RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 CRCT1Q9UGL9 99 aa9.25□□□□□ -0.93
HMGN1-206ENST00000431390 KRTAP3-1Q9BYR8 98 aa9.23□□□□□ -0.93
HMGN1-206ENST00000431390 ACYP2P14621 99 aa9.21□□□□□ -0.93
HMGN1-206ENST00000431390 SERP1Q9Y6X1 66 aa9.12□□□□□ -0.95
HMGN1-206ENST00000431390 H1FX-AS1Q4G0G2 97 aa9.12□□□□□ -0.95
HMGN1-206ENST00000431390 COA5Q86WW8 74 aa9.12□□□□□ -0.95
HMGN1-206ENST00000431390 KRTAP19-2Q3LHN2 52 aa9.09□□□□□ -0.95
HMGN1-206ENST00000431390 LCE2CQ5TA81 110 aa9.06□□□□□ -0.96
HMGN1-206ENST00000431390 CHKB-CPT1BH3BT56 60 aa9.04□□□□□ -0.96
HMGN1-206ENST00000431390 RPS28P62857 69 aaKnown RBP9.03□□□□□ -0.96
HMGN1-206ENST00000431390 S4R3F8 94 aa9.01□□□□□ -0.97
HMGN1-206ENST00000431390 MT1HP80294 61 aa8.99□□□□□ -0.97
HMGN1-206ENST00000431390 LCA10Q71F78 164 aa8.96□□□□□ -0.97
HMGN1-206ENST00000431390 SPTSSBQ8NFR3 76 aa8.94□□□□□ -0.98
HMGN1-206ENST00000431390 LORP23490 312 aaPredicted RBP8.9□□□□□ -0.99
HMGN1-206ENST00000431390 KRTAP10-6P60371 365 aaPredicted RBP8.88□□□□□ -0.99
HMGN1-206ENST00000431390 SMIM26A0A096LP01 95 aa8.86□□□□□ -0.99
HMGN1-206ENST00000431390 FLGP20930 4061 aaPredicted RBP8.84□□□□□ -0.99
HMGN1-206ENST00000431390 CSAG1Q6PB30 78 aa8.83□□□□□ -1
HMGN1-206ENST00000431390 M0R2T5 61 aa8.78□□□□□ -1
HMGN1-206ENST00000431390 V9GYY9 64 aa8.73□□□□□ -1.01
HMGN1-206ENST00000431390 Q1T7F1 81 aa8.73□□□□□ -1.01
HMGN1-206ENST00000431390 LINC01558Q9Y6Z2 57 aa8.73□□□□□ -1.01
HMGN1-206ENST00000431390 KRTAP9-7A8MTY7 169 aa8.67□□□□□ -1.02
HMGN1-206ENST00000431390 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.65□□□□□ -1.02
HMGN1-206ENST00000431390 H0YAA0 97 aa8.65□□□□□ -1.02
HMGN1-206ENST00000431390 SEC61GP60059 68 aa8.64□□□□□ -1.03
HMGN1-206ENST00000431390 A0A1B0GU69 56 aa8.63□□□□□ -1.03
HMGN1-206ENST00000431390 PRR15LQ9BU68 103 aa8.61□□□□□ -1.03
HMGN1-206ENST00000431390 ADM2Q7Z4H4 148 aa8.56□□□□□ -1.04
HMGN1-206ENST00000431390 PSPHP1O15172 72 aa8.54□□□□□ -1.04
HMGN1-206ENST00000431390 LCE2BO14633 110 aa8.52□□□□□ -1.05
HMGN1-206ENST00000431390 SSPOA2VEC9 5147 aa8.51□□□□□ -1.05
HMGN1-206ENST00000431390 USH2AO75445 5202 aa8.5□□□□□ -1.05
HMGN1-206ENST00000431390 P0C880 135 aa8.49□□□□□ -1.05
HMGN1-206ENST00000431390 Q5VV11 94 aa8.48□□□□□ -1.05
HMGN1-206ENST00000431390 KRTAP9-8Q9BYQ0 159 aa8.43□□□□□ -1.06
HMGN1-206ENST00000431390 A0A1B0GU33 70 aa8.41□□□□□ -1.06
HMGN1-206ENST00000431390 MT2AP02795 61 aa8.39□□□□□ -1.07
HMGN1-206ENST00000431390 FCGBPQ9Y6R7 5405 aaPredicted RBP8.38□□□□□ -1.07
HMGN1-206ENST00000431390 UQCR11O14957 56 aa8.35□□□□□ -1.07
HMGN1-206ENST00000431390 CRIPTQ9P021 101 aa8.34□□□□□ -1.07
HMGN1-206ENST00000431390 MT1FP04733 61 aa8.33□□□□□ -1.08
HMGN1-206ENST00000431390 M0QZ58 72 aa8.31□□□□□ -1.08
HMGN1-206ENST00000431390 KRTAP10-10P60014 251 aa8.31□□□□□ -1.08
HMGN1-206ENST00000431390 KRTAP19-1Q8IUB9 90 aa8.31□□□□□ -1.08
HMGN1-206ENST00000431390 A6NED7 52 aa8.3□□□□□ -1.08
HMGN1-206ENST00000431390 R4GN34 69 aa8.3□□□□□ -1.08
HMGN1-206ENST00000431390 KRTAP13-4Q3LI77 160 aa8.27□□□□□ -1.09
HMGN1-206ENST00000431390 MACF1Q9UPN3 7388 aaKnown RBP8.25□□□□□ -1.09
HMGN1-206ENST00000431390 SPATA8Q6RVD6 105 aa8.25□□□□□ -1.09
HMGN1-206ENST00000431390 MIR22HGQ0VDD5 57 aa8.23□□□□□ -1.09
HMGN1-206ENST00000431390 SYNE2Q8WXH0 6885 aaKnown RBP8.22□□□□□ -1.09
HMGN1-206ENST00000431390 SPRR2GQ9BYE4 73 aa8.18□□□□□ -1.1
HMGN1-206ENST00000431390 KRTAP9-3Q9BYQ3 159 aa8.17□□□□□ -1.1
HMGN1-206ENST00000431390 CDC42SE1Q9NRR8 79 aa8.15□□□□□ -1.1
HMGN1-206ENST00000431390 A8MU10 97 aa8.1□□□□□ -1.11
HMGN1-206ENST00000431390 LINC01554Q52M75 96 aa8.09□□□□□ -1.11
HMGN1-206ENST00000431390 A0A0D9SG42 100 aa8.08□□□□□ -1.12
HMGN1-206ENST00000431390 BRK1Q8WUW1 75 aa8.08□□□□□ -1.12
HMGN1-206ENST00000431390 A6NN06 94 aa8.02□□□□□ -1.13
HMGN1-206ENST00000431390 KRTAP19-6Q3LI70 58 aa8.01□□□□□ -1.13
HMGN1-206ENST00000431390 KRTAP19-8Q3LI54 63 aa7.99□□□□□ -1.13
HMGN1-206ENST00000431390 KRTAP12-1P59990 96 aa7.96□□□□□ -1.14
HMGN1-206ENST00000431390 LOC100996750A0A140TA64 210 aa7.93□□□□□ -1.14
HMGN1-206ENST00000431390 SPINT4Q6UDR6 99 aa7.93□□□□□ -1.14
HMGN1-206ENST00000431390 KRTAP4-6Q9BYQ5 205 aa7.93□□□□□ -1.14
HMGN1-206ENST00000431390 KRTAP12-2P59991 146 aa7.92□□□□□ -1.14
HMGN1-206ENST00000431390 K7ERS5 55 aa7.91□□□□□ -1.14
HMGN1-206ENST00000431390 KRTAP6-3Q3LI67 103 aa7.91□□□□□ -1.14
HMGN1-206ENST00000431390 MT1BP07438 61 aa7.86□□□□□ -1.15
HMGN1-206ENST00000431390 PLAC4Q8WY50 150 aa7.86□□□□□ -1.15
HMGN1-206ENST00000431390 PRO0628Q9UI54 55 aa7.84□□□□□ -1.15
HMGN1-206ENST00000431390 NEBP20929 6669 aa7.76□□□□□ -1.17
HMGN1-206ENST00000431390 CAMK2N1Q7Z7J9 78 aa7.74□□□□□ -1.17
HMGN1-206ENST00000431390 PMAIP1Q13794 54 aa7.64□□□□□ -1.19
HMGN1-206ENST00000431390 MUC12Q9UKN1 5478 aa7.62□□□□□ -1.19
HMGN1-206ENST00000431390 MT1XP80297 61 aa7.57□□□□□ -1.2
HMGN1-206ENST00000431390 KRTAP10-5P60370 271 aa7.55□□□□□ -1.2
HMGN1-206ENST00000431390 KRTAP20-1Q3LI63 56 aa7.55□□□□□ -1.2
HMGN1-206ENST00000431390 PRO2289Q9P1D8 64 aa7.55□□□□□ -1.2
HMGN1-206ENST00000431390 ROMO1P60602 79 aa7.54□□□□□ -1.2
HMGN1-206ENST00000431390 C10orf95Q9H7T3 257 aa7.54□□□□□ -1.2
HMGN1-206ENST00000431390 KRTAP5-9P26371 169 aa7.37□□□□□ -1.23
HMGN1-206ENST00000431390 TNP1P09430 55 aa7.36□□□□□ -1.23
HMGN1-206ENST00000431390 KRTAP25-1Q3LHN0 102 aa7.35□□□□□ -1.23
HMGN1-206ENST00000431390 MDN1Q9NU22 5596 aa7.31□□□□□ -1.24
HMGN1-206ENST00000431390 KMT2DO14686 5537 aa7.31□□□□□ -1.24
HMGN1-206ENST00000431390 KTN1-AS1Q86SY8 53 aa7.29□□□□□ -1.24
HMGN1-206ENST00000431390 KRTAP10-7P60409 375 aaPredicted RBP7.25□□□□□ -1.25
HMGN1-206ENST00000431390 KRTAP2-3P0C7H8 128 aa7.22□□□□□ -1.25
HMGN1-206ENST00000431390 KRTAP2-4Q9BYR9 128 aa7.22□□□□□ -1.25
HMGN1-206ENST00000431390 KRTAP10-12P60413 245 aa7.2□□□□□ -1.26
HMGN1-206ENST00000431390 PRAC1Q96KF2 57 aa7.14□□□□□ -1.27
HMGN1-206ENST00000431390 KRTAP23-1A1A580 65 aa7.13□□□□□ -1.27
HMGN1-206ENST00000431390 PP632Q6XCG6 107 aa7.08□□□□□ -1.28
HMGN1-206ENST00000431390 SPRR2EP22531 72 aa7.08□□□□□ -1.28
HMGN1-206ENST00000431390 SPRR2BP35325 72 aa7.08□□□□□ -1.28
HMGN1-206ENST00000431390 SPRR2AP35326 72 aa7.08□□□□□ -1.28
HMGN1-206ENST00000431390 SPRR2FQ96RM1 72 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms