicted RBP9.67□□□□□ -0.86
LMBR1-209ENST00000434453 KRTAP12-3P60328 96 aa9.64□□□□□ -0.87
LMBR1-209ENST00000434453 A0A0A0MQY5 61 aa9.58□□□□□ -0.88
LMBR1-209ENST00000434453 PRO2289Q9P1D8 64 aa9.54□□□□□ -0.88
LMBR1-209ENST00000434453 USH2AO75445 5202 aa9.44□□□□□ -0.9
LMBR1-209ENST00000434453 KRTAP19-5Q3LI72 72 aa9.29□□□□□ -0.92
LMBR1-209ENST00000434453 KMT2DO14686 5537 aa9.27□□□□□ -0.93
LMBR1-209ENST00000434453 KRTAP4-8A0A0G2JLE6 195 aa9.16□□□□□ -0.94
LMBR1-209ENST00000434453 KRTAP4-8Q9BYQ9 185 aa9.16□□□□□ -0.94
LMBR1-209ENST00000434453 LCE3CQ5T5A8 94 aa9.09□□□□□ -0.95
LMBR1-209ENST00000434453 KRTAP19-7Q3SYF9 63 aa8.95□□□□□ -0.98
LMBR1-209ENST00000434453 SSPOA2VEC9 5147 aa8.84□□□□□ -0.99
LMBR1-209ENST00000434453 KRTAP9-6A8MVA2 160 aa8.84□□□□□ -0.99
LMBR1-209ENST00000434453 FSIP2Q5CZC0 6907 aa8.81□□□□□ -1
LMBR1-209ENST00000434453 INE1O15225 51 aa8.74□□□□□ -1.01
LMBR1-209ENST00000434453 KRTAP4-7Q9BYR0 210 aa8.74□□□□□ -1.01
LMBR1-209ENST00000434453 MT1EP04732 61 aa8.67□□□□□ -1.02
LMBR1-209ENST00000434453 MT1LQ93083 61 aa8.66□□□□□ -1.02
LMBR1-209ENST00000434453 KRTAP19-6Q3LI70 58 aa8.65□□□□□ -1.02
LMBR1-209ENST00000434453 KRTAP9-2Q9BYQ4 174 aa8.58□□□□□ -1.04
LMBR1-209ENST00000434453 KRTAP19-4Q3LI73 84 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms