RNA–Protein interactions for RNA: ENST00000428494.6

GHDC-203, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-203ENST00000428494 FAT3Q8TDW7 4589 aa8.27□□□□□ -1.09
GHDC-203ENST00000428494 MYCBP2O75592 4640 aa8.26□□□□□ -1.09
GHDC-203ENST00000428494 COX6B2Q6YFQ2 88 aa8.26□□□□□ -1.09
GHDC-203ENST00000428494 A0A1B0GVY2 172 aa8.24□□□□□ -1.09
GHDC-203ENST00000428494 CRIPTQ9P021 101 aa8.22□□□□□ -1.09
GHDC-203ENST00000428494 TNXBP22105 4242 aa8.21□□□□□ -1.09
GHDC-203ENST00000428494 EPPK1P58107 5090 aaKnown RBP8.17□□□□□ -1.1
GHDC-203ENST00000428494 KRTAP3-3Q9BYR6 98 aa8.12□□□□□ -1.11
GHDC-203ENST00000428494 KRTAP10-6P60371 365 aaPredicted RBP8.1□□□□□ -1.11
GHDC-203ENST00000428494 KRTAP13-4Q3LI77 160 aa8.09□□□□□ -1.11
GHDC-203ENST00000428494 KRTAP10-8P60410 259 aa8.08□□□□□ -1.12
GHDC-203ENST00000428494 K7ERS5 55 aa8.08□□□□□ -1.12
GHDC-203ENST00000428494 A0A0D9SG42 100 aa8.07□□□□□ -1.12
GHDC-203ENST00000428494 A0A0A0MQY5 61 aa8.06□□□□□ -1.12
GHDC-203ENST00000428494 KRTAP3-2Q9BYR7 98 aa8.03□□□□□ -1.12
GHDC-203ENST00000428494 LPAP08519 4548 aa8.01□□□□□ -1.13
GHDC-203ENST00000428494 RPL37P61927 97 aaKnown RBP8□□□□□ -1.13
GHDC-203ENST00000428494 XP32Q5T750 250 aa7.99□□□□□ -1.13
GHDC-203ENST00000428494 BIRC6Q9NR09 4857 aa7.99□□□□□ -1.13
GHDC-203ENST00000428494 SPINT4Q6UDR6 99 aa7.98□□□□□ -1.13
GHDC-203ENST00000428494 NDUFAF8A1L188 74 aa7.97□□□□□ -1.13
GHDC-203ENST00000428494 S4R3F8 94 aa7.97□□□□□ -1.13
GHDC-203ENST00000428494 Q5VSD8 79 aa7.93□□□□□ -1.14
GHDC-203ENST00000428494 KRTAP15-1Q3LI76 137 aa7.92□□□□□ -1.14
GHDC-203ENST00000428494 LRP2P98164 4655 aa7.9□□□□□ -1.15
GHDC-203ENST00000428494 KRTAP17-1Q9BYP8 105 aa7.89□□□□□ -1.15
GHDC-203ENST00000428494 RYR1P21817 5038 aa7.88□□□□□ -1.15
GHDC-203ENST00000428494 TPRXLQ17RH7 258 aa7.87□□□□□ -1.15
GHDC-203ENST00000428494 KIAA1109Q2LD37 5005 aa7.85□□□□□ -1.15
GHDC-203ENST00000428494 C10orf95Q9H7T3 257 aa7.85□□□□□ -1.15
GHDC-203ENST00000428494 KRTAP12-2P59991 146 aa7.83□□□□□ -1.16
GHDC-203ENST00000428494 MT1HL1P0DM35 61 aa7.75□□□□□ -1.17
GHDC-203ENST00000428494 HERC2O95714 4834 aa7.74□□□□□ -1.17
GHDC-203ENST00000428494 KRTAP12-1P59990 96 aa7.72□□□□□ -1.17
GHDC-203ENST00000428494 ABCA13Q86UQ4 5058 aa7.69□□□□□ -1.18
GHDC-203ENST00000428494 PCLOQ9Y6V0 5065 aa7.67□□□□□ -1.18
GHDC-203ENST00000428494 KRTAP4-5Q9BYR2 181 aa7.64□□□□□ -1.19
GHDC-203ENST00000428494 LUZP6Q538Z0 58 aa7.58□□□□□ -1.2
GHDC-203ENST00000428494 M0QZ58 72 aa7.56□□□□□ -1.2
GHDC-203ENST00000428494 MUC17Q685J3 4493 aa7.45□□□□□ -1.22
GHDC-203ENST00000428494 R4GN34 69 aa7.44□□□□□ -1.22
GHDC-203ENST00000428494 LORP23490 312 aaPredicted RBP7.42□□□□□ -1.22
GHDC-203ENST00000428494 KRTAP4-1Q9BYQ7 146 aa7.33□□□□□ -1.24
GHDC-203ENST00000428494 HERC1Q15751 4861 aa7.32□□□□□ -1.24
GHDC-203ENST00000428494 MUC2Q02817 5179 aa7.31□□□□□ -1.24
GHDC-203ENST00000428494 J3QL48 77 aa7.28□□□□□ -1.24
GHDC-203ENST00000428494 SEC61BP60468 96 aaKnown RBP7.25□□□□□ -1.25
GHDC-203ENST00000428494 PLAC4Q8WY50 150 aa7.18□□□□□ -1.26
GHDC-203ENST00000428494 KRTAP19-2Q3LHN2 52 aa7.16□□□□□ -1.26
GHDC-203ENST00000428494 CAMK2N1Q7Z7J9 78 aa7.08□□□□□ -1.28
GHDC-203ENST00000428494 FLGP20930 4061 aaPredicted RBP7.07□□□□□ -1.28
GHDC-203ENST00000428494 HMCN2Q8NDA2 5059 aa7□□□□□ -1.29
GHDC-203ENST00000428494 UBR4Q5T4S7 5183 aa6.93□□□□□ -1.3
GHDC-203ENST00000428494 FAT4Q6V0I7 4981 aa6.92□□□□□ -1.3
GHDC-203ENST00000428494 PP632Q6XCG6 107 aa6.91□□□□□ -1.3
GHDC-203ENST00000428494 RNF213Q63HN8 5207 aa6.79□□□□□ -1.32
GHDC-203ENST00000428494 TNP1P09430 55 aa6.79□□□□□ -1.32
GHDC-203ENST00000428494 LCE2CQ5TA81 110 aa6.68□□□□□ -1.34
GHDC-203ENST00000428494 PRO2289Q9P1D8 64 aa6.67□□□□□ -1.34
GHDC-203ENST00000428494 SPRR5A0A1B0GTR4 108 aa6.62□□□□□ -1.35
GHDC-203ENST00000428494 KRTAP19-1Q8IUB9 90 aa6.62□□□□□ -1.35
GHDC-203ENST00000428494 KRTAP23-1A1A580 65 aa6.61□□□□□ -1.35
GHDC-203ENST00000428494 SPRR2GQ9BYE4 73 aa6.59□□□□□ -1.35
GHDC-203ENST00000428494 M0R2T5 61 aa6.55□□□□□ -1.36
GHDC-203ENST00000428494 LCE3AQ5TA76 89 aa6.49□□□□□ -1.37
GHDC-203ENST00000428494 MT1HP80294 61 aa6.47□□□□□ -1.37
GHDC-203ENST00000428494 MT1FP04733 61 aa6.44□□□□□ -1.38
GHDC-203ENST00000428494 KRTAP10-10P60014 251 aa6.44□□□□□ -1.38
GHDC-203ENST00000428494 INE1O15225 51 aa6.42□□□□□ -1.38
GHDC-203ENST00000428494 MT2AP02795 61 aa6.41□□□□□ -1.38
GHDC-203ENST00000428494 KRTAP9-8Q9BYQ0 159 aa6.36□□□□□ -1.39
GHDC-203ENST00000428494 KRTAP10-5P60370 271 aa6.25□□□□□ -1.41
GHDC-203ENST00000428494 KRTAP19-8Q3LI54 63 aa6.25□□□□□ -1.41
GHDC-203ENST00000428494 MT1BP07438 61 aa6.24□□□□□ -1.41
GHDC-203ENST00000428494 KRTAP8-1Q8IUC2 63 aa6.24□□□□□ -1.41
GHDC-203ENST00000428494 MT1XP80297 61 aa6.24□□□□□ -1.41
GHDC-203ENST00000428494 LCE2AQ5TA79 106 aaPredicted RBP6.19□□□□□ -1.42
GHDC-203ENST00000428494 KRTAP12-3P60328 96 aa6.14□□□□□ -1.43
GHDC-203ENST00000428494 KRTAP10-12P60413 245 aa6.13□□□□□ -1.43
GHDC-203ENST00000428494 KRTAP10-7P60409 375 aaPredicted RBP6.13□□□□□ -1.43
GHDC-203ENST00000428494 KRTAP9-3Q9BYQ3 159 aa6.06□□□□□ -1.44
GHDC-203ENST00000428494 USH2AO75445 5202 aa6.03□□□□□ -1.44
GHDC-203ENST00000428494 KMT2DO14686 5537 aa6.02□□□□□ -1.45
GHDC-203ENST00000428494 KRTAP9-2Q9BYQ4 174 aa5.99□□□□□ -1.45
GHDC-203ENST00000428494 FSIP2Q5CZC0 6907 aa5.91□□□□□ -1.46
GHDC-203ENST00000428494 KRTAP19-5Q3LI72 72 aa5.87□□□□□ -1.47
GHDC-203ENST00000428494 LCE2BO14633 110 aa5.85□□□□□ -1.47
GHDC-203ENST00000428494 LCE2DQ5TA82 110 aaPredicted RBP5.8□□□□□ -1.48
GHDC-203ENST00000428494 LCE3CQ5T5A8 94 aa5.78□□□□□ -1.48
GHDC-203ENST00000428494 KRTAP4-8A0A0G2JLE6 195 aa5.77□□□□□ -1.49
GHDC-203ENST00000428494 KRTAP4-8Q9BYQ9 185 aa5.77□□□□□ -1.49
GHDC-203ENST00000428494 KRTAP9-6A0A140TA67 174 aa5.74□□□□□ -1.49
GHDC-203ENST00000428494 KRTAP9-6A8MVA2 160 aa5.68□□□□□ -1.5
GHDC-203ENST00000428494 CRCT1Q9UGL9 99 aa5.67□□□□□ -1.5
GHDC-203ENST00000428494 KRTAP4-7Q9BYR0 210 aa5.62□□□□□ -1.51
GHDC-203ENST00000428494 KRTAP19-7Q3SYF9 63 aa5.56□□□□□ -1.52
GHDC-203ENST00000428494 SSPOA2VEC9 5147 aa5.51□□□□□ -1.53
GHDC-203ENST00000428494 KRTAP2-3P0C7H8 128 aa5.42□□□□□ -1.54
GHDC-203ENST00000428494 KRTAP2-4Q9BYR9 128 aa5.42□□□□□ -1.54
GHDC-203ENST00000428494 KRTAP2-1Q9BYU5 128 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms