RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 MT1HP80294 61 aa12.95□□□□□ -0.34
TMEM248-205ENST00000433271 LCA10Q71F78 164 aa12.92□□□□□ -0.34
TMEM248-205ENST00000433271 COA5Q86WW8 74 aa12.86□□□□□ -0.35
TMEM248-205ENST00000433271 KRTAP3-3Q9BYR6 98 aa12.84□□□□□ -0.35
TMEM248-205ENST00000433271 CHKB-CPT1BH3BT56 60 aa12.83□□□□□ -0.36
TMEM248-205ENST00000433271 M0R2T5 61 aa12.8□□□□□ -0.36
TMEM248-205ENST00000433271 CSAG1Q6PB30 78 aa12.77□□□□□ -0.37
TMEM248-205ENST00000433271 LCE2AQ5TA79 106 aaPredicted RBP12.75□□□□□ -0.37
TMEM248-205ENST00000433271 LCE2DQ5TA82 110 aaPredicted RBP12.7□□□□□ -0.38
TMEM248-205ENST00000433271 SPTSSBQ8NFR3 76 aa12.7□□□□□ -0.38
TMEM248-205ENST00000433271 SERP1Q9Y6X1 66 aa12.67□□□□□ -0.38
TMEM248-205ENST00000433271 KRTAP10-6P60371 365 aaPredicted RBP12.54□□□□□ -0.4
TMEM248-205ENST00000433271 LORP23490 312 aaPredicted RBP12.48□□□□□ -0.41
TMEM248-205ENST00000433271 RPS28P62857 69 aaKnown RBP12.47□□□□□ -0.41
TMEM248-205ENST00000433271 H0YAA0 97 aa12.44□□□□□ -0.42
TMEM248-205ENST00000433271 KRTAP9-8Q9BYQ0 159 aa12.42□□□□□ -0.42
TMEM248-205ENST00000433271 ADM2Q7Z4H4 148 aa12.35□□□□□ -0.43
TMEM248-205ENST00000433271 MT2AP02795 61 aa12.33□□□□□ -0.43
TMEM248-205ENST00000433271 KRTAP3-2Q9BYR7 98 aa12.29□□□□□ -0.44
TMEM248-205ENST00000433271 SMIM26A0A096LP01 95 aa12.28□□□□□ -0.44
TMEM248-205ENST00000433271 SEC61GP60059 68 aa12.25□□□□□ -0.45
TMEM248-205ENST00000433271 MT1FP04733 61 aa12.24□□□□□ -0.45
TMEM248-205ENST00000433271 KRTAP10-10P60014 251 aa12.22□□□□□ -0.45
TMEM248-205ENST00000433271 LINC01558Q9Y6Z2 57 aa12.22□□□□□ -0.45
TMEM248-205ENST00000433271 P0C880 135 aa12.21□□□□□ -0.46
TMEM248-205ENST00000433271 A0A1B0GU69 56 aa12.19□□□□□ -0.46
TMEM248-205ENST00000433271 Q1T7F1 81 aa12.15□□□□□ -0.46
TMEM248-205ENST00000433271 V9GYY9 64 aa12.15□□□□□ -0.46
TMEM248-205ENST00000433271 PRR15LQ9BU68 103 aa12.1□□□□□ -0.47
TMEM248-205ENST00000433271 CRIPTQ9P021 101 aa12.07□□□□□ -0.48
TMEM248-205ENST00000433271 KRTAP9-3Q9BYQ3 159 aa11.99□□□□□ -0.49
TMEM248-205ENST00000433271 A0A1B0GU33 70 aa11.96□□□□□ -0.5
TMEM248-205ENST00000433271 R4GN34 69 aa11.95□□□□□ -0.5
TMEM248-205ENST00000433271 PSPHP1O15172 72 aa11.93□□□□□ -0.5
TMEM248-205ENST00000433271 M0QZ58 72 aa11.9□□□□□ -0.5
TMEM248-205ENST00000433271 SPRR2GQ9BYE4 73 aa11.9□□□□□ -0.5
TMEM248-205ENST00000433271 KRTAP19-1Q8IUB9 90 aa11.89□□□□□ -0.51
TMEM248-205ENST00000433271 Q5VV11 94 aa11.83□□□□□ -0.52
TMEM248-205ENST00000433271 KRTAP13-4Q3LI77 160 aa11.82□□□□□ -0.52
TMEM248-205ENST00000433271 SPATA8Q6RVD6 105 aa11.75□□□□□ -0.53
TMEM248-205ENST00000433271 UQCR11O14957 56 aa11.74□□□□□ -0.53
TMEM248-205ENST00000433271 LCE2BO14633 110 aa11.71□□□□□ -0.54
TMEM248-205ENST00000433271 LINC01554Q52M75 96 aa11.68□□□□□ -0.54
TMEM248-205ENST00000433271 KRTAP19-8Q3LI54 63 aa11.64□□□□□ -0.55
TMEM248-205ENST00000433271 A6NED7 52 aa11.58□□□□□ -0.56
TMEM248-205ENST00000433271 MIR22HGQ0VDD5 57 aa11.57□□□□□ -0.56
TMEM248-205ENST00000433271 A0A0D9SG42 100 aa11.55□□□□□ -0.56
TMEM248-205ENST00000433271 A8MU10 97 aa11.52□□□□□ -0.57
TMEM248-205ENST00000433271 A6NN06 94 aa11.5□□□□□ -0.57
TMEM248-205ENST00000433271 MT1BP07438 61 aa11.5□□□□□ -0.57
TMEM248-205ENST00000433271 KRTAP9-2Q9BYQ4 174 aa11.5□□□□□ -0.57
TMEM248-205ENST00000433271 USH2AO75445 5202 aa11.46□□□□□ -0.58
TMEM248-205ENST00000433271 PLAC4Q8WY50 150 aa11.41□□□□□ -0.58
TMEM248-205ENST00000433271 KRTAP12-1P59990 96 aa11.35□□□□□ -0.59
TMEM248-205ENST00000433271 SPINT4Q6UDR6 99 aa11.32□□□□□ -0.6
TMEM248-205ENST00000433271 CDC42SE1Q9NRR8 79 aa11.32□□□□□ -0.6
TMEM248-205ENST00000433271 KRTAP12-2P59991 146 aa11.3□□□□□ -0.6
TMEM248-205ENST00000433271 FSIP2Q5CZC0 6907 aa11.26□□□□□ -0.61
TMEM248-205ENST00000433271 CAMK2N1Q7Z7J9 78 aa11.14□□□□□ -0.63
TMEM248-205ENST00000433271 SSPOA2VEC9 5147 aa11.14□□□□□ -0.63
TMEM248-205ENST00000433271 K7ERS5 55 aa11.13□□□□□ -0.63
TMEM248-205ENST00000433271 KRTAP19-6Q3LI70 58 aa11.12□□□□□ -0.63
TMEM248-205ENST00000433271 BRK1Q8WUW1 75 aa11.12□□□□□ -0.63
TMEM248-205ENST00000433271 CRCT1Q9UGL9 99 aa11.05□□□□□ -0.64
TMEM248-205ENST00000433271 MT1XP80297 61 aa11.04□□□□□ -0.64
TMEM248-205ENST00000433271 KRTAP10-5P60370 271 aa11.02□□□□□ -0.64
TMEM248-205ENST00000433271 PRO2289Q9P1D8 64 aa11.01□□□□□ -0.65
TMEM248-205ENST00000433271 C10orf95Q9H7T3 257 aa10.77□□□□□ -0.68
TMEM248-205ENST00000433271 FCGBPQ9Y6R7 5405 aaPredicted RBP10.77□□□□□ -0.69
TMEM248-205ENST00000433271 KRTAP9-6A0A140TA67 174 aa10.76□□□□□ -0.69
TMEM248-205ENST00000433271 PRO0628Q9UI54 55 aa10.67□□□□□ -0.7
TMEM248-205ENST00000433271 ROMO1P60602 79 aa10.58□□□□□ -0.72
TMEM248-205ENST00000433271 KRTAP10-7P60409 375 aaPredicted RBP10.56□□□□□ -0.72
TMEM248-205ENST00000433271 TNP1P09430 55 aa10.53□□□□□ -0.72
TMEM248-205ENST00000433271 PMAIP1Q13794 54 aa10.52□□□□□ -0.73
TMEM248-205ENST00000433271 KRTAP10-12P60413 245 aa10.49□□□□□ -0.73
TMEM248-205ENST00000433271 KRTAP25-1Q3LHN0 102 aa10.44□□□□□ -0.74
TMEM248-205ENST00000433271 KRTAP4-8A0A0G2JLE6 195 aa10.25□□□□□ -0.77
TMEM248-205ENST00000433271 KRTAP4-8Q9BYQ9 185 aa10.25□□□□□ -0.77
TMEM248-205ENST00000433271 MACF1Q9UPN3 7388 aaKnown RBP10.25□□□□□ -0.77
TMEM248-205ENST00000433271 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.23□□□□□ -0.77
TMEM248-205ENST00000433271 KMT2DO14686 5537 aa10.19□□□□□ -0.78
TMEM248-205ENST00000433271 LCE3AQ5TA76 89 aa10.14□□□□□ -0.79
TMEM248-205ENST00000433271 KRTAP23-1A1A580 65 aa10.11□□□□□ -0.79
TMEM248-205ENST00000433271 KRTAP8-1Q8IUC2 63 aa10.11□□□□□ -0.79
TMEM248-205ENST00000433271 SYNE2Q8WXH0 6885 aaKnown RBP10□□□□□ -0.81
TMEM248-205ENST00000433271 PP632Q6XCG6 107 aa10□□□□□ -0.81
TMEM248-205ENST00000433271 KTN1-AS1Q86SY8 53 aa9.93□□□□□ -0.82
TMEM248-205ENST00000433271 KRTAP6-3Q3LI67 103 aa9.89□□□□□ -0.83
TMEM248-205ENST00000433271 KRTAP5-9P26371 169 aa9.87□□□□□ -0.83
TMEM248-205ENST00000433271 KRTAP19-5Q3LI72 72 aa9.87□□□□□ -0.83
TMEM248-205ENST00000433271 PRAC1Q96KF2 57 aa9.86□□□□□ -0.83
TMEM248-205ENST00000433271 KRTAP19-7Q3SYF9 63 aa9.85□□□□□ -0.83
TMEM248-205ENST00000433271 SPRR2FQ96RM1 72 aa9.82□□□□□ -0.84
TMEM248-205ENST00000433271 KRTAP9-7A8MTY7 169 aa9.8□□□□□ -0.84
TMEM248-205ENST00000433271 KRTAP12-3P60328 96 aa9.77□□□□□ -0.85
TMEM248-205ENST00000433271 MT1EP04732 61 aa9.71□□□□□ -0.86
TMEM248-205ENST00000433271 MUC12Q9UKN1 5478 aa9.58□□□□□ -0.88
TMEM248-205ENST00000433271 KRTAP15-1Q3LI76 137 aa9.48□□□□□ -0.89
TMEM248-205ENST00000433271 LCE1AQ5T7P2 110 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms