RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 GPR98Q8WXG9 6306 aa9.17□□□□□ -0.94
PTPRA-207ENST00000431048 H3BT86 120 aa9.16□□□□□ -0.94
PTPRA-207ENST00000431048 A0A087WVE0 104 aa9.15□□□□□ -0.94
PTPRA-207ENST00000431048 LCE3BQ5TA77 95 aa9.13□□□□□ -0.95
PTPRA-207ENST00000431048 TP53AIP1Q9HCN2 124 aa9.12□□□□□ -0.95
PTPRA-207ENST00000431048 A8MUN3 132 aa9.11□□□□□ -0.95
PTPRA-207ENST00000431048 PLAC4Q8WY50 150 aa9.1□□□□□ -0.95
PTPRA-207ENST00000431048 KRTAP4-8A0A0G2JLE6 195 aa9.07□□□□□ -0.96
PTPRA-207ENST00000431048 TSTD3H0UI37 97 aa9.07□□□□□ -0.96
PTPRA-207ENST00000431048 KRTAP4-8Q9BYQ9 185 aa9.07□□□□□ -0.96
PTPRA-207ENST00000431048 CYP4F30PQ9H0H9 118 aa9.06□□□□□ -0.96
PTPRA-207ENST00000431048 NDUFC1O43677 76 aa9.01□□□□□ -0.97
PTPRA-207ENST00000431048 ADM2Q7Z4H4 148 aa8.98□□□□□ -0.97
PTPRA-207ENST00000431048 UBL5Q9BZL1 73 aa8.98□□□□□ -0.97
PTPRA-207ENST00000431048 LOC101927531A0A1B0GV80 90 aa8.88□□□□□ -0.99
PTPRA-207ENST00000431048 C9orf118A6NHY6 69 aa8.88□□□□□ -0.99
PTPRA-207ENST00000431048 A0A1W2PPM0 123 aa8.86□□□□□ -0.99
PTPRA-207ENST00000431048 KRTAP10-12P60413 245 aa8.83□□□□□ -1
PTPRA-207ENST00000431048 K7EP34 96 aa8.82□□□□□ -1
PTPRA-207ENST00000431048 KRTAP10-7P60409 375 aaPredicted RBP8.82□□□□□ -1
PTPRA-207ENST00000431048 R4GN34 69 aa8.81□□□□□ -1
PTPRA-207ENST00000431048 DSTQ03001 7570 aaKnown RBP8.8□□□□□ -1
PTPRA-207ENST00000431048 TRAV22A0A0B4J277 110 aa8.8□□□□□ -1
PTPRA-207ENST00000431048 BATFQ16520 125 aa8.8□□□□□ -1
PTPRA-207ENST00000431048 TAX1BP3O14907 124 aa8.77□□□□□ -1.01
PTPRA-207ENST00000431048 ACYP1P07311 99 aa8.76□□□□□ -1.01
PTPRA-207ENST00000431048 TMA7Q9Y2S6 64 aaKnown RBP8.72□□□□□ -1.01
PTPRA-207ENST00000431048 M0QZ58 72 aa8.7□□□□□ -1.02
PTPRA-207ENST00000431048 C20orf197Q8N268 126 aa8.7□□□□□ -1.02
PTPRA-207ENST00000431048 P0C880 135 aa8.69□□□□□ -1.02
PTPRA-207ENST00000431048 SPCS1Q9Y6A9 102 aa8.66□□□□□ -1.02
PTPRA-207ENST00000431048 KRTAP4-9Q9BYQ8 210 aa8.64□□□□□ -1.03
PTPRA-207ENST00000431048 PRO0461Q9UI25 63 aa8.61□□□□□ -1.03
PTPRA-207ENST00000431048 ATOX1O00244 68 aa8.6□□□□□ -1.03
PTPRA-207ENST00000431048 LINC01554Q52M75 96 aa8.58□□□□□ -1.04
PTPRA-207ENST00000431048 UQCRQO14949 82 aa8.57□□□□□ -1.04
PTPRA-207ENST00000431048 H0Y9P7 68 aa8.56□□□□□ -1.04
PTPRA-207ENST00000431048 SMIM6P0DI80 62 aa8.56□□□□□ -1.04
PTPRA-207ENST00000431048 LCE5AQ5TCM9 118 aa8.47□□□□□ -1.05
PTPRA-207ENST00000431048 LCE1DQ5T752 114 aa8.39□□□□□ -1.07
PTPRA-207ENST00000431048 HMCN1Q96RW7 5635 aa8.38□□□□□ -1.07
PTPRA-207ENST00000431048 LINC00208Q96KT6 92 aa8.37□□□□□ -1.07
PTPRA-207ENST00000431048 KRTAP19-3Q7Z4W3 81 aa8.34□□□□□ -1.07
PTPRA-207ENST00000431048 KRTAP19-7Q3SYF9 63 aa8.31□□□□□ -1.08
PTPRA-207ENST00000431048 AHNAK2Q8IVF2 5795 aa8.3□□□□□ -1.08
PTPRA-207ENST00000431048 MT-ATP8P03928 68 aa8.29□□□□□ -1.08
PTPRA-207ENST00000431048 HIST1H4AP62805 103 aaKnown RBP8.28□□□□□ -1.08
PTPRA-207ENST00000431048 MT1EP04732 61 aa8.27□□□□□ -1.09
PTPRA-207ENST00000431048 ETDBQ3ZM63 59 aa8.27□□□□□ -1.09
PTPRA-207ENST00000431048 ATP5EP2Q5VTU8 51 aa8.27□□□□□ -1.09
PTPRA-207ENST00000431048 F8W1H4 67 aa8.25□□□□□ -1.09
PTPRA-207ENST00000431048 COL5A1-AS1Q5SY13 56 aa8.24□□□□□ -1.09
PTPRA-207ENST00000431048 LCE4AQ5TA78 99 aa8.24□□□□□ -1.09
PTPRA-207ENST00000431048 DMAC1Q96GE9 116 aa8.24□□□□□ -1.09
PTPRA-207ENST00000431048 MP68P56378 58 aa8.22□□□□□ -1.09
PTPRA-207ENST00000431048 CYSTM1Q9H1C7 97 aa8.18□□□□□ -1.1
PTPRA-207ENST00000431048 MT4P47944 62 aa8.17□□□□□ -1.1
PTPRA-207ENST00000431048 GTF2H5Q6ZYL4 71 aa8.17□□□□□ -1.1
PTPRA-207ENST00000431048 KRTAP5-10Q6L8G5 202 aa8.16□□□□□ -1.1
PTPRA-207ENST00000431048 OCR1Q9BZK8 76 aa8.13□□□□□ -1.11
PTPRA-207ENST00000431048 MT1GP13640 62 aa8.1□□□□□ -1.11
PTPRA-207ENST00000431048 FAM240AA0A1B0GVK7 77 aa8.09□□□□□ -1.11
PTPRA-207ENST00000431048 TRAV7A0A075B6U4 112 aa8.06□□□□□ -1.12
PTPRA-207ENST00000431048 H3BPC8 53 aa8.06□□□□□ -1.12
PTPRA-207ENST00000431048 PP632Q6XCG6 107 aa8.01□□□□□ -1.13
PTPRA-207ENST00000431048 KRTAP5-4Q6L8H1 288 aa7.98□□□□□ -1.13
PTPRA-207ENST00000431048 CAMK2N1Q7Z7J9 78 aa7.98□□□□□ -1.13
PTPRA-207ENST00000431048 KRTAP5-7Q6L8G8 165 aa7.95□□□□□ -1.14
PTPRA-207ENST00000431048 SPTSSBQ8NFR3 76 aa7.95□□□□□ -1.14
PTPRA-207ENST00000431048 LINC00643Q86TS7 51 aa7.94□□□□□ -1.14
PTPRA-207ENST00000431048 LOC105371267A0A1B0GV96 52 aa7.92□□□□□ -1.14
PTPRA-207ENST00000431048 ACYP2P14621 99 aa7.91□□□□□ -1.14
PTPRA-207ENST00000431048 MT1MQ8N339 61 aa7.91□□□□□ -1.14
PTPRA-207ENST00000431048 KRTAP19-5Q3LI72 72 aa7.9□□□□□ -1.14
PTPRA-207ENST00000431048 KRTAP4-6Q9BYQ5 205 aa7.9□□□□□ -1.14
PTPRA-207ENST00000431048 KRTAP13-4Q3LI77 160 aa7.84□□□□□ -1.15
PTPRA-207ENST00000431048 A0A0D9SG42 100 aa7.83□□□□□ -1.16
PTPRA-207ENST00000431048 KRTAP5-3Q6L8H2 238 aa7.81□□□□□ -1.16
PTPRA-207ENST00000431048 MT1LQ93083 61 aa7.78□□□□□ -1.16
PTPRA-207ENST00000431048 CHKB-CPT1BH3BT56 60 aa7.71□□□□□ -1.18
PTPRA-207ENST00000431048 KRTAP4-3Q9BYR4 195 aa7.71□□□□□ -1.18
PTPRA-207ENST00000431048 SCGB1A1P11684 91 aa7.65□□□□□ -1.18
PTPRA-207ENST00000431048 KRTAP20-2Q3LI61 65 aa7.55□□□□□ -1.2
PTPRA-207ENST00000431048 SPRR5A0A1B0GTR4 108 aa7.52□□□□□ -1.21
PTPRA-207ENST00000431048 SPINT4Q6UDR6 99 aa7.44□□□□□ -1.22
PTPRA-207ENST00000431048 C10orf95Q9H7T3 257 aa7.44□□□□□ -1.22
PTPRA-207ENST00000431048 PCP4L1A6NKN8 68 aa7.38□□□□□ -1.23
PTPRA-207ENST00000431048 LCE3AQ5TA76 89 aa7.38□□□□□ -1.23
PTPRA-207ENST00000431048 KRTAP12-1P59990 96 aa7.37□□□□□ -1.23
PTPRA-207ENST00000431048 KRTAP5-5Q701N2 237 aaPredicted RBP7.35□□□□□ -1.23
PTPRA-207ENST00000431048 SPATA8Q6RVD6 105 aa7.34□□□□□ -1.23
PTPRA-207ENST00000431048 KRTAP4-7Q9BYR0 210 aa7.34□□□□□ -1.23
PTPRA-207ENST00000431048 KRTAP12-4P60329 112 aa7.32□□□□□ -1.24
PTPRA-207ENST00000431048 SMIM20Q8N5G0 67 aa7.32□□□□□ -1.24
PTPRA-207ENST00000431048 SPANXA2-OT1Q8N9U9 137 aa7.31□□□□□ -1.24
PTPRA-207ENST00000431048 SERP1Q9Y6X1 66 aa7.27□□□□□ -1.25
PTPRA-207ENST00000431048 SEC61GP60059 68 aa7.26□□□□□ -1.25
PTPRA-207ENST00000431048 SYNE1Q8NF91 8797 aaKnown RBP7.23□□□□□ -1.25
PTPRA-207ENST00000431048 SNURFQ9Y675 71 aa7.22□□□□□ -1.25
PTPRA-207ENST00000431048 A0A1B0GU33 70 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms