RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 Q1T7F1 81 aa9.02□□□□□ -0.97
AC055811.2-201ENST00000427497 RBM12B-AS1Q9P1G2 102 aa9.02□□□□□ -0.97
AC055811.2-201ENST00000427497 H1FX-AS1Q4G0G2 97 aa8.97□□□□□ -0.97
AC055811.2-201ENST00000427497 LCE2CQ5TA81 110 aa8.97□□□□□ -0.97
AC055811.2-201ENST00000427497 V9GYY9 64 aa8.97□□□□□ -0.97
AC055811.2-201ENST00000427497 KRTAP19-2Q3LHN2 52 aa8.94□□□□□ -0.98
AC055811.2-201ENST00000427497 LINC01558Q9Y6Z2 57 aa8.93□□□□□ -0.98
AC055811.2-201ENST00000427497 SPTSSBQ8NFR3 76 aa8.92□□□□□ -0.98
AC055811.2-201ENST00000427497 S4R3F8 94 aa8.9□□□□□ -0.98
AC055811.2-201ENST00000427497 LCA10Q71F78 164 aa8.89□□□□□ -0.99
AC055811.2-201ENST00000427497 KRTAP3-3Q9BYR6 98 aa8.89□□□□□ -0.99
AC055811.2-201ENST00000427497 KRTAP9-6A0A140TA67 174 aa8.86□□□□□ -0.99
AC055811.2-201ENST00000427497 MT1HP80294 61 aa8.85□□□□□ -0.99
AC055811.2-201ENST00000427497 PSPHP1O15172 72 aa8.83□□□□□ -1
AC055811.2-201ENST00000427497 LCE2DQ5TA82 110 aaPredicted RBP8.83□□□□□ -1
AC055811.2-201ENST00000427497 PRR15LQ9BU68 103 aa8.82□□□□□ -1
AC055811.2-201ENST00000427497 Q5VV11 94 aa8.78□□□□□ -1
AC055811.2-201ENST00000427497 A0A1B0GU69 56 aa8.75□□□□□ -1.01
AC055811.2-201ENST00000427497 LORP23490 312 aaPredicted RBP8.7□□□□□ -1.02
AC055811.2-201ENST00000427497 KRTAP10-6P60371 365 aaPredicted RBP8.69□□□□□ -1.02
AC055811.2-201ENST00000427497 CSAG1Q6PB30 78 aa8.69□□□□□ -1.02
AC055811.2-201ENST00000427497 FLGP20930 4061 aaPredicted RBP8.69□□□□□ -1.02
AC055811.2-201ENST00000427497 M0R2T5 61 aa8.68□□□□□ -1.02
AC055811.2-201ENST00000427497 SEC61GP60059 68 aa8.68□□□□□ -1.02
AC055811.2-201ENST00000427497 FSIP2Q5CZC0 6907 aa8.67□□□□□ -1.02
AC055811.2-201ENST00000427497 CRCT1Q9UGL9 99 aa8.63□□□□□ -1.03
AC055811.2-201ENST00000427497 KRTAP3-2Q9BYR7 98 aa8.59□□□□□ -1.03
AC055811.2-201ENST00000427497 A6NED7 52 aa8.55□□□□□ -1.04
AC055811.2-201ENST00000427497 H0YAA0 97 aa8.55□□□□□ -1.04
AC055811.2-201ENST00000427497 ADM2Q7Z4H4 148 aa8.5□□□□□ -1.05
AC055811.2-201ENST00000427497 UQCR11O14957 56 aa8.49□□□□□ -1.05
AC055811.2-201ENST00000427497 A0A1B0GU33 70 aa8.49□□□□□ -1.05
AC055811.2-201ENST00000427497 P0C880 135 aa8.49□□□□□ -1.05
AC055811.2-201ENST00000427497 BRK1Q8WUW1 75 aa8.48□□□□□ -1.05
AC055811.2-201ENST00000427497 CDC42SE1Q9NRR8 79 aa8.43□□□□□ -1.06
AC055811.2-201ENST00000427497 SPATA8Q6RVD6 105 aa8.42□□□□□ -1.06
AC055811.2-201ENST00000427497 A8MU10 97 aa8.4□□□□□ -1.06
AC055811.2-201ENST00000427497 MIR22HGQ0VDD5 57 aa8.4□□□□□ -1.06
AC055811.2-201ENST00000427497 KRTAP9-8Q9BYQ0 159 aa8.37□□□□□ -1.07
AC055811.2-201ENST00000427497 KRTAP13-4Q3LI77 160 aa8.34□□□□□ -1.08
AC055811.2-201ENST00000427497 PRO0628Q9UI54 55 aa8.33□□□□□ -1.08
AC055811.2-201ENST00000427497 M0QZ58 72 aa8.27□□□□□ -1.09
AC055811.2-201ENST00000427497 MT2AP02795 61 aa8.24□□□□□ -1.09
AC055811.2-201ENST00000427497 USH2AO75445 5202 aa8.21□□□□□ -1.1
AC055811.2-201ENST00000427497 SVIPQ8NHG7 77 aa8.19□□□□□ -1.1
AC055811.2-201ENST00000427497 R4GN34 69 aa8.19□□□□□ -1.1
AC055811.2-201ENST00000427497 MT1FP04733 61 aa8.18□□□□□ -1.1
AC055811.2-201ENST00000427497 CRIPTQ9P021 101 aa8.14□□□□□ -1.11
AC055811.2-201ENST00000427497 SSPOA2VEC9 5147 aa8.13□□□□□ -1.11
AC055811.2-201ENST00000427497 A0A0D9SG42 100 aa8.13□□□□□ -1.11
AC055811.2-201ENST00000427497 KRTAP10-10P60014 251 aa8.12□□□□□ -1.11
AC055811.2-201ENST00000427497 KRTAP9-3Q9BYQ3 159 aa8.11□□□□□ -1.11
AC055811.2-201ENST00000427497 LCE2BO14633 110 aa8.09□□□□□ -1.11
AC055811.2-201ENST00000427497 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.04□□□□□ -1.12
AC055811.2-201ENST00000427497 LINC01554Q52M75 96 aa8.02□□□□□ -1.13
AC055811.2-201ENST00000427497 KRTAP12-1P59990 96 aa8.02□□□□□ -1.13
AC055811.2-201ENST00000427497 PMAIP1Q13794 54 aa8.02□□□□□ -1.13
AC055811.2-201ENST00000427497 A6NN06 94 aa8.01□□□□□ -1.13
AC055811.2-201ENST00000427497 FCGBPQ9Y6R7 5405 aaPredicted RBP7.99□□□□□ -1.13
AC055811.2-201ENST00000427497 K7ERS5 55 aa7.99□□□□□ -1.13
AC055811.2-201ENST00000427497 SPRR2GQ9BYE4 73 aa7.99□□□□□ -1.13
AC055811.2-201ENST00000427497 KRTAP12-2P59991 146 aa7.98□□□□□ -1.13
AC055811.2-201ENST00000427497 KRTAP19-1Q8IUB9 90 aa7.98□□□□□ -1.13
AC055811.2-201ENST00000427497 KRTAP9-7A8MTY7 169 aa7.96□□□□□ -1.13
AC055811.2-201ENST00000427497 SPINT4Q6UDR6 99 aa7.93□□□□□ -1.14
AC055811.2-201ENST00000427497 KRTAP19-6Q3LI70 58 aa7.83□□□□□ -1.16
AC055811.2-201ENST00000427497 KRTAP19-8Q3LI54 63 aa7.79□□□□□ -1.16
AC055811.2-201ENST00000427497 MACF1Q9UPN3 7388 aaKnown RBP7.74□□□□□ -1.17
AC055811.2-201ENST00000427497 KTN1-AS1Q86SY8 53 aa7.7□□□□□ -1.18
AC055811.2-201ENST00000427497 ROMO1P60602 79 aa7.7□□□□□ -1.18
AC055811.2-201ENST00000427497 PLAC4Q8WY50 150 aa7.68□□□□□ -1.18
AC055811.2-201ENST00000427497 MT1BP07438 61 aa7.67□□□□□ -1.18
AC055811.2-201ENST00000427497 CAMK2N1Q7Z7J9 78 aa7.67□□□□□ -1.18
AC055811.2-201ENST00000427497 SYNE2Q8WXH0 6885 aaKnown RBP7.66□□□□□ -1.18
AC055811.2-201ENST00000427497 C10orf95Q9H7T3 257 aa7.58□□□□□ -1.2
AC055811.2-201ENST00000427497 PRAC1Q96KF2 57 aa7.51□□□□□ -1.21
AC055811.2-201ENST00000427497 KRTAP6-3Q3LI67 103 aa7.48□□□□□ -1.21
AC055811.2-201ENST00000427497 MT1XP80297 61 aa7.43□□□□□ -1.22
AC055811.2-201ENST00000427497 KRTAP10-5P60370 271 aa7.41□□□□□ -1.22
AC055811.2-201ENST00000427497 KRTAP25-1Q3LHN0 102 aa7.38□□□□□ -1.23
AC055811.2-201ENST00000427497 TNP1P09430 55 aa7.32□□□□□ -1.24
AC055811.2-201ENST00000427497 PRO2289Q9P1D8 64 aa7.3□□□□□ -1.24
AC055811.2-201ENST00000427497 MUC12Q9UKN1 5478 aa7.2□□□□□ -1.26
AC055811.2-201ENST00000427497 NEBP20929 6669 aa7.19□□□□□ -1.26
AC055811.2-201ENST00000427497 KRTAP23-1A1A580 65 aa7.14□□□□□ -1.27
AC055811.2-201ENST00000427497 PP632Q6XCG6 107 aa7.12□□□□□ -1.27
AC055811.2-201ENST00000427497 KRTAP5-9P26371 169 aa7.12□□□□□ -1.27
AC055811.2-201ENST00000427497 KRTAP10-7P60409 375 aaPredicted RBP7.12□□□□□ -1.27
AC055811.2-201ENST00000427497 KMT2DO14686 5537 aa7.05□□□□□ -1.28
AC055811.2-201ENST00000427497 KRTAP10-12P60413 245 aa7.04□□□□□ -1.28
AC055811.2-201ENST00000427497 LCE3AQ5TA76 89 aa7.03□□□□□ -1.28
AC055811.2-201ENST00000427497 MDN1Q9NU22 5596 aa7□□□□□ -1.29
AC055811.2-201ENST00000427497 KRTAP20-1Q3LI63 56 aa6.97□□□□□ -1.29
AC055811.2-201ENST00000427497 KRTAP8-1Q8IUC2 63 aa6.9□□□□□ -1.3
AC055811.2-201ENST00000427497 SPRR2FQ96RM1 72 aa6.87□□□□□ -1.31
AC055811.2-201ENST00000427497 KRTAP4-8A0A0G2JLE6 195 aa6.83□□□□□ -1.32
AC055811.2-201ENST00000427497 KRTAP4-8Q9BYQ9 185 aa6.83□□□□□ -1.32
AC055811.2-201ENST00000427497 SPRR2EP22531 72 aa6.8□□□□□ -1.32
AC055811.2-201ENST00000427497 SPRR2BP35325 72 aa6.8□□□□□ -1.32
AC055811.2-201ENST00000427497 SPRR2AP35326 72 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms