RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 A8MUN3 132 aa11.77□□□□□ -0.53
HERPUD2-205ENST00000427455 SMIM20Q8N5G0 67 aa11.76□□□□□ -0.53
HERPUD2-205ENST00000427455 KRTAP3-3Q9BYR6 98 aa11.73□□□□□ -0.53
HERPUD2-205ENST00000427455 LCE2BO14633 110 aa11.72□□□□□ -0.53
HERPUD2-205ENST00000427455 TRAV7A0A075B6U4 112 aa11.71□□□□□ -0.53
HERPUD2-205ENST00000427455 NDUFC1O43677 76 aa11.61□□□□□ -0.55
HERPUD2-205ENST00000427455 SSPOA2VEC9 5147 aa11.6□□□□□ -0.55
HERPUD2-205ENST00000427455 DMAC1Q96GE9 116 aa11.55□□□□□ -0.56
HERPUD2-205ENST00000427455 SERP2Q8N6R1 65 aa11.46□□□□□ -0.57
HERPUD2-205ENST00000427455 H0YAA0 97 aa11.42□□□□□ -0.58
HERPUD2-205ENST00000427455 KRTAP19-1Q8IUB9 90 aa11.42□□□□□ -0.58
HERPUD2-205ENST00000427455 SNURFQ9Y675 71 aa11.42□□□□□ -0.58
HERPUD2-205ENST00000427455 C20orf197Q8N268 126 aa11.37□□□□□ -0.59
HERPUD2-205ENST00000427455 SPRR2GQ9BYE4 73 aa11.35□□□□□ -0.59
HERPUD2-205ENST00000427455 CRIPTQ9P021 101 aa11.33□□□□□ -0.6
HERPUD2-205ENST00000427455 ACYP2P14621 99 aa11.32□□□□□ -0.6
HERPUD2-205ENST00000427455 ADM2Q7Z4H4 148 aa11.28□□□□□ -0.6
HERPUD2-205ENST00000427455 KRTAP19-6Q3LI70 58 aa11.27□□□□□ -0.61
HERPUD2-205ENST00000427455 FCGBPQ9Y6R7 5405 aaPredicted RBP11.26□□□□□ -0.61
HERPUD2-205ENST00000427455 SPANXA2-OT1Q8N9U9 137 aa11.25□□□□□ -0.61
HERPUD2-205ENST00000427455 KRTAP19-8Q3LI54 63 aa11.22□□□□□ -0.61
HERPUD2-205ENST00000427455 COX7CP15954 63 aa11.2□□□□□ -0.62
HERPUD2-205ENST00000427455 Q5VV11 94 aa11.19□□□□□ -0.62
HERPUD2-205ENST00000427455 MT1BP07438 61 aa11.16□□□□□ -0.62
HERPUD2-205ENST00000427455 CHKB-CPT1BH3BT56 60 aa11.14□□□□□ -0.63
HERPUD2-205ENST00000427455 SPTSSBQ8NFR3 76 aa11.14□□□□□ -0.63
HERPUD2-205ENST00000427455 P0C880 135 aa11.07□□□□□ -0.64
HERPUD2-205ENST00000427455 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.04□□□□□ -0.64
HERPUD2-205ENST00000427455 KRTAP3-2Q9BYR7 98 aa11.04□□□□□ -0.64
HERPUD2-205ENST00000427455 ANAPC13Q9BS18 74 aa11□□□□□ -0.65
HERPUD2-205ENST00000427455 R4GN34 69 aa10.99□□□□□ -0.65
HERPUD2-205ENST00000427455 H7BZZ5 65 aa10.95□□□□□ -0.66
HERPUD2-205ENST00000427455 CYSTM1Q9H1C7 97 aa10.95□□□□□ -0.66
HERPUD2-205ENST00000427455 M0QZ58 72 aa10.91□□□□□ -0.66
HERPUD2-205ENST00000427455 A6NN06 94 aa10.9□□□□□ -0.66
HERPUD2-205ENST00000427455 COA5Q86WW8 74 aa10.9□□□□□ -0.66
HERPUD2-205ENST00000427455 MACF1Q9UPN3 7388 aaKnown RBP10.86□□□□□ -0.67
HERPUD2-205ENST00000427455 KRTAP10-5P60370 271 aa10.83□□□□□ -0.68
HERPUD2-205ENST00000427455 KRTAP9-7A8MTY7 169 aa10.79□□□□□ -0.68
HERPUD2-205ENST00000427455 CCDC179H3BU77 68 aa10.75□□□□□ -0.69
HERPUD2-205ENST00000427455 PLAC4Q8WY50 150 aa10.73□□□□□ -0.69
HERPUD2-205ENST00000427455 LINC01554Q52M75 96 aa10.72□□□□□ -0.69
HERPUD2-205ENST00000427455 SYNE2Q8WXH0 6885 aaKnown RBP10.68□□□□□ -0.7
HERPUD2-205ENST00000427455 PRO2289Q9P1D8 64 aa10.6□□□□□ -0.71
HERPUD2-205ENST00000427455 SEC61GP60059 68 aa10.58□□□□□ -0.72
HERPUD2-205ENST00000427455 ATP5EP56381 51 aaPredicted RBP10.57□□□□□ -0.72
HERPUD2-205ENST00000427455 MT1XP80297 61 aa10.56□□□□□ -0.72
HERPUD2-205ENST00000427455 SERP1Q9Y6X1 66 aa10.54□□□□□ -0.72
HERPUD2-205ENST00000427455 KRTAP13-4Q3LI77 160 aa10.49□□□□□ -0.73
HERPUD2-205ENST00000427455 KRTAP6-3Q3LI67 103 aa10.46□□□□□ -0.73
HERPUD2-205ENST00000427455 TMEM258P61165 79 aa10.41□□□□□ -0.74
HERPUD2-205ENST00000427455 A0A1B0GU33 70 aa10.34□□□□□ -0.75
HERPUD2-205ENST00000427455 A0A1B0GU69 56 aa10.34□□□□□ -0.75
HERPUD2-205ENST00000427455 SPATA8Q6RVD6 105 aa10.26□□□□□ -0.77
HERPUD2-205ENST00000427455 KRTAP12-2P59991 146 aa10.25□□□□□ -0.77
HERPUD2-205ENST00000427455 A0A0D9SG42 100 aa10.22□□□□□ -0.77
HERPUD2-205ENST00000427455 KMT2DO14686 5537 aa10.17□□□□□ -0.78
HERPUD2-205ENST00000427455 CAMK2N1Q7Z7J9 78 aa10.16□□□□□ -0.78
HERPUD2-205ENST00000427455 KRTAP5-9P26371 169 aa10.15□□□□□ -0.78
HERPUD2-205ENST00000427455 PRR15LQ9BU68 103 aa10.15□□□□□ -0.78
HERPUD2-205ENST00000427455 LINC01558Q9Y6Z2 57 aa10.12□□□□□ -0.79
HERPUD2-205ENST00000427455 MUC12Q9UKN1 5478 aa10.09□□□□□ -0.79
HERPUD2-205ENST00000427455 SMIM26A0A096LP01 95 aa10.07□□□□□ -0.8
HERPUD2-205ENST00000427455 KRTAP10-7P60409 375 aaPredicted RBP10.07□□□□□ -0.8
HERPUD2-205ENST00000427455 KRTAP10-12P60413 245 aa10.04□□□□□ -0.8
HERPUD2-205ENST00000427455 SPINT4Q6UDR6 99 aa10.04□□□□□ -0.8
HERPUD2-205ENST00000427455 KRTAP12-1P59990 96 aa10.03□□□□□ -0.8
HERPUD2-205ENST00000427455 NEBP20929 6669 aa10.02□□□□□ -0.81
HERPUD2-205ENST00000427455 KRTAP8-1Q8IUC2 63 aa10.02□□□□□ -0.81
HERPUD2-205ENST00000427455 A8MU10 97 aa9.96□□□□□ -0.82
HERPUD2-205ENST00000427455 KRTAP4-8A0A0G2JLE6 195 aa9.95□□□□□ -0.82
HERPUD2-205ENST00000427455 KRTAP4-8Q9BYQ9 185 aa9.95□□□□□ -0.82
HERPUD2-205ENST00000427455 SPRR2FQ96RM1 72 aa9.93□□□□□ -0.82
HERPUD2-205ENST00000427455 MDN1Q9NU22 5596 aa9.9□□□□□ -0.83
HERPUD2-205ENST00000427455 UQCR11O14957 56 aa9.82□□□□□ -0.84
HERPUD2-205ENST00000427455 V9GYY9 64 aa9.78□□□□□ -0.84
HERPUD2-205ENST00000427455 PCP4P48539 62 aa9.77□□□□□ -0.85
HERPUD2-205ENST00000427455 Q1T7F1 81 aa9.71□□□□□ -0.86
HERPUD2-205ENST00000427455 SPRR2EP22531 72 aa9.69□□□□□ -0.86
HERPUD2-205ENST00000427455 SPRR2BP35325 72 aa9.69□□□□□ -0.86
HERPUD2-205ENST00000427455 SPRR2AP35326 72 aa9.69□□□□□ -0.86
HERPUD2-205ENST00000427455 PSPHP1O15172 72 aa9.64□□□□□ -0.87
HERPUD2-205ENST00000427455 MIR22HGQ0VDD5 57 aa9.62□□□□□ -0.87
HERPUD2-205ENST00000427455 LCE1AQ5T7P2 110 aa9.61□□□□□ -0.87
HERPUD2-205ENST00000427455 C10orf95Q9H7T3 257 aa9.54□□□□□ -0.88
HERPUD2-205ENST00000427455 RPS28P62857 69 aaKnown RBP9.53□□□□□ -0.88
HERPUD2-205ENST00000427455 KRTAP20-1Q3LI63 56 aa9.5□□□□□ -0.89
HERPUD2-205ENST00000427455 TNP1P09430 55 aa9.46□□□□□ -0.9
HERPUD2-205ENST00000427455 KRTAP19-7Q3SYF9 63 aa9.43□□□□□ -0.9
HERPUD2-205ENST00000427455 K7ERS5 55 aa9.39□□□□□ -0.91
HERPUD2-205ENST00000427455 SPRR2DP22532 72 aa9.37□□□□□ -0.91
HERPUD2-205ENST00000427455 A6NED7 52 aa9.35□□□□□ -0.91
HERPUD2-205ENST00000427455 KRTAP2-3P0C7H8 128 aa9.35□□□□□ -0.91
HERPUD2-205ENST00000427455 KRTAP2-4Q9BYR9 128 aa9.35□□□□□ -0.91
HERPUD2-205ENST00000427455 MT1EP04732 61 aa9.34□□□□□ -0.91
HERPUD2-205ENST00000427455 KRTAP19-5Q3LI72 72 aa9.29□□□□□ -0.92
HERPUD2-205ENST00000427455 LCE3AQ5TA76 89 aa9.28□□□□□ -0.92
HERPUD2-205ENST00000427455 KRTAP19-3Q7Z4W3 81 aa9.18□□□□□ -0.94
HERPUD2-205ENST00000427455 LCE5AQ5TCM9 118 aa9.15□□□□□ -0.94
HERPUD2-205ENST00000427455 KRTAP25-1Q3LHN0 102 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms