RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 SYNE2Q8WXH0 6885 aaKnown RBP7.93□□□□□ -1.14
NUP50-208ENST00000430547 SPRR2GQ9BYE4 73 aa7.92□□□□□ -1.14
NUP50-208ENST00000430547 A0A1B0GV90 55 aa7.87□□□□□ -1.15
NUP50-208ENST00000430547 NDUFC1O43677 76 aa7.87□□□□□ -1.15
NUP50-208ENST00000430547 LINC00208Q96KT6 92 aa7.86□□□□□ -1.15
NUP50-208ENST00000430547 A6NN06 94 aa7.85□□□□□ -1.15
NUP50-208ENST00000430547 MT1BP07438 61 aa7.85□□□□□ -1.15
NUP50-208ENST00000430547 KRTAP19-8Q3LI54 63 aa7.85□□□□□ -1.15
NUP50-208ENST00000430547 IMUPQ9GZP8 106 aa7.85□□□□□ -1.15
NUP50-208ENST00000430547 A8MUN3 132 aa7.84□□□□□ -1.15
NUP50-208ENST00000430547 MP68P56378 58 aa7.84□□□□□ -1.15
NUP50-208ENST00000430547 CRIPTQ9P021 101 aa7.84□□□□□ -1.15
NUP50-208ENST00000430547 J3QR89 54 aa7.8□□□□□ -1.16
NUP50-208ENST00000430547 OCR1Q9BZK8 76 aa7.79□□□□□ -1.16
NUP50-208ENST00000430547 KRTAP6-3Q3LI67 103 aa7.77□□□□□ -1.17
NUP50-208ENST00000430547 H0YAA0 97 aa7.76□□□□□ -1.17
NUP50-208ENST00000430547 H3BPC8 53 aa7.7□□□□□ -1.18
NUP50-208ENST00000430547 SCGB1A1P11684 91 aa7.7□□□□□ -1.18
NUP50-208ENST00000430547 KRTAP10-5P60370 271 aa7.7□□□□□ -1.18
NUP50-208ENST00000430547 ADM2Q7Z4H4 148 aa7.7□□□□□ -1.18
NUP50-208ENST00000430547 DMAC1Q96GE9 116 aa7.59□□□□□ -1.19
NUP50-208ENST00000430547 C20orf197Q8N268 126 aa7.57□□□□□ -1.2
NUP50-208ENST00000430547 R4GN34 69 aa7.54□□□□□ -1.2
NUP50-208ENST00000430547 PLAC4Q8WY50 150 aa7.5□□□□□ -1.21
NUP50-208ENST00000430547 P0C880 135 aa7.49□□□□□ -1.21
NUP50-208ENST00000430547 PRO2289Q9P1D8 64 aa7.49□□□□□ -1.21
NUP50-208ENST00000430547 K7ERU9 68 aa7.47□□□□□ -1.21
NUP50-208ENST00000430547 M0QZ58 72 aa7.47□□□□□ -1.21
NUP50-208ENST00000430547 SMIM20Q8N5G0 67 aa7.47□□□□□ -1.21
NUP50-208ENST00000430547 MT-ATP8P03928 68 aa7.46□□□□□ -1.22
NUP50-208ENST00000430547 TRAV7A0A075B6U4 112 aa7.45□□□□□ -1.22
NUP50-208ENST00000430547 ACYP2P14621 99 aa7.44□□□□□ -1.22
NUP50-208ENST00000430547 NEBP20929 6669 aa7.43□□□□□ -1.22
NUP50-208ENST00000430547 MUC12Q9UKN1 5478 aa7.41□□□□□ -1.22
NUP50-208ENST00000430547 KRTAP5-9P26371 169 aa7.4□□□□□ -1.22
NUP50-208ENST00000430547 SPTSSBQ8NFR3 76 aa7.39□□□□□ -1.23
NUP50-208ENST00000430547 MT1XP80297 61 aa7.37□□□□□ -1.23
NUP50-208ENST00000430547 LINC01554Q52M75 96 aa7.37□□□□□ -1.23
NUP50-208ENST00000430547 KRTAP3-2Q9BYR7 98 aa7.37□□□□□ -1.23
NUP50-208ENST00000430547 CHKB-CPT1BH3BT56 60 aa7.34□□□□□ -1.23
NUP50-208ENST00000430547 SNURFQ9Y675 71 aa7.29□□□□□ -1.24
NUP50-208ENST00000430547 KMT2DO14686 5537 aa7.28□□□□□ -1.24
NUP50-208ENST00000430547 KRTAP20-1Q3LI63 56 aa7.23□□□□□ -1.25
NUP50-208ENST00000430547 SPRR2FQ96RM1 72 aa7.23□□□□□ -1.25
NUP50-208ENST00000430547 MDN1Q9NU22 5596 aa7.23□□□□□ -1.25
NUP50-208ENST00000430547 KRTAP12-2P59991 146 aa7.21□□□□□ -1.26
NUP50-208ENST00000430547 KRTAP8-1Q8IUC2 63 aa7.21□□□□□ -1.26
NUP50-208ENST00000430547 SPANXA2-OT1Q8N9U9 137 aa7.2□□□□□ -1.26
NUP50-208ENST00000430547 SERP2Q8N6R1 65 aa7.18□□□□□ -1.26
NUP50-208ENST00000430547 SPRR2EP22531 72 aa7.13□□□□□ -1.27
NUP50-208ENST00000430547 SPRR2BP35325 72 aa7.13□□□□□ -1.27
NUP50-208ENST00000430547 SPRR2AP35326 72 aa7.13□□□□□ -1.27
NUP50-208ENST00000430547 KRTAP4-8A0A0G2JLE6 195 aa7.05□□□□□ -1.28
NUP50-208ENST00000430547 KRTAP4-8Q9BYQ9 185 aa7.05□□□□□ -1.28
NUP50-208ENST00000430547 KRTAP10-7P60409 375 aaPredicted RBP7.04□□□□□ -1.28
NUP50-208ENST00000430547 KRTAP2-3P0C7H8 128 aa7.02□□□□□ -1.29
NUP50-208ENST00000430547 KRTAP2-4Q9BYR9 128 aa7.02□□□□□ -1.29
NUP50-208ENST00000430547 KRTAP10-12P60413 245 aa7.01□□□□□ -1.29
NUP50-208ENST00000430547 COA5Q86WW8 74 aa7.01□□□□□ -1.29
NUP50-208ENST00000430547 LCE1AQ5T7P2 110 aa6.98□□□□□ -1.29
NUP50-208ENST00000430547 KRTAP13-4Q3LI77 160 aa6.97□□□□□ -1.29
NUP50-208ENST00000430547 SEC61GP60059 68 aa6.96□□□□□ -1.3
NUP50-208ENST00000430547 CAMK2N1Q7Z7J9 78 aa6.95□□□□□ -1.3
NUP50-208ENST00000430547 COX7CP15954 63 aa6.94□□□□□ -1.3
NUP50-208ENST00000430547 SERP1Q9Y6X1 66 aa6.93□□□□□ -1.3
NUP50-208ENST00000430547 SPRR2DP22532 72 aa6.9□□□□□ -1.3
NUP50-208ENST00000430547 A0A0D9SG42 100 aa6.83□□□□□ -1.32
NUP50-208ENST00000430547 H7BZZ5 65 aa6.83□□□□□ -1.32
NUP50-208ENST00000430547 KRTAP2-2Q9BYT5 123 aa6.8□□□□□ -1.32
NUP50-208ENST00000430547 KRTAP2-1Q9BYU5 128 aa6.8□□□□□ -1.32
NUP50-208ENST00000430547 CYSTM1Q9H1C7 97 aa6.79□□□□□ -1.32
NUP50-208ENST00000430547 A0A1B0GU33 70 aa6.78□□□□□ -1.32
NUP50-208ENST00000430547 SPATA8Q6RVD6 105 aa6.78□□□□□ -1.32
NUP50-208ENST00000430547 SPINT4Q6UDR6 99 aa6.75□□□□□ -1.33
NUP50-208ENST00000430547 ANAPC13Q9BS18 74 aa6.71□□□□□ -1.34
NUP50-208ENST00000430547 LCE3BQ5TA77 95 aa6.69□□□□□ -1.34
NUP50-208ENST00000430547 A0A1B0GU69 56 aa6.68□□□□□ -1.34
NUP50-208ENST00000430547 KRTAP12-1P59990 96 aa6.64□□□□□ -1.35
NUP50-208ENST00000430547 SMIM26A0A096LP01 95 aa6.62□□□□□ -1.35
NUP50-208ENST00000430547 KRTAP19-7Q3SYF9 63 aa6.58□□□□□ -1.36
NUP50-208ENST00000430547 CCDC179H3BU77 68 aa6.54□□□□□ -1.36
NUP50-208ENST00000430547 MT1EP04732 61 aa6.54□□□□□ -1.36
NUP50-208ENST00000430547 ATP5EP56381 51 aaPredicted RBP6.53□□□□□ -1.36
NUP50-208ENST00000430547 A8MU10 97 aa6.51□□□□□ -1.37
NUP50-208ENST00000430547 PRR15LQ9BU68 103 aa6.51□□□□□ -1.37
NUP50-208ENST00000430547 LCE5AQ5TCM9 118 aa6.5□□□□□ -1.37
NUP50-208ENST00000430547 KRTAP19-3Q7Z4W3 81 aa6.5□□□□□ -1.37
NUP50-208ENST00000430547 KRTAP19-5Q3LI72 72 aa6.44□□□□□ -1.38
NUP50-208ENST00000430547 PCP4P48539 62 aa6.42□□□□□ -1.38
NUP50-208ENST00000430547 DSTQ03001 7570 aaKnown RBP6.42□□□□□ -1.38
NUP50-208ENST00000430547 TNP1P09430 55 aa6.39□□□□□ -1.39
NUP50-208ENST00000430547 LINC01558Q9Y6Z2 57 aa6.37□□□□□ -1.39
NUP50-208ENST00000430547 PP632Q6XCG6 107 aa6.36□□□□□ -1.39
NUP50-208ENST00000430547 MT1GP13640 62 aa6.35□□□□□ -1.39
NUP50-208ENST00000430547 C10orf95Q9H7T3 257 aa6.34□□□□□ -1.39
NUP50-208ENST00000430547 TMEM258P61165 79 aa6.33□□□□□ -1.4
NUP50-208ENST00000430547 LCE3AQ5TA76 89 aa6.3□□□□□ -1.4
NUP50-208ENST00000430547 UQCR11O14957 56 aa6.27□□□□□ -1.41
NUP50-208ENST00000430547 MT1LQ93083 61 aa6.25□□□□□ -1.41
NUP50-208ENST00000430547 MT1MQ8N339 61 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms