RNA–Protein interactions for RNA: ENST00000428983.2

PCDH8P1-201, Transcript of protocadherin 8 pseudogene 1, humanhuman

BASIC

Gene PCDH8P1, Length 2,773 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8P1-201ENST00000428983 TNXBP22105 4242 aa9.02□□□□□ -0.97
PCDH8P1-201ENST00000428983 KIAA1109Q2LD37 5005 aa9.01□□□□□ -0.97
PCDH8P1-201ENST00000428983 H1FX-AS1Q4G0G2 97 aa9□□□□□ -0.97
PCDH8P1-201ENST00000428983 A0A0A0MQY5 61 aa8.99□□□□□ -0.97
PCDH8P1-201ENST00000428983 KRTAP17-1Q9BYP8 105 aa8.95□□□□□ -0.98
PCDH8P1-201ENST00000428983 RPS29P62273 56 aaKnown RBP8.94□□□□□ -0.98
PCDH8P1-201ENST00000428983 C20orf166-AS1Q96NR2 134 aa8.9□□□□□ -0.98
PCDH8P1-201ENST00000428983 RYR1P21817 5038 aa8.9□□□□□ -0.98
PCDH8P1-201ENST00000428983 COX6B2Q6YFQ2 88 aa8.88□□□□□ -0.99
PCDH8P1-201ENST00000428983 LPAP08519 4548 aa8.87□□□□□ -0.99
PCDH8P1-201ENST00000428983 Q5VSD8 79 aa8.86□□□□□ -0.99
PCDH8P1-201ENST00000428983 EPPK1P58107 5090 aaKnown RBP8.86□□□□□ -0.99
PCDH8P1-201ENST00000428983 P0C880 135 aa8.83□□□□□ -1
PCDH8P1-201ENST00000428983 K7ERS5 55 aa8.77□□□□□ -1.01
PCDH8P1-201ENST00000428983 A0A0D9SG42 100 aa8.74□□□□□ -1.01
PCDH8P1-201ENST00000428983 KRTAP10-8P60410 259 aa8.74□□□□□ -1.01
PCDH8P1-201ENST00000428983 LRP2P98164 4655 aa8.74□□□□□ -1.01
PCDH8P1-201ENST00000428983 KRTAP13-4Q3LI77 160 aa8.73□□□□□ -1.01
PCDH8P1-201ENST00000428983 ABCA13Q86UQ4 5058 aa8.72□□□□□ -1.01
PCDH8P1-201ENST00000428983 KRTAP10-6P60371 365 aaPredicted RBP8.69□□□□□ -1.02
PCDH8P1-201ENST00000428983 KRTAP3-3Q9BYR6 98 aa8.66□□□□□ -1.02
PCDH8P1-201ENST00000428983 RPL37P61927 97 aaKnown RBP8.64□□□□□ -1.03
PCDH8P1-201ENST00000428983 TPRXLQ17RH7 258 aa8.64□□□□□ -1.03
PCDH8P1-201ENST00000428983 XP32Q5T750 250 aa8.63□□□□□ -1.03
PCDH8P1-201ENST00000428983 C10orf95Q9H7T3 257 aa8.63□□□□□ -1.03
PCDH8P1-201ENST00000428983 KRTAP3-2Q9BYR7 98 aa8.6□□□□□ -1.03
PCDH8P1-201ENST00000428983 MT1HL1P0DM35 61 aa8.58□□□□□ -1.04
PCDH8P1-201ENST00000428983 SPINT4Q6UDR6 99 aa8.55□□□□□ -1.04
PCDH8P1-201ENST00000428983 NDUFAF8A1L188 74 aa8.52□□□□□ -1.05
PCDH8P1-201ENST00000428983 KRTAP4-5Q9BYR2 181 aa8.52□□□□□ -1.05
PCDH8P1-201ENST00000428983 KRTAP12-2P59991 146 aa8.45□□□□□ -1.06
PCDH8P1-201ENST00000428983 S4R3F8 94 aa8.45□□□□□ -1.06
PCDH8P1-201ENST00000428983 KRTAP15-1Q3LI76 137 aa8.34□□□□□ -1.07
PCDH8P1-201ENST00000428983 MUC2Q02817 5179 aa8.33□□□□□ -1.08
PCDH8P1-201ENST00000428983 KRTAP12-1P59990 96 aa8.31□□□□□ -1.08
PCDH8P1-201ENST00000428983 HERC2O95714 4834 aa8.29□□□□□ -1.08
PCDH8P1-201ENST00000428983 LUZP6Q538Z0 58 aa8.21□□□□□ -1.1
PCDH8P1-201ENST00000428983 MUC17Q685J3 4493 aa8.16□□□□□ -1.1
PCDH8P1-201ENST00000428983 KRTAP4-1Q9BYQ7 146 aa8.09□□□□□ -1.11
PCDH8P1-201ENST00000428983 HERC1Q15751 4861 aa8.08□□□□□ -1.12
PCDH8P1-201ENST00000428983 J3QL48 77 aa8.05□□□□□ -1.12
PCDH8P1-201ENST00000428983 M0QZ58 72 aa8.05□□□□□ -1.12
PCDH8P1-201ENST00000428983 PCLOQ9Y6V0 5065 aa7.98□□□□□ -1.13
PCDH8P1-201ENST00000428983 LORP23490 312 aaPredicted RBP7.95□□□□□ -1.14
PCDH8P1-201ENST00000428983 R4GN34 69 aa7.91□□□□□ -1.14
PCDH8P1-201ENST00000428983 BIRC6Q9NR09 4857 aa7.9□□□□□ -1.14
PCDH8P1-201ENST00000428983 FAT4Q6V0I7 4981 aa7.9□□□□□ -1.14
PCDH8P1-201ENST00000428983 SEC61BP60468 96 aaKnown RBP7.9□□□□□ -1.15
PCDH8P1-201ENST00000428983 PLAC4Q8WY50 150 aa7.82□□□□□ -1.16
PCDH8P1-201ENST00000428983 RNF213Q63HN8 5207 aa7.8□□□□□ -1.16
PCDH8P1-201ENST00000428983 KRTAP19-2Q3LHN2 52 aa7.77□□□□□ -1.17
PCDH8P1-201ENST00000428983 HMCN2Q8NDA2 5059 aa7.75□□□□□ -1.17
PCDH8P1-201ENST00000428983 FLGP20930 4061 aaPredicted RBP7.68□□□□□ -1.18
PCDH8P1-201ENST00000428983 UBR4Q5T4S7 5183 aa7.66□□□□□ -1.18
PCDH8P1-201ENST00000428983 CAMK2N1Q7Z7J9 78 aa7.56□□□□□ -1.2
PCDH8P1-201ENST00000428983 PP632Q6XCG6 107 aa7.44□□□□□ -1.22
PCDH8P1-201ENST00000428983 LCE2CQ5TA81 110 aa7.39□□□□□ -1.23
PCDH8P1-201ENST00000428983 M0R2T5 61 aa7.32□□□□□ -1.24
PCDH8P1-201ENST00000428983 TNP1P09430 55 aa7.25□□□□□ -1.25
PCDH8P1-201ENST00000428983 MT1HP80294 61 aa7.2□□□□□ -1.26
PCDH8P1-201ENST00000428983 KRTAP19-1Q8IUB9 90 aa7.15□□□□□ -1.26
PCDH8P1-201ENST00000428983 SPRR5A0A1B0GTR4 108 aa7.14□□□□□ -1.27
PCDH8P1-201ENST00000428983 MT1FP04733 61 aa7.1□□□□□ -1.27
PCDH8P1-201ENST00000428983 KRTAP10-10P60014 251 aa7.1□□□□□ -1.27
PCDH8P1-201ENST00000428983 PRO2289Q9P1D8 64 aa7.08□□□□□ -1.28
PCDH8P1-201ENST00000428983 MT2AP02795 61 aa7.06□□□□□ -1.28
PCDH8P1-201ENST00000428983 SPRR2GQ9BYE4 73 aa7.04□□□□□ -1.28
PCDH8P1-201ENST00000428983 KRTAP23-1A1A580 65 aa7.03□□□□□ -1.28
PCDH8P1-201ENST00000428983 KRTAP9-8Q9BYQ0 159 aa7.01□□□□□ -1.29
PCDH8P1-201ENST00000428983 USH2AO75445 5202 aa6.96□□□□□ -1.29
PCDH8P1-201ENST00000428983 LCE3AQ5TA76 89 aa6.93□□□□□ -1.3
PCDH8P1-201ENST00000428983 MT1BP07438 61 aa6.79□□□□□ -1.32
PCDH8P1-201ENST00000428983 KMT2DO14686 5537 aa6.77□□□□□ -1.33
PCDH8P1-201ENST00000428983 KRTAP10-5P60370 271 aa6.72□□□□□ -1.33
PCDH8P1-201ENST00000428983 MT1XP80297 61 aa6.71□□□□□ -1.33
PCDH8P1-201ENST00000428983 KRTAP19-8Q3LI54 63 aa6.71□□□□□ -1.33
PCDH8P1-201ENST00000428983 INE1O15225 51 aa6.71□□□□□ -1.34
PCDH8P1-201ENST00000428983 KRTAP9-3Q9BYQ3 159 aa6.69□□□□□ -1.34
PCDH8P1-201ENST00000428983 KRTAP8-1Q8IUC2 63 aa6.63□□□□□ -1.35
PCDH8P1-201ENST00000428983 KRTAP10-7P60409 375 aaPredicted RBP6.62□□□□□ -1.35
PCDH8P1-201ENST00000428983 FSIP2Q5CZC0 6907 aa6.56□□□□□ -1.36
PCDH8P1-201ENST00000428983 LCE2BO14633 110 aa6.55□□□□□ -1.36
PCDH8P1-201ENST00000428983 KRTAP12-3P60328 96 aa6.53□□□□□ -1.36
PCDH8P1-201ENST00000428983 KRTAP10-12P60413 245 aa6.51□□□□□ -1.37
PCDH8P1-201ENST00000428983 LCE2AQ5TA79 106 aaPredicted RBP6.38□□□□□ -1.39
PCDH8P1-201ENST00000428983 KRTAP4-8A0A0G2JLE6 195 aa6.35□□□□□ -1.39
PCDH8P1-201ENST00000428983 KRTAP4-8Q9BYQ9 185 aa6.35□□□□□ -1.39
PCDH8P1-201ENST00000428983 KRTAP19-5Q3LI72 72 aa6.28□□□□□ -1.4
PCDH8P1-201ENST00000428983 SSPOA2VEC9 5147 aa6.24□□□□□ -1.41
PCDH8P1-201ENST00000428983 LCE3CQ5T5A8 94 aa6.16□□□□□ -1.42
PCDH8P1-201ENST00000428983 KRTAP9-6A8MVA2 160 aa6.1□□□□□ -1.43
PCDH8P1-201ENST00000428983 KRTAP4-7Q9BYR0 210 aa6.07□□□□□ -1.44
PCDH8P1-201ENST00000428983 KRTAP19-7Q3SYF9 63 aa5.99□□□□□ -1.45
PCDH8P1-201ENST00000428983 FCGBPQ9Y6R7 5405 aaPredicted RBP5.97□□□□□ -1.45
PCDH8P1-201ENST00000428983 MUC12Q9UKN1 5478 aa5.97□□□□□ -1.45
PCDH8P1-201ENST00000428983 DSTQ03001 7570 aaKnown RBP5.86□□□□□ -1.47
PCDH8P1-201ENST00000428983 KRTAP2-3P0C7H8 128 aa5.84□□□□□ -1.47
PCDH8P1-201ENST00000428983 KRTAP2-4Q9BYR9 128 aa5.84□□□□□ -1.47
PCDH8P1-201ENST00000428983 KRTAP2-1Q9BYU5 128 aa5.84□□□□□ -1.47
PCDH8P1-201ENST00000428983 MT1EP04732 61 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms