RNA–Protein interactions for RNA: ENST00000428120.5

FAAP20-209, Transcript of FA core complex associated protein 20, humanhuman

TSL 1 (best)

Gene FAAP20, Length 2,313 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-209ENST00000428120 A0A1B0GU69 56 aa11.94□□□□□ -0.5
FAAP20-209ENST00000428120 SPTSSBQ8NFR3 76 aa11.85□□□□□ -0.51
FAAP20-209ENST00000428120 LCA10Q71F78 164 aa11.83□□□□□ -0.52
FAAP20-209ENST00000428120 PCLOQ9Y6V0 5065 aa11.82□□□□□ -0.52
FAAP20-209ENST00000428120 CDC42SE1Q9NRR8 79 aa11.72□□□□□ -0.53
FAAP20-209ENST00000428120 SEC61GP60059 68 aa11.71□□□□□ -0.53
FAAP20-209ENST00000428120 HERC1Q15751 4861 aa11.7□□□□□ -0.54
FAAP20-209ENST00000428120 KRTAP3-3Q9BYR6 98 aa11.68□□□□□ -0.54
FAAP20-209ENST00000428120 S4R3F8 94 aa11.66□□□□□ -0.54
FAAP20-209ENST00000428120 SEC61BP60468 96 aaKnown RBP11.64□□□□□ -0.55
FAAP20-209ENST00000428120 H1FX-AS1Q4G0G2 97 aa11.61□□□□□ -0.55
FAAP20-209ENST00000428120 UQCR11O14957 56 aa11.61□□□□□ -0.55
FAAP20-209ENST00000428120 RBM12B-AS1Q9P1G2 102 aa11.61□□□□□ -0.55
FAAP20-209ENST00000428120 MUC17Q685J3 4493 aa11.6□□□□□ -0.55
FAAP20-209ENST00000428120 MIR22HGQ0VDD5 57 aa11.55□□□□□ -0.56
FAAP20-209ENST00000428120 KRTAP4-1Q9BYQ7 146 aa11.55□□□□□ -0.56
FAAP20-209ENST00000428120 SPATA8Q6RVD6 105 aa11.52□□□□□ -0.57
FAAP20-209ENST00000428120 HMCN2Q8NDA2 5059 aa11.49□□□□□ -0.57
FAAP20-209ENST00000428120 MUC2Q02817 5179 aa11.49□□□□□ -0.57
FAAP20-209ENST00000428120 PMAIP1Q13794 54 aa11.47□□□□□ -0.57
FAAP20-209ENST00000428120 A0A1B0GU33 70 aa11.46□□□□□ -0.58
FAAP20-209ENST00000428120 H0YAA0 97 aa11.4□□□□□ -0.58
FAAP20-209ENST00000428120 KRTAP10-6P60371 365 aaPredicted RBP11.37□□□□□ -0.59
FAAP20-209ENST00000428120 KRTAP3-2Q9BYR7 98 aa11.35□□□□□ -0.59
FAAP20-209ENST00000428120 CSAG1Q6PB30 78 aa11.32□□□□□ -0.6
FAAP20-209ENST00000428120 A6NN06 94 aa11.31□□□□□ -0.6
FAAP20-209ENST00000428120 P0C880 135 aa11.29□□□□□ -0.6
FAAP20-209ENST00000428120 ADM2Q7Z4H4 148 aa11.25□□□□□ -0.61
FAAP20-209ENST00000428120 KRTAP19-2Q3LHN2 52 aa11.22□□□□□ -0.61
FAAP20-209ENST00000428120 KRTAP13-4Q3LI77 160 aa11.19□□□□□ -0.62
FAAP20-209ENST00000428120 FLGP20930 4061 aaPredicted RBP11.09□□□□□ -0.63
FAAP20-209ENST00000428120 UBR4Q5T4S7 5183 aa11.09□□□□□ -0.63
FAAP20-209ENST00000428120 A0A0D9SG42 100 aa11.07□□□□□ -0.64
FAAP20-209ENST00000428120 KTN1-AS1Q86SY8 53 aa11.04□□□□□ -0.64
FAAP20-209ENST00000428120 RNF213Q63HN8 5207 aa10.99□□□□□ -0.65
FAAP20-209ENST00000428120 FAT4Q6V0I7 4981 aa10.96□□□□□ -0.65
FAAP20-209ENST00000428120 K7ERS5 55 aa10.88□□□□□ -0.67
FAAP20-209ENST00000428120 M0QZ58 72 aa10.85□□□□□ -0.67
FAAP20-209ENST00000428120 LORP23490 312 aaPredicted RBP10.84□□□□□ -0.67
FAAP20-209ENST00000428120 LCE2CQ5TA81 110 aa10.82□□□□□ -0.68
FAAP20-209ENST00000428120 PRAC1Q96KF2 57 aa10.81□□□□□ -0.68
FAAP20-209ENST00000428120 R4GN34 69 aa10.8□□□□□ -0.68
FAAP20-209ENST00000428120 KRTAP12-2P59991 146 aa10.77□□□□□ -0.69
FAAP20-209ENST00000428120 LINC01554Q52M75 96 aa10.76□□□□□ -0.69
FAAP20-209ENST00000428120 SPINT4Q6UDR6 99 aa10.73□□□□□ -0.69
FAAP20-209ENST00000428120 KRTAP12-1P59990 96 aa10.71□□□□□ -0.69
FAAP20-209ENST00000428120 M0R2T5 61 aa10.58□□□□□ -0.72
FAAP20-209ENST00000428120 MT1HP80294 61 aa10.58□□□□□ -0.72
FAAP20-209ENST00000428120 ROMO1P60602 79 aa10.55□□□□□ -0.72
FAAP20-209ENST00000428120 CRIPTQ9P021 101 aa10.47□□□□□ -0.73
FAAP20-209ENST00000428120 KRTAP25-1Q3LHN0 102 aa10.32□□□□□ -0.76
FAAP20-209ENST00000428120 MT2AP02795 61 aa10.25□□□□□ -0.77
FAAP20-209ENST00000428120 MT1FP04733 61 aa10.24□□□□□ -0.77
FAAP20-209ENST00000428120 KRTAP9-8Q9BYQ0 159 aa10.23□□□□□ -0.77
FAAP20-209ENST00000428120 KRTAP10-10P60014 251 aa10.22□□□□□ -0.77
FAAP20-209ENST00000428120 C10orf95Q9H7T3 257 aa10.2□□□□□ -0.78
FAAP20-209ENST00000428120 CAMK2N1Q7Z7J9 78 aa10.18□□□□□ -0.78
FAAP20-209ENST00000428120 KRTAP19-1Q8IUB9 90 aa10.18□□□□□ -0.78
FAAP20-209ENST00000428120 SPRR2GQ9BYE4 73 aa10.17□□□□□ -0.78
FAAP20-209ENST00000428120 H3BS24 57 aa9.99□□□□□ -0.81
FAAP20-209ENST00000428120 PLAC4Q8WY50 150 aa9.95□□□□□ -0.82
FAAP20-209ENST00000428120 LCE2AQ5TA79 106 aaPredicted RBP9.83□□□□□ -0.84
FAAP20-209ENST00000428120 KRTAP9-3Q9BYQ3 159 aa9.83□□□□□ -0.84
FAAP20-209ENST00000428120 KRTAP19-8Q3LI54 63 aa9.81□□□□□ -0.84
FAAP20-209ENST00000428120 MT1BP07438 61 aa9.74□□□□□ -0.85
FAAP20-209ENST00000428120 TNP1P09430 55 aa9.68□□□□□ -0.86
FAAP20-209ENST00000428120 LCE2BO14633 110 aa9.56□□□□□ -0.88
FAAP20-209ENST00000428120 USH2AO75445 5202 aa9.55□□□□□ -0.88
FAAP20-209ENST00000428120 MT1XP80297 61 aa9.53□□□□□ -0.88
FAAP20-209ENST00000428120 KRTAP10-5P60370 271 aa9.52□□□□□ -0.89
FAAP20-209ENST00000428120 PP632Q6XCG6 107 aa9.51□□□□□ -0.89
FAAP20-209ENST00000428120 KRTAP23-1A1A580 65 aa9.33□□□□□ -0.92
FAAP20-209ENST00000428120 LCE3AQ5TA76 89 aa9.3□□□□□ -0.92
FAAP20-209ENST00000428120 PRO2289Q9P1D8 64 aa9.26□□□□□ -0.93
FAAP20-209ENST00000428120 KRTAP15-1Q3LI76 137 aa9.25□□□□□ -0.93
FAAP20-209ENST00000428120 KRTAP10-7P60409 375 aaPredicted RBP9.22□□□□□ -0.93
FAAP20-209ENST00000428120 KRTAP10-12P60413 245 aa9.15□□□□□ -0.95
FAAP20-209ENST00000428120 FSIP2Q5CZC0 6907 aa9.07□□□□□ -0.96
FAAP20-209ENST00000428120 KMT2DO14686 5537 aa9.05□□□□□ -0.96
FAAP20-209ENST00000428120 SSPOA2VEC9 5147 aa9.03□□□□□ -0.96
FAAP20-209ENST00000428120 KRTAP8-1Q8IUC2 63 aa9.01□□□□□ -0.97
FAAP20-209ENST00000428120 KRTAP12-3P60328 96 aa8.87□□□□□ -0.99
FAAP20-209ENST00000428120 KRTAP4-8A0A0G2JLE6 195 aa8.82□□□□□ -1
FAAP20-209ENST00000428120 KRTAP4-8Q9BYQ9 185 aa8.82□□□□□ -1
FAAP20-209ENST00000428120 NDUFAF8A1L188 74 aa8.79□□□□□ -1
FAAP20-209ENST00000428120 A0A0A0MQY5 61 aa8.76□□□□□ -1.01
FAAP20-209ENST00000428120 KRTAP19-6Q3LI70 58 aa8.75□□□□□ -1.01
FAAP20-209ENST00000428120 KRTAP19-5Q3LI72 72 aa8.73□□□□□ -1.01
FAAP20-209ENST00000428120 LCE2DQ5TA82 110 aaPredicted RBP8.67□□□□□ -1.02
FAAP20-209ENST00000428120 SPRR5A0A1B0GTR4 108 aa8.64□□□□□ -1.03
FAAP20-209ENST00000428120 LUZP6Q538Z0 58 aa8.57□□□□□ -1.04
FAAP20-209ENST00000428120 FCGBPQ9Y6R7 5405 aaPredicted RBP8.56□□□□□ -1.04
FAAP20-209ENST00000428120 KRTAP19-7Q3SYF9 63 aa8.49□□□□□ -1.05
FAAP20-209ENST00000428120 MT1EP04732 61 aa8.3□□□□□ -1.08
FAAP20-209ENST00000428120 LCE3CQ5T5A8 94 aa8.3□□□□□ -1.08
FAAP20-209ENST00000428120 KRTAP9-2Q9BYQ4 174 aa8.28□□□□□ -1.08
FAAP20-209ENST00000428120 MACF1Q9UPN3 7388 aaKnown RBP8.22□□□□□ -1.09
FAAP20-209ENST00000428120 MT1LQ93083 61 aa8.19□□□□□ -1.1
FAAP20-209ENST00000428120 MUC12Q9UKN1 5478 aa8.19□□□□□ -1.1
FAAP20-209ENST00000428120 KRTAP4-7Q9BYR0 210 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms