RNA–Protein interactions for RNA: ENST00000432072.6

FN1-209, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,759 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-209ENST00000432072 FRAS1Q86XX4 4008 aa4.43□□□□□ -1.7
FN1-209ENST00000432072 VPS13BQ7Z7G8 4022 aa4.42□□□□□ -1.7
FN1-209ENST00000432072 DNAH7Q8WXX0 4024 aa4.41□□□□□ -1.7
FN1-209ENST00000432072 KRTAP8-1Q8IUC2 63 aa4.4□□□□□ -1.7
FN1-209ENST00000432072 KRTAP10-4P60372 401 aaPredicted RBP4.4□□□□□ -1.71
FN1-209ENST00000432072 DNAH3Q8TD57 4116 aa4.39□□□□□ -1.71
FN1-209ENST00000432072 ANK2Q01484 3957 aa4.37□□□□□ -1.71
FN1-209ENST00000432072 KRTAP10-6P60371 365 aaPredicted RBP4.36□□□□□ -1.71
FN1-209ENST00000432072 DNAH9Q9NYC9 4486 aa4.35□□□□□ -1.71
FN1-209ENST00000432072 PRKDCP78527 4128 aaKnown RBP4.35□□□□□ -1.71
FN1-209ENST00000432072 KRTAP12-3P60328 96 aa4.29□□□□□ -1.72
FN1-209ENST00000432072 DNAH2Q9P225 4427 aa4.28□□□□□ -1.72
FN1-209ENST00000432072 KRTAP3-3Q9BYR6 98 aa4.26□□□□□ -1.73
FN1-209ENST00000432072 FAT2Q9NYQ8 4349 aa4.24□□□□□ -1.73
FN1-209ENST00000432072 DNAH6Q9C0G6 4158 aa4.21□□□□□ -1.74
FN1-209ENST00000432072 LCE3AQ5TA76 89 aa4.2□□□□□ -1.74
FN1-209ENST00000432072 KRTAP3-2Q9BYR7 98 aa4.18□□□□□ -1.74
FN1-209ENST00000432072 HECTD4Q9Y4D8 3996 aa4.17□□□□□ -1.74
FN1-209ENST00000432072 MT1HP80294 61 aa4.17□□□□□ -1.74
FN1-209ENST00000432072 SPRR2FQ96RM1 72 aa4.13□□□□□ -1.75
FN1-209ENST00000432072 KRTAP23-1A1A580 65 aa4.09□□□□□ -1.75
FN1-209ENST00000432072 KRTAP10-5P60370 271 aa4.09□□□□□ -1.75
FN1-209ENST00000432072 KRTAP10-7P60409 375 aaPredicted RBP4.09□□□□□ -1.75
FN1-209ENST00000432072 INE1O15225 51 aa4.08□□□□□ -1.76
FN1-209ENST00000432072 DYNC2H1Q8NCM8 4307 aaKnown RBP4.07□□□□□ -1.76
FN1-209ENST00000432072 DNAH10Q8IVF4 4471 aa4.05□□□□□ -1.76
FN1-209ENST00000432072 KRTAP4-1Q9BYQ7 146 aa4.04□□□□□ -1.76
FN1-209ENST00000432072 MT2AP02795 61 aa3.99□□□□□ -1.77
FN1-209ENST00000432072 SPRR2EP22531 72 aa3.99□□□□□ -1.77
FN1-209ENST00000432072 SPRR2BP35325 72 aa3.99□□□□□ -1.77
FN1-209ENST00000432072 SPRR2AP35326 72 aa3.99□□□□□ -1.77
FN1-209ENST00000432072 VPS13DQ5THJ4 4388 aa3.97□□□□□ -1.77
FN1-209ENST00000432072 STARD9Q9P2P6 4700 aa3.96□□□□□ -1.78
FN1-209ENST00000432072 SPRR2GQ9BYE4 73 aa3.94□□□□□ -1.78
FN1-209ENST00000432072 PLECQ15149 4684 aaKnown RBP3.93□□□□□ -1.78
FN1-209ENST00000432072 DNAH17Q9UFH2 4485 aa3.92□□□□□ -1.78
FN1-209ENST00000432072 PKHD1P08F94 4074 aa3.92□□□□□ -1.78
FN1-209ENST00000432072 DNAH11Q96DT5 4516 aa3.92□□□□□ -1.78
FN1-209ENST00000432072 MT1FP04733 61 aa3.9□□□□□ -1.78
FN1-209ENST00000432072 DNAH5Q8TE73 4624 aa3.87□□□□□ -1.79
FN1-209ENST00000432072 LRP1BQ9NZR2 4599 aa3.86□□□□□ -1.79
FN1-209ENST00000432072 SPRR2DP22532 72 aa3.86□□□□□ -1.79
FN1-209ENST00000432072 KRTAP17-1Q9BYP8 105 aa3.86□□□□□ -1.79
FN1-209ENST00000432072 KRTAP19-5Q3LI72 72 aa3.84□□□□□ -1.8
FN1-209ENST00000432072 LCE2BO14633 110 aa3.8□□□□□ -1.8
FN1-209ENST00000432072 PKHD1L1Q86WI1 4243 aa3.8□□□□□ -1.8
FN1-209ENST00000432072 FLGP20930 4061 aaPredicted RBP3.78□□□□□ -1.8
FN1-209ENST00000432072 DNAH8Q96JB1 4490 aa3.78□□□□□ -1.8
FN1-209ENST00000432072 LCE3CQ5T5A8 94 aa3.72□□□□□ -1.81
FN1-209ENST00000432072 KRTAP12-4P60329 112 aa3.7□□□□□ -1.82
FN1-209ENST00000432072 HSPG2P98160 4391 aa3.67□□□□□ -1.82
FN1-209ENST00000432072 KRTAP19-1Q8IUB9 90 aa3.67□□□□□ -1.82
FN1-209ENST00000432072 KRTAP19-4Q3LI73 84 aa3.66□□□□□ -1.82
FN1-209ENST00000432072 KRTAP9-2Q9BYQ4 174 aa3.65□□□□□ -1.83
FN1-209ENST00000432072 FAT1Q14517 4588 aa3.64□□□□□ -1.83
FN1-209ENST00000432072 FAT3Q8TDW7 4589 aa3.64□□□□□ -1.83
FN1-209ENST00000432072 PKD1P98161 4303 aa3.61□□□□□ -1.83
FN1-209ENST00000432072 LCE2CQ5TA81 110 aa3.6□□□□□ -1.83
FN1-209ENST00000432072 KRTAP19-8Q3LI54 63 aa3.59□□□□□ -1.83
FN1-209ENST00000432072 LCE3BQ5TA77 95 aa3.59□□□□□ -1.84
FN1-209ENST00000432072 DNHD1Q96M86 4753 aa3.59□□□□□ -1.84
FN1-209ENST00000432072 SACSQ9NZJ4 4579 aa3.58□□□□□ -1.84
FN1-209ENST00000432072 APOBP04114 4563 aaKnown RBP3.57□□□□□ -1.84
FN1-209ENST00000432072 TNXBP22105 4242 aa3.57□□□□□ -1.84
FN1-209ENST00000432072 DYNC1H1Q14204 4646 aaKnown RBP3.57□□□□□ -1.84
FN1-209ENST00000432072 SPRR5A0A1B0GTR4 108 aa3.55□□□□□ -1.84
FN1-209ENST00000432072 KRTAP9-8Q9BYQ0 159 aa3.55□□□□□ -1.84
FN1-209ENST00000432072 LCE2DQ5TA82 110 aaPredicted RBP3.54□□□□□ -1.84
FN1-209ENST00000432072 LPAP08519 4548 aa3.53□□□□□ -1.85
FN1-209ENST00000432072 KRTAP9-6A0A140TA67 174 aa3.52□□□□□ -1.85
FN1-209ENST00000432072 MT1GP13640 62 aa3.52□□□□□ -1.85
FN1-209ENST00000432072 MT1XP80297 61 aa3.5□□□□□ -1.85
FN1-209ENST00000432072 MT4P47944 62 aa3.48□□□□□ -1.85
FN1-209ENST00000432072 LRP1Q07954 4544 aaKnown RBP3.47□□□□□ -1.85
FN1-209ENST00000432072 KRTAP9-3Q9BYQ3 159 aa3.46□□□□□ -1.86
FN1-209ENST00000432072 KRTAP4-8A0A0G2JLE6 195 aa3.44□□□□□ -1.86
FN1-209ENST00000432072 KRTAP4-8Q9BYQ9 185 aa3.44□□□□□ -1.86
FN1-209ENST00000432072 MT1BP07438 61 aa3.44□□□□□ -1.86
FN1-209ENST00000432072 MYCBP2O75592 4640 aa3.39□□□□□ -1.87
FN1-209ENST00000432072 RYR1P21817 5038 aa3.37□□□□□ -1.87
FN1-209ENST00000432072 KRTAP20-1Q3LI63 56 aa3.36□□□□□ -1.87
FN1-209ENST00000432072 KRTAP19-3Q7Z4W3 81 aa3.35□□□□□ -1.87
FN1-209ENST00000432072 KRTAP9-7A8MTY7 169 aa3.31□□□□□ -1.88
FN1-209ENST00000432072 LCE3DQ9BYE3 92 aa3.28□□□□□ -1.88
FN1-209ENST00000432072 KRTAP19-6Q3LI70 58 aa3.25□□□□□ -1.89
FN1-209ENST00000432072 RYR3Q15413 4870 aa3.22□□□□□ -1.89
FN1-209ENST00000432072 MT1LQ93083 61 aa3.22□□□□□ -1.89
FN1-209ENST00000432072 LRP2P98164 4655 aa3.2□□□□□ -1.9
FN1-209ENST00000432072 MT1EP04732 61 aa3.2□□□□□ -1.9
FN1-209ENST00000432072 LCE3EQ5T5B0 92 aa3.17□□□□□ -1.9
FN1-209ENST00000432072 LCE1BQ5T7P3 118 aa3.17□□□□□ -1.9
FN1-209ENST00000432072 MT3P25713 68 aa3.16□□□□□ -1.9
FN1-209ENST00000432072 LCE1DQ5T752 114 aa3.16□□□□□ -1.9
FN1-209ENST00000432072 MT1MQ8N339 61 aa3.12□□□□□ -1.91
FN1-209ENST00000432072 KRTAP4-7Q9BYR0 210 aa3.11□□□□□ -1.91
FN1-209ENST00000432072 KRTAP19-2Q3LHN2 52 aa3.1□□□□□ -1.91
FN1-209ENST00000432072 KRTAP2-3P0C7H8 128 aa3.1□□□□□ -1.91
FN1-209ENST00000432072 KRTAP2-4Q9BYR9 128 aa3.1□□□□□ -1.91
FN1-209ENST00000432072 LCE2AQ5TA79 106 aaPredicted RBP3.08□□□□□ -1.92
FN1-209ENST00000432072 MUC17Q685J3 4493 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 281.7 ms