RNA–Protein interactions for RNA: ENST00000427415.1

SDHAP1-204, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 1, humanhuman

TSL 4 BASIC

Gene SDHAP1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP1-204ENST00000427415 TRAV7A0A075B6U4 112 aa10.61□□□□□ -0.71
SDHAP1-204ENST00000427415 USH2AO75445 5202 aa10.54□□□□□ -0.72
SDHAP1-204ENST00000427415 KRTAP3-3Q9BYR6 98 aa10.54□□□□□ -0.72
SDHAP1-204ENST00000427415 LCE2BO14633 110 aa10.51□□□□□ -0.73
SDHAP1-204ENST00000427415 NDUFC1O43677 76 aa10.5□□□□□ -0.73
SDHAP1-204ENST00000427415 DMAC1Q96GE9 116 aa10.43□□□□□ -0.74
SDHAP1-204ENST00000427415 SERP2Q8N6R1 65 aa10.38□□□□□ -0.75
SDHAP1-204ENST00000427415 SSPOA2VEC9 5147 aa10.36□□□□□ -0.75
SDHAP1-204ENST00000427415 SNURFQ9Y675 71 aa10.33□□□□□ -0.76
SDHAP1-204ENST00000427415 H0YAA0 97 aa10.3□□□□□ -0.76
SDHAP1-204ENST00000427415 C20orf197Q8N268 126 aa10.3□□□□□ -0.76
SDHAP1-204ENST00000427415 ACYP2P14621 99 aa10.26□□□□□ -0.77
SDHAP1-204ENST00000427415 KRTAP19-1Q8IUB9 90 aa10.26□□□□□ -0.77
SDHAP1-204ENST00000427415 CRIPTQ9P021 101 aa10.22□□□□□ -0.77
SDHAP1-204ENST00000427415 SPRR2GQ9BYE4 73 aa10.21□□□□□ -0.77
SDHAP1-204ENST00000427415 ADM2Q7Z4H4 148 aa10.19□□□□□ -0.78
SDHAP1-204ENST00000427415 SPANXA2-OT1Q8N9U9 137 aa10.18□□□□□ -0.78
SDHAP1-204ENST00000427415 COX7CP15954 63 aa10.15□□□□□ -0.78
SDHAP1-204ENST00000427415 SPTSSBQ8NFR3 76 aa10.12□□□□□ -0.79
SDHAP1-204ENST00000427415 FCGBPQ9Y6R7 5405 aaPredicted RBP10.11□□□□□ -0.79
SDHAP1-204ENST00000427415 KRTAP19-6Q3LI70 58 aa10.11□□□□□ -0.79
SDHAP1-204ENST00000427415 CHKB-CPT1BH3BT56 60 aa10.1□□□□□ -0.79
SDHAP1-204ENST00000427415 Q5VV11 94 aa10.09□□□□□ -0.79
SDHAP1-204ENST00000427415 KRTAP19-8Q3LI54 63 aa10.08□□□□□ -0.8
SDHAP1-204ENST00000427415 MT1BP07438 61 aa10.01□□□□□ -0.81
SDHAP1-204ENST00000427415 ANAPC13Q9BS18 74 aa10□□□□□ -0.81
SDHAP1-204ENST00000427415 P0C880 135 aa9.97□□□□□ -0.81
SDHAP1-204ENST00000427415 R4GN34 69 aa9.93□□□□□ -0.82
SDHAP1-204ENST00000427415 KRTAP3-2Q9BYR7 98 aa9.92□□□□□ -0.82
SDHAP1-204ENST00000427415 H7BZZ5 65 aa9.9□□□□□ -0.82
SDHAP1-204ENST00000427415 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.89□□□□□ -0.83
SDHAP1-204ENST00000427415 CYSTM1Q9H1C7 97 aa9.88□□□□□ -0.83
SDHAP1-204ENST00000427415 COA5Q86WW8 74 aa9.86□□□□□ -0.83
SDHAP1-204ENST00000427415 M0QZ58 72 aa9.85□□□□□ -0.83
SDHAP1-204ENST00000427415 A6NN06 94 aa9.82□□□□□ -0.84
SDHAP1-204ENST00000427415 MACF1Q9UPN3 7388 aaKnown RBP9.76□□□□□ -0.85
SDHAP1-204ENST00000427415 CCDC179H3BU77 68 aa9.73□□□□□ -0.85
SDHAP1-204ENST00000427415 KRTAP10-5P60370 271 aa9.73□□□□□ -0.85
SDHAP1-204ENST00000427415 PLAC4Q8WY50 150 aa9.71□□□□□ -0.86
SDHAP1-204ENST00000427415 LINC01554Q52M75 96 aa9.69□□□□□ -0.86
SDHAP1-204ENST00000427415 KRTAP9-7A8MTY7 169 aa9.68□□□□□ -0.86
SDHAP1-204ENST00000427415 SEC61GP60059 68 aa9.61□□□□□ -0.87
SDHAP1-204ENST00000427415 ATP5EP56381 51 aaPredicted RBP9.59□□□□□ -0.87
SDHAP1-204ENST00000427415 SYNE2Q8WXH0 6885 aaKnown RBP9.58□□□□□ -0.88
SDHAP1-204ENST00000427415 PRO2289Q9P1D8 64 aa9.58□□□□□ -0.88
SDHAP1-204ENST00000427415 SERP1Q9Y6X1 66 aa9.57□□□□□ -0.88
SDHAP1-204ENST00000427415 MT1XP80297 61 aa9.48□□□□□ -0.89
SDHAP1-204ENST00000427415 TMEM258P61165 79 aa9.45□□□□□ -0.9
SDHAP1-204ENST00000427415 KRTAP13-4Q3LI77 160 aa9.45□□□□□ -0.9
SDHAP1-204ENST00000427415 A0A1B0GU69 56 aa9.38□□□□□ -0.91
SDHAP1-204ENST00000427415 KRTAP6-3Q3LI67 103 aa9.38□□□□□ -0.91
SDHAP1-204ENST00000427415 A0A1B0GU33 70 aa9.37□□□□□ -0.91
SDHAP1-204ENST00000427415 SPATA8Q6RVD6 105 aa9.27□□□□□ -0.93
SDHAP1-204ENST00000427415 A0A0D9SG42 100 aa9.24□□□□□ -0.93
SDHAP1-204ENST00000427415 PRR15LQ9BU68 103 aa9.23□□□□□ -0.93
SDHAP1-204ENST00000427415 KRTAP12-2P59991 146 aa9.22□□□□□ -0.93
SDHAP1-204ENST00000427415 CAMK2N1Q7Z7J9 78 aa9.2□□□□□ -0.94
SDHAP1-204ENST00000427415 LINC01558Q9Y6Z2 57 aa9.17□□□□□ -0.94
SDHAP1-204ENST00000427415 SMIM26A0A096LP01 95 aa9.13□□□□□ -0.95
SDHAP1-204ENST00000427415 KMT2DO14686 5537 aa9.13□□□□□ -0.95
SDHAP1-204ENST00000427415 KRTAP5-9P26371 169 aa9.1□□□□□ -0.95
SDHAP1-204ENST00000427415 SPINT4Q6UDR6 99 aa9.1□□□□□ -0.95
SDHAP1-204ENST00000427415 KRTAP10-7P60409 375 aaPredicted RBP9.05□□□□□ -0.96
SDHAP1-204ENST00000427415 MUC12Q9UKN1 5478 aa9.05□□□□□ -0.96
SDHAP1-204ENST00000427415 KRTAP12-1P59990 96 aa9.04□□□□□ -0.96
SDHAP1-204ENST00000427415 KRTAP10-12P60413 245 aa9.02□□□□□ -0.97
SDHAP1-204ENST00000427415 KRTAP8-1Q8IUC2 63 aa9.02□□□□□ -0.97
SDHAP1-204ENST00000427415 NEBP20929 6669 aa9□□□□□ -0.97
SDHAP1-204ENST00000427415 A8MU10 97 aa8.99□□□□□ -0.97
SDHAP1-204ENST00000427415 KRTAP4-8A0A0G2JLE6 195 aa8.92□□□□□ -0.98
SDHAP1-204ENST00000427415 SPRR2FQ96RM1 72 aa8.92□□□□□ -0.98
SDHAP1-204ENST00000427415 KRTAP4-8Q9BYQ9 185 aa8.92□□□□□ -0.98
SDHAP1-204ENST00000427415 UQCR11O14957 56 aa8.91□□□□□ -0.98
SDHAP1-204ENST00000427415 PCP4P48539 62 aa8.89□□□□□ -0.99
SDHAP1-204ENST00000427415 V9GYY9 64 aa8.89□□□□□ -0.99
SDHAP1-204ENST00000427415 MDN1Q9NU22 5596 aa8.88□□□□□ -0.99
SDHAP1-204ENST00000427415 Q1T7F1 81 aa8.8□□□□□ -1
SDHAP1-204ENST00000427415 PSPHP1O15172 72 aa8.74□□□□□ -1.01
SDHAP1-204ENST00000427415 SPRR2EP22531 72 aa8.72□□□□□ -1.01
SDHAP1-204ENST00000427415 SPRR2BP35325 72 aa8.72□□□□□ -1.01
SDHAP1-204ENST00000427415 SPRR2AP35326 72 aa8.72□□□□□ -1.01
SDHAP1-204ENST00000427415 MIR22HGQ0VDD5 57 aa8.72□□□□□ -1.01
SDHAP1-204ENST00000427415 RPS28P62857 69 aaKnown RBP8.66□□□□□ -1.02
SDHAP1-204ENST00000427415 LCE1AQ5T7P2 110 aa8.62□□□□□ -1.03
SDHAP1-204ENST00000427415 C10orf95Q9H7T3 257 aa8.6□□□□□ -1.03
SDHAP1-204ENST00000427415 TNP1P09430 55 aa8.57□□□□□ -1.04
SDHAP1-204ENST00000427415 K7ERS5 55 aa8.55□□□□□ -1.04
SDHAP1-204ENST00000427415 KRTAP20-1Q3LI63 56 aa8.53□□□□□ -1.04
SDHAP1-204ENST00000427415 A6NED7 52 aa8.5□□□□□ -1.05
SDHAP1-204ENST00000427415 KRTAP19-7Q3SYF9 63 aa8.46□□□□□ -1.06
SDHAP1-204ENST00000427415 SPRR2DP22532 72 aa8.42□□□□□ -1.06
SDHAP1-204ENST00000427415 KRTAP2-3P0C7H8 128 aa8.4□□□□□ -1.06
SDHAP1-204ENST00000427415 KRTAP2-4Q9BYR9 128 aa8.4□□□□□ -1.06
SDHAP1-204ENST00000427415 MT1EP04732 61 aa8.39□□□□□ -1.07
SDHAP1-204ENST00000427415 LCE3AQ5TA76 89 aa8.36□□□□□ -1.07
SDHAP1-204ENST00000427415 KRTAP19-5Q3LI72 72 aa8.35□□□□□ -1.07
SDHAP1-204ENST00000427415 KRTAP25-1Q3LHN0 102 aa8.27□□□□□ -1.09
SDHAP1-204ENST00000427415 KRTAP19-3Q7Z4W3 81 aa8.26□□□□□ -1.09
SDHAP1-204ENST00000427415 LCE5AQ5TCM9 118 aa8.21□□□□□ -1.1
SDHAP1-204ENST00000427415 CDC42SE1Q9NRR8 79 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 1429.1 ms