RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 SERP2Q8N6R1 65 aa11.73□□□□□ -0.53
CPNE1-212ENST00000430570 SNURFQ9Y675 71 aa11.7□□□□□ -0.54
CPNE1-212ENST00000430570 DMAC1Q96GE9 116 aa11.67□□□□□ -0.54
CPNE1-212ENST00000430570 FSIP2Q5CZC0 6907 aa11.67□□□□□ -0.54
CPNE1-212ENST00000430570 LCE2BO14633 110 aa11.65□□□□□ -0.54
CPNE1-212ENST00000430570 NDUFC1O43677 76 aa11.63□□□□□ -0.55
CPNE1-212ENST00000430570 C20orf197Q8N268 126 aa11.63□□□□□ -0.55
CPNE1-212ENST00000430570 KRTAP9-6A0A140TA67 174 aa11.62□□□□□ -0.55
CPNE1-212ENST00000430570 CRCT1Q9UGL9 99 aa11.6□□□□□ -0.55
CPNE1-212ENST00000430570 USH2AO75445 5202 aa11.53□□□□□ -0.56
CPNE1-212ENST00000430570 COX7CP15954 63 aa11.51□□□□□ -0.57
CPNE1-212ENST00000430570 ACYP2P14621 99 aa11.47□□□□□ -0.57
CPNE1-212ENST00000430570 SPANXA2-OT1Q8N9U9 137 aa11.42□□□□□ -0.58
CPNE1-212ENST00000430570 KRTAP19-1Q8IUB9 90 aa11.41□□□□□ -0.58
CPNE1-212ENST00000430570 H0YAA0 97 aa11.4□□□□□ -0.58
CPNE1-212ENST00000430570 SSPOA2VEC9 5147 aa11.35□□□□□ -0.59
CPNE1-212ENST00000430570 ADM2Q7Z4H4 148 aa11.35□□□□□ -0.59
CPNE1-212ENST00000430570 ANAPC13Q9BS18 74 aa11.34□□□□□ -0.59
CPNE1-212ENST00000430570 CYSTM1Q9H1C7 97 aa11.33□□□□□ -0.6
CPNE1-212ENST00000430570 SPRR2GQ9BYE4 73 aa11.31□□□□□ -0.6
CPNE1-212ENST00000430570 CHKB-CPT1BH3BT56 60 aa11.25□□□□□ -0.61
CPNE1-212ENST00000430570 H7BZZ5 65 aa11.24□□□□□ -0.61
CPNE1-212ENST00000430570 CRIPTQ9P021 101 aa11.24□□□□□ -0.61
CPNE1-212ENST00000430570 P0C880 135 aa11.18□□□□□ -0.62
CPNE1-212ENST00000430570 SPTSSBQ8NFR3 76 aa11.18□□□□□ -0.62
CPNE1-212ENST00000430570 KRTAP3-2Q9BYR7 98 aa11.18□□□□□ -0.62
CPNE1-212ENST00000430570 KRTAP19-8Q3LI54 63 aa11.17□□□□□ -0.62
CPNE1-212ENST00000430570 CCDC179H3BU77 68 aa11.16□□□□□ -0.62
CPNE1-212ENST00000430570 MT1BP07438 61 aa11.14□□□□□ -0.63
CPNE1-212ENST00000430570 KRTAP19-6Q3LI70 58 aa11.11□□□□□ -0.63
CPNE1-212ENST00000430570 COA5Q86WW8 74 aa11.1□□□□□ -0.63
CPNE1-212ENST00000430570 Q5VV11 94 aa11.09□□□□□ -0.63
CPNE1-212ENST00000430570 FCGBPQ9Y6R7 5405 aaPredicted RBP10.99□□□□□ -0.65
CPNE1-212ENST00000430570 R4GN34 69 aa10.97□□□□□ -0.65
CPNE1-212ENST00000430570 M0QZ58 72 aa10.93□□□□□ -0.66
CPNE1-212ENST00000430570 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.8□□□□□ -0.68
CPNE1-212ENST00000430570 A6NN06 94 aa10.78□□□□□ -0.68
CPNE1-212ENST00000430570 LINC01554Q52M75 96 aa10.77□□□□□ -0.69
CPNE1-212ENST00000430570 ATP5EP56381 51 aaPredicted RBP10.76□□□□□ -0.69
CPNE1-212ENST00000430570 KRTAP10-5P60370 271 aa10.75□□□□□ -0.69
CPNE1-212ENST00000430570 PLAC4Q8WY50 150 aa10.69□□□□□ -0.7
CPNE1-212ENST00000430570 TMEM258P61165 79 aa10.68□□□□□ -0.7
CPNE1-212ENST00000430570 SEC61GP60059 68 aa10.66□□□□□ -0.7
CPNE1-212ENST00000430570 KRTAP13-4Q3LI77 160 aa10.66□□□□□ -0.7
CPNE1-212ENST00000430570 MACF1Q9UPN3 7388 aaKnown RBP10.65□□□□□ -0.7
CPNE1-212ENST00000430570 SERP1Q9Y6X1 66 aa10.65□□□□□ -0.7
CPNE1-212ENST00000430570 MT1XP80297 61 aa10.56□□□□□ -0.72
CPNE1-212ENST00000430570 KRTAP9-7A8MTY7 169 aa10.51□□□□□ -0.73
CPNE1-212ENST00000430570 A0A1B0GU69 56 aa10.5□□□□□ -0.73
CPNE1-212ENST00000430570 A0A1B0GU33 70 aa10.49□□□□□ -0.73
CPNE1-212ENST00000430570 PRO2289Q9P1D8 64 aa10.45□□□□□ -0.74
CPNE1-212ENST00000430570 SYNE2Q8WXH0 6885 aaKnown RBP10.44□□□□□ -0.74
CPNE1-212ENST00000430570 SPATA8Q6RVD6 105 aa10.44□□□□□ -0.74
CPNE1-212ENST00000430570 LINC01558Q9Y6Z2 57 aa10.37□□□□□ -0.75
CPNE1-212ENST00000430570 A0A0D9SG42 100 aa10.35□□□□□ -0.75
CPNE1-212ENST00000430570 PCP4P48539 62 aa10.3□□□□□ -0.76
CPNE1-212ENST00000430570 PRR15LQ9BU68 103 aa10.28□□□□□ -0.76
CPNE1-212ENST00000430570 KRTAP6-3Q3LI67 103 aa10.25□□□□□ -0.77
CPNE1-212ENST00000430570 A8MU10 97 aa10.16□□□□□ -0.78
CPNE1-212ENST00000430570 KRTAP12-1P59990 96 aa10.16□□□□□ -0.78
CPNE1-212ENST00000430570 SPINT4Q6UDR6 99 aa10.16□□□□□ -0.78
CPNE1-212ENST00000430570 CAMK2N1Q7Z7J9 78 aa10.16□□□□□ -0.78
CPNE1-212ENST00000430570 SMIM26A0A096LP01 95 aa10.15□□□□□ -0.78
CPNE1-212ENST00000430570 KRTAP12-2P59991 146 aa10.15□□□□□ -0.78
CPNE1-212ENST00000430570 KRTAP10-7P60409 375 aaPredicted RBP10.1□□□□□ -0.79
CPNE1-212ENST00000430570 KMT2DO14686 5537 aa10.05□□□□□ -0.8
CPNE1-212ENST00000430570 KRTAP10-12P60413 245 aa10.01□□□□□ -0.81
CPNE1-212ENST00000430570 KRTAP4-8A0A0G2JLE6 195 aa9.99□□□□□ -0.81
CPNE1-212ENST00000430570 Q1T7F1 81 aa9.99□□□□□ -0.81
CPNE1-212ENST00000430570 KRTAP4-8Q9BYQ9 185 aa9.99□□□□□ -0.81
CPNE1-212ENST00000430570 UQCR11O14957 56 aa9.98□□□□□ -0.81
CPNE1-212ENST00000430570 V9GYY9 64 aa9.98□□□□□ -0.81
CPNE1-212ENST00000430570 KRTAP5-9P26371 169 aa9.97□□□□□ -0.81
CPNE1-212ENST00000430570 PSPHP1O15172 72 aa9.93□□□□□ -0.82
CPNE1-212ENST00000430570 KRTAP8-1Q8IUC2 63 aa9.91□□□□□ -0.82
CPNE1-212ENST00000430570 RPS28P62857 69 aaKnown RBP9.9□□□□□ -0.82
CPNE1-212ENST00000430570 MIR22HGQ0VDD5 57 aa9.82□□□□□ -0.84
CPNE1-212ENST00000430570 MUC12Q9UKN1 5478 aa9.82□□□□□ -0.84
CPNE1-212ENST00000430570 SPRR2FQ96RM1 72 aa9.8□□□□□ -0.84
CPNE1-212ENST00000430570 NEBP20929 6669 aa9.77□□□□□ -0.85
CPNE1-212ENST00000430570 C10orf95Q9H7T3 257 aa9.7□□□□□ -0.86
CPNE1-212ENST00000430570 A6NED7 52 aa9.59□□□□□ -0.87
CPNE1-212ENST00000430570 MDN1Q9NU22 5596 aa9.55□□□□□ -0.88
CPNE1-212ENST00000430570 SPRR2EP22531 72 aa9.54□□□□□ -0.88
CPNE1-212ENST00000430570 SPRR2BP35325 72 aa9.54□□□□□ -0.88
CPNE1-212ENST00000430570 SPRR2AP35326 72 aa9.54□□□□□ -0.88
CPNE1-212ENST00000430570 TNP1P09430 55 aa9.51□□□□□ -0.89
CPNE1-212ENST00000430570 LCE1AQ5T7P2 110 aa9.5□□□□□ -0.89
CPNE1-212ENST00000430570 K7ERS5 55 aa9.47□□□□□ -0.89
CPNE1-212ENST00000430570 KRTAP19-7Q3SYF9 63 aa9.43□□□□□ -0.9
CPNE1-212ENST00000430570 LCE3AQ5TA76 89 aa9.35□□□□□ -0.91
CPNE1-212ENST00000430570 KRTAP19-5Q3LI72 72 aa9.32□□□□□ -0.92
CPNE1-212ENST00000430570 MT1EP04732 61 aa9.31□□□□□ -0.92
CPNE1-212ENST00000430570 CDC42SE1Q9NRR8 79 aa9.26□□□□□ -0.93
CPNE1-212ENST00000430570 KRTAP20-1Q3LI63 56 aa9.25□□□□□ -0.93
CPNE1-212ENST00000430570 SPRR2DP22532 72 aa9.21□□□□□ -0.94
CPNE1-212ENST00000430570 KRTAP25-1Q3LHN0 102 aa9.19□□□□□ -0.94
CPNE1-212ENST00000430570 KRTAP2-3P0C7H8 128 aa9.14□□□□□ -0.95
CPNE1-212ENST00000430570 KRTAP2-4Q9BYR9 128 aa9.14□□□□□ -0.95
CPNE1-212ENST00000430570 KRTAP19-3Q7Z4W3 81 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms