RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 H1FX-AS1Q4G0G2 97 aa13.36□□□□□ -0.27
SH3GL3-202ENST00000427482 KRTAP4-1Q9BYQ7 146 aa13.33□□□□□ -0.28
SH3GL3-202ENST00000427482 S4R3F8 94 aa13.33□□□□□ -0.28
SH3GL3-202ENST00000427482 HERC1Q15751 4861 aa13.32□□□□□ -0.28
SH3GL3-202ENST00000427482 LCA10Q71F78 164 aa13.32□□□□□ -0.28
SH3GL3-202ENST00000427482 KRTAP3-3Q9BYR6 98 aa13.31□□□□□ -0.28
SH3GL3-202ENST00000427482 BRK1Q8WUW1 75 aa13.3□□□□□ -0.28
SH3GL3-202ENST00000427482 HMCN2Q8NDA2 5059 aa13.26□□□□□ -0.29
SH3GL3-202ENST00000427482 A6NED7 52 aa13.25□□□□□ -0.29
SH3GL3-202ENST00000427482 SEC61GP60059 68 aa13.21□□□□□ -0.29
SH3GL3-202ENST00000427482 PRO0628Q9UI54 55 aa13.13□□□□□ -0.31
SH3GL3-202ENST00000427482 A8MU10 97 aa13.06□□□□□ -0.32
SH3GL3-202ENST00000427482 CDC42SE1Q9NRR8 79 aa13.06□□□□□ -0.32
SH3GL3-202ENST00000427482 KRTAP19-2Q3LHN2 52 aa13.03□□□□□ -0.32
SH3GL3-202ENST00000427482 UQCR11O14957 56 aa13.02□□□□□ -0.32
SH3GL3-202ENST00000427482 CSAG1Q6PB30 78 aa12.98□□□□□ -0.33
SH3GL3-202ENST00000427482 SPATA8Q6RVD6 105 aa12.92□□□□□ -0.34
SH3GL3-202ENST00000427482 MIR22HGQ0VDD5 57 aa12.91□□□□□ -0.34
SH3GL3-202ENST00000427482 A0A1B0GU33 70 aa12.9□□□□□ -0.34
SH3GL3-202ENST00000427482 KRTAP10-6P60371 365 aaPredicted RBP12.9□□□□□ -0.34
SH3GL3-202ENST00000427482 KRTAP3-2Q9BYR7 98 aa12.9□□□□□ -0.34
SH3GL3-202ENST00000427482 MUC2Q02817 5179 aa12.79□□□□□ -0.36
SH3GL3-202ENST00000427482 H0YAA0 97 aa12.78□□□□□ -0.36
SH3GL3-202ENST00000427482 ADM2Q7Z4H4 148 aa12.77□□□□□ -0.37
SH3GL3-202ENST00000427482 P0C880 135 aa12.76□□□□□ -0.37
SH3GL3-202ENST00000427482 FLGP20930 4061 aaPredicted RBP12.69□□□□□ -0.38
SH3GL3-202ENST00000427482 SVIPQ8NHG7 77 aa12.67□□□□□ -0.38
SH3GL3-202ENST00000427482 LCE2CQ5TA81 110 aa12.6□□□□□ -0.39
SH3GL3-202ENST00000427482 RNF213Q63HN8 5207 aa12.6□□□□□ -0.39
SH3GL3-202ENST00000427482 KRTAP13-4Q3LI77 160 aa12.6□□□□□ -0.39
SH3GL3-202ENST00000427482 UBR4Q5T4S7 5183 aa12.58□□□□□ -0.4
SH3GL3-202ENST00000427482 PMAIP1Q13794 54 aa12.56□□□□□ -0.4
SH3GL3-202ENST00000427482 A6NN06 94 aa12.49□□□□□ -0.41
SH3GL3-202ENST00000427482 M0QZ58 72 aa12.42□□□□□ -0.42
SH3GL3-202ENST00000427482 A0A0D9SG42 100 aa12.36□□□□□ -0.43
SH3GL3-202ENST00000427482 MT1HP80294 61 aa12.32□□□□□ -0.44
SH3GL3-202ENST00000427482 LORP23490 312 aaPredicted RBP12.3□□□□□ -0.44
SH3GL3-202ENST00000427482 R4GN34 69 aa12.28□□□□□ -0.44
SH3GL3-202ENST00000427482 FAT4Q6V0I7 4981 aa12.27□□□□□ -0.45
SH3GL3-202ENST00000427482 K7ERS5 55 aa12.25□□□□□ -0.45
SH3GL3-202ENST00000427482 M0R2T5 61 aa12.2□□□□□ -0.46
SH3GL3-202ENST00000427482 KTN1-AS1Q86SY8 53 aa12.14□□□□□ -0.47
SH3GL3-202ENST00000427482 KRTAP12-1P59990 96 aa12.11□□□□□ -0.47
SH3GL3-202ENST00000427482 KRTAP12-2P59991 146 aa12.11□□□□□ -0.47
SH3GL3-202ENST00000427482 LINC01554Q52M75 96 aa12.08□□□□□ -0.48
SH3GL3-202ENST00000427482 CRIPTQ9P021 101 aa12.07□□□□□ -0.48
SH3GL3-202ENST00000427482 SPINT4Q6UDR6 99 aa12.04□□□□□ -0.48
SH3GL3-202ENST00000427482 KRTAP9-8Q9BYQ0 159 aa11.91□□□□□ -0.5
SH3GL3-202ENST00000427482 MT2AP02795 61 aa11.9□□□□□ -0.5
SH3GL3-202ENST00000427482 MT1FP04733 61 aa11.85□□□□□ -0.51
SH3GL3-202ENST00000427482 ROMO1P60602 79 aa11.81□□□□□ -0.52
SH3GL3-202ENST00000427482 KRTAP10-10P60014 251 aa11.8□□□□□ -0.52
SH3GL3-202ENST00000427482 SPRR2GQ9BYE4 73 aa11.79□□□□□ -0.52
SH3GL3-202ENST00000427482 PRAC1Q96KF2 57 aa11.79□□□□□ -0.52
SH3GL3-202ENST00000427482 KRTAP19-1Q8IUB9 90 aa11.74□□□□□ -0.53
SH3GL3-202ENST00000427482 LCE2AQ5TA79 106 aaPredicted RBP11.65□□□□□ -0.55
SH3GL3-202ENST00000427482 CAMK2N1Q7Z7J9 78 aa11.53□□□□□ -0.56
SH3GL3-202ENST00000427482 KRTAP9-3Q9BYQ3 159 aa11.46□□□□□ -0.57
SH3GL3-202ENST00000427482 C10orf95Q9H7T3 257 aa11.46□□□□□ -0.58
SH3GL3-202ENST00000427482 KRTAP19-8Q3LI54 63 aa11.44□□□□□ -0.58
SH3GL3-202ENST00000427482 KRTAP25-1Q3LHN0 102 aa11.43□□□□□ -0.58
SH3GL3-202ENST00000427482 PLAC4Q8WY50 150 aa11.43□□□□□ -0.58
SH3GL3-202ENST00000427482 MT1BP07438 61 aa11.28□□□□□ -0.6
SH3GL3-202ENST00000427482 LCE2BO14633 110 aa11.12□□□□□ -0.63
SH3GL3-202ENST00000427482 TNP1P09430 55 aa11.02□□□□□ -0.64
SH3GL3-202ENST00000427482 MT1XP80297 61 aa10.98□□□□□ -0.65
SH3GL3-202ENST00000427482 KRTAP10-5P60370 271 aa10.96□□□□□ -0.65
SH3GL3-202ENST00000427482 PP632Q6XCG6 107 aa10.84□□□□□ -0.67
SH3GL3-202ENST00000427482 PRO2289Q9P1D8 64 aa10.77□□□□□ -0.68
SH3GL3-202ENST00000427482 KRTAP23-1A1A580 65 aa10.77□□□□□ -0.69
SH3GL3-202ENST00000427482 USH2AO75445 5202 aa10.72□□□□□ -0.69
SH3GL3-202ENST00000427482 KRTAP10-7P60409 375 aaPredicted RBP10.55□□□□□ -0.72
SH3GL3-202ENST00000427482 LCE3AQ5TA76 89 aa10.54□□□□□ -0.72
SH3GL3-202ENST00000427482 KRTAP10-12P60413 245 aa10.49□□□□□ -0.73
SH3GL3-202ENST00000427482 LCE2DQ5TA82 110 aaPredicted RBP10.46□□□□□ -0.74
SH3GL3-202ENST00000427482 SSPOA2VEC9 5147 aa10.4□□□□□ -0.74
SH3GL3-202ENST00000427482 KRTAP19-6Q3LI70 58 aa10.35□□□□□ -0.75
SH3GL3-202ENST00000427482 KRTAP8-1Q8IUC2 63 aa10.33□□□□□ -0.76
SH3GL3-202ENST00000427482 KRTAP15-1Q3LI76 137 aa10.19□□□□□ -0.78
SH3GL3-202ENST00000427482 KRTAP12-3P60328 96 aa10.1□□□□□ -0.79
SH3GL3-202ENST00000427482 KRTAP4-8A0A0G2JLE6 195 aa10.07□□□□□ -0.8
SH3GL3-202ENST00000427482 KRTAP4-8Q9BYQ9 185 aa10.07□□□□□ -0.8
SH3GL3-202ENST00000427482 FSIP2Q5CZC0 6907 aa10.05□□□□□ -0.8
SH3GL3-202ENST00000427482 KRTAP19-5Q3LI72 72 aa9.97□□□□□ -0.81
SH3GL3-202ENST00000427482 KMT2DO14686 5537 aa9.96□□□□□ -0.81
SH3GL3-202ENST00000427482 KRTAP9-2Q9BYQ4 174 aa9.91□□□□□ -0.82
SH3GL3-202ENST00000427482 FCGBPQ9Y6R7 5405 aaPredicted RBP9.84□□□□□ -0.83
SH3GL3-202ENST00000427482 KRTAP19-7Q3SYF9 63 aa9.79□□□□□ -0.84
SH3GL3-202ENST00000427482 SPRR5A0A1B0GTR4 108 aa9.75□□□□□ -0.85
SH3GL3-202ENST00000427482 MT1EP04732 61 aa9.59□□□□□ -0.87
SH3GL3-202ENST00000427482 CRCT1Q9UGL9 99 aa9.59□□□□□ -0.87
SH3GL3-202ENST00000427482 NDUFAF8A1L188 74 aa9.49□□□□□ -0.89
SH3GL3-202ENST00000427482 LUZP6Q538Z0 58 aa9.49□□□□□ -0.89
SH3GL3-202ENST00000427482 LCE3CQ5T5A8 94 aa9.45□□□□□ -0.9
SH3GL3-202ENST00000427482 MT1LQ93083 61 aa9.44□□□□□ -0.9
SH3GL3-202ENST00000427482 KRTAP19-4Q3LI73 84 aa9.38□□□□□ -0.91
SH3GL3-202ENST00000427482 MACF1Q9UPN3 7388 aaKnown RBP9.26□□□□□ -0.93
SH3GL3-202ENST00000427482 SPRR2FQ96RM1 72 aa9.22□□□□□ -0.93
SH3GL3-202ENST00000427482 KRTAP4-7Q9BYR0 210 aa9.2□□□□□ -0.94
SH3GL3-202ENST00000427482 KRTAP19-3Q7Z4W3 81 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms