RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 SNURFQ9Y675 71 aa10.47□□□□□ -0.73
PTPN18-205ENST00000428843 KRTAP9-3Q9BYQ3 159 aa10.45□□□□□ -0.74
PTPN18-205ENST00000428843 DMAC1Q96GE9 116 aa10.44□□□□□ -0.74
PTPN18-205ENST00000428843 C20orf197Q8N268 126 aa10.43□□□□□ -0.74
PTPN18-205ENST00000428843 NDUFC1O43677 76 aa10.41□□□□□ -0.74
PTPN18-205ENST00000428843 COX7CP15954 63 aa10.33□□□□□ -0.76
PTPN18-205ENST00000428843 LCE2BO14633 110 aa10.31□□□□□ -0.76
PTPN18-205ENST00000428843 ACYP2P14621 99 aa10.27□□□□□ -0.77
PTPN18-205ENST00000428843 KRTAP9-6A0A140TA67 174 aa10.25□□□□□ -0.77
PTPN18-205ENST00000428843 CRCT1Q9UGL9 99 aa10.25□□□□□ -0.77
PTPN18-205ENST00000428843 SPANXA2-OT1Q8N9U9 137 aa10.24□□□□□ -0.77
PTPN18-205ENST00000428843 FSIP2Q5CZC0 6907 aa10.21□□□□□ -0.77
PTPN18-205ENST00000428843 ANAPC13Q9BS18 74 aa10.21□□□□□ -0.77
PTPN18-205ENST00000428843 H0YAA0 97 aa10.19□□□□□ -0.78
PTPN18-205ENST00000428843 USH2AO75445 5202 aa10.16□□□□□ -0.78
PTPN18-205ENST00000428843 KRTAP19-1Q8IUB9 90 aa10.12□□□□□ -0.79
PTPN18-205ENST00000428843 CYSTM1Q9H1C7 97 aa10.12□□□□□ -0.79
PTPN18-205ENST00000428843 ADM2Q7Z4H4 148 aa10.11□□□□□ -0.79
PTPN18-205ENST00000428843 CHKB-CPT1BH3BT56 60 aa10.09□□□□□ -0.79
PTPN18-205ENST00000428843 H7BZZ5 65 aa10.07□□□□□ -0.8
PTPN18-205ENST00000428843 SPTSSBQ8NFR3 76 aa10.05□□□□□ -0.8
PTPN18-205ENST00000428843 SPRR2GQ9BYE4 73 aa10.05□□□□□ -0.8
PTPN18-205ENST00000428843 CRIPTQ9P021 101 aa10.04□□□□□ -0.8
PTPN18-205ENST00000428843 CCDC179H3BU77 68 aa10□□□□□ -0.81
PTPN18-205ENST00000428843 SSPOA2VEC9 5147 aa9.97□□□□□ -0.81
PTPN18-205ENST00000428843 P0C880 135 aa9.95□□□□□ -0.82
PTPN18-205ENST00000428843 COA5Q86WW8 74 aa9.95□□□□□ -0.82
PTPN18-205ENST00000428843 KRTAP3-2Q9BYR7 98 aa9.94□□□□□ -0.82
PTPN18-205ENST00000428843 KRTAP19-8Q3LI54 63 aa9.92□□□□□ -0.82
PTPN18-205ENST00000428843 Q5VV11 94 aa9.88□□□□□ -0.83
PTPN18-205ENST00000428843 MT1BP07438 61 aa9.87□□□□□ -0.83
PTPN18-205ENST00000428843 KRTAP19-6Q3LI70 58 aa9.85□□□□□ -0.83
PTPN18-205ENST00000428843 R4GN34 69 aa9.81□□□□□ -0.84
PTPN18-205ENST00000428843 M0QZ58 72 aa9.76□□□□□ -0.85
PTPN18-205ENST00000428843 FCGBPQ9Y6R7 5405 aaPredicted RBP9.72□□□□□ -0.85
PTPN18-205ENST00000428843 ATP5EP56381 51 aaPredicted RBP9.71□□□□□ -0.86
PTPN18-205ENST00000428843 TMEM258P61165 79 aa9.63□□□□□ -0.87
PTPN18-205ENST00000428843 LINC01554Q52M75 96 aa9.6□□□□□ -0.87
PTPN18-205ENST00000428843 SEC61GP60059 68 aa9.58□□□□□ -0.88
PTPN18-205ENST00000428843 A6NN06 94 aa9.57□□□□□ -0.88
PTPN18-205ENST00000428843 SERP1Q9Y6X1 66 aa9.56□□□□□ -0.88
PTPN18-205ENST00000428843 KRTAP10-5P60370 271 aa9.54□□□□□ -0.88
PTPN18-205ENST00000428843 PLAC4Q8WY50 150 aa9.54□□□□□ -0.88
PTPN18-205ENST00000428843 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.53□□□□□ -0.88
PTPN18-205ENST00000428843 KRTAP13-4Q3LI77 160 aa9.49□□□□□ -0.89
PTPN18-205ENST00000428843 A0A1B0GU69 56 aa9.42□□□□□ -0.9
PTPN18-205ENST00000428843 A0A1B0GU33 70 aa9.39□□□□□ -0.91
PTPN18-205ENST00000428843 MT1XP80297 61 aa9.36□□□□□ -0.91
PTPN18-205ENST00000428843 PRO2289Q9P1D8 64 aa9.34□□□□□ -0.91
PTPN18-205ENST00000428843 MACF1Q9UPN3 7388 aaKnown RBP9.33□□□□□ -0.92
PTPN18-205ENST00000428843 SPATA8Q6RVD6 105 aa9.31□□□□□ -0.92
PTPN18-205ENST00000428843 LINC01558Q9Y6Z2 57 aa9.3□□□□□ -0.92
PTPN18-205ENST00000428843 PCP4P48539 62 aa9.29□□□□□ -0.92
PTPN18-205ENST00000428843 KRTAP9-7A8MTY7 169 aa9.27□□□□□ -0.93
PTPN18-205ENST00000428843 PRR15LQ9BU68 103 aa9.25□□□□□ -0.93
PTPN18-205ENST00000428843 A0A0D9SG42 100 aa9.24□□□□□ -0.93
PTPN18-205ENST00000428843 SMIM26A0A096LP01 95 aa9.11□□□□□ -0.95
PTPN18-205ENST00000428843 SYNE2Q8WXH0 6885 aaKnown RBP9.11□□□□□ -0.95
PTPN18-205ENST00000428843 CAMK2N1Q7Z7J9 78 aa9.08□□□□□ -0.96
PTPN18-205ENST00000428843 A8MU10 97 aa9.07□□□□□ -0.96
PTPN18-205ENST00000428843 SPINT4Q6UDR6 99 aa9.07□□□□□ -0.96
PTPN18-205ENST00000428843 KRTAP12-1P59990 96 aa9.06□□□□□ -0.96
PTPN18-205ENST00000428843 KRTAP6-3Q3LI67 103 aa9.05□□□□□ -0.96
PTPN18-205ENST00000428843 KRTAP12-2P59991 146 aa9.03□□□□□ -0.96
PTPN18-205ENST00000428843 V9GYY9 64 aa9.01□□□□□ -0.97
PTPN18-205ENST00000428843 Q1T7F1 81 aa8.99□□□□□ -0.97
PTPN18-205ENST00000428843 UQCR11O14957 56 aa8.97□□□□□ -0.97
PTPN18-205ENST00000428843 KRTAP10-7P60409 375 aaPredicted RBP8.95□□□□□ -0.98
PTPN18-205ENST00000428843 RPS28P62857 69 aaKnown RBP8.93□□□□□ -0.98
PTPN18-205ENST00000428843 PSPHP1O15172 72 aa8.91□□□□□ -0.98
PTPN18-205ENST00000428843 KRTAP10-12P60413 245 aa8.89□□□□□ -0.99
PTPN18-205ENST00000428843 KMT2DO14686 5537 aa8.88□□□□□ -0.99
PTPN18-205ENST00000428843 KRTAP5-9P26371 169 aa8.83□□□□□ -1
PTPN18-205ENST00000428843 KRTAP4-8A0A0G2JLE6 195 aa8.82□□□□□ -1
PTPN18-205ENST00000428843 MIR22HGQ0VDD5 57 aa8.82□□□□□ -1
PTPN18-205ENST00000428843 KRTAP4-8Q9BYQ9 185 aa8.82□□□□□ -1
PTPN18-205ENST00000428843 KRTAP8-1Q8IUC2 63 aa8.8□□□□□ -1
PTPN18-205ENST00000428843 SPRR2FQ96RM1 72 aa8.68□□□□□ -1.02
PTPN18-205ENST00000428843 MUC12Q9UKN1 5478 aa8.65□□□□□ -1.02
PTPN18-205ENST00000428843 A6NED7 52 aa8.63□□□□□ -1.03
PTPN18-205ENST00000428843 C10orf95Q9H7T3 257 aa8.63□□□□□ -1.03
PTPN18-205ENST00000428843 K7ERS5 55 aa8.54□□□□□ -1.04
PTPN18-205ENST00000428843 NEBP20929 6669 aa8.53□□□□□ -1.04
PTPN18-205ENST00000428843 TNP1P09430 55 aa8.5□□□□□ -1.05
PTPN18-205ENST00000428843 MDN1Q9NU22 5596 aa8.47□□□□□ -1.05
PTPN18-205ENST00000428843 SPRR2EP22531 72 aa8.46□□□□□ -1.06
PTPN18-205ENST00000428843 SPRR2BP35325 72 aa8.46□□□□□ -1.06
PTPN18-205ENST00000428843 SPRR2AP35326 72 aa8.46□□□□□ -1.06
PTPN18-205ENST00000428843 LCE1AQ5T7P2 110 aa8.4□□□□□ -1.06
PTPN18-205ENST00000428843 KRTAP19-7Q3SYF9 63 aa8.36□□□□□ -1.07
PTPN18-205ENST00000428843 CDC42SE1Q9NRR8 79 aa8.34□□□□□ -1.07
PTPN18-205ENST00000428843 LCE3AQ5TA76 89 aa8.32□□□□□ -1.08
PTPN18-205ENST00000428843 KRTAP19-5Q3LI72 72 aa8.28□□□□□ -1.08
PTPN18-205ENST00000428843 MT1EP04732 61 aa8.27□□□□□ -1.09
PTPN18-205ENST00000428843 KRTAP25-1Q3LHN0 102 aa8.24□□□□□ -1.09
PTPN18-205ENST00000428843 KRTAP20-1Q3LI63 56 aa8.17□□□□□ -1.1
PTPN18-205ENST00000428843 SPRR2DP22532 72 aa8.16□□□□□ -1.1
PTPN18-205ENST00000428843 KRTAP19-3Q7Z4W3 81 aa8.1□□□□□ -1.11
PTPN18-205ENST00000428843 KRTAP2-3P0C7H8 128 aa8.08□□□□□ -1.12
PTPN18-205ENST00000428843 KRTAP2-4Q9BYR9 128 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms