RNA–Protein interactions for RNA: ENST00000426981.5

LIMS2-211, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 1,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-211ENST00000426981 TYMSOSQ8TAI1 123 aa9.92□□□□□ -0.82
LIMS2-211ENST00000426981 RNF213Q63HN8 5207 aa9.91□□□□□ -0.82
LIMS2-211ENST00000426981 C4orf48Q5BLP8 95 aa9.9□□□□□ -0.82
LIMS2-211ENST00000426981 IGKV2D-30A0A075B6S6 120 aa9.9□□□□□ -0.83
LIMS2-211ENST00000426981 RPS29P62273 56 aaKnown RBP9.89□□□□□ -0.83
LIMS2-211ENST00000426981 SPINK1P00995 79 aa9.87□□□□□ -0.83
LIMS2-211ENST00000426981 MIR22HGQ0VDD5 57 aa9.86□□□□□ -0.83
LIMS2-211ENST00000426981 RETNLBQ9BQ08 111 aa9.81□□□□□ -0.84
LIMS2-211ENST00000426981 LINC00304Q8N9R0 145 aa9.8□□□□□ -0.84
LIMS2-211ENST00000426981 MUC2Q02817 5179 aa9.61□□□□□ -0.87
LIMS2-211ENST00000426981 TPRXLQ17RH7 258 aa9.56□□□□□ -0.88
LIMS2-211ENST00000426981 C20orf166-AS1Q96NR2 134 aa9.56□□□□□ -0.88
LIMS2-211ENST00000426981 A8MUU9 505 aa9.56□□□□□ -0.88
LIMS2-211ENST00000426981 LINC01554Q52M75 96 aa9.56□□□□□ -0.88
LIMS2-211ENST00000426981 MUC17Q685J3 4493 aa9.55□□□□□ -0.88
LIMS2-211ENST00000426981 PRAC1Q96KF2 57 aa9.51□□□□□ -0.89
LIMS2-211ENST00000426981 A0A1B0GU33 70 aa9.42□□□□□ -0.9
LIMS2-211ENST00000426981 ADM2Q7Z4H4 148 aa9.41□□□□□ -0.9
LIMS2-211ENST00000426981 FAT4Q6V0I7 4981 aa9.39□□□□□ -0.91
LIMS2-211ENST00000426981 K7ERS5 55 aa9.39□□□□□ -0.91
LIMS2-211ENST00000426981 H1FX-AS1Q4G0G2 97 aa9.38□□□□□ -0.91
LIMS2-211ENST00000426981 KRTAP4-1Q9BYQ7 146 aa9.37□□□□□ -0.91
LIMS2-211ENST00000426981 CSAG1Q6PB30 78 aa9.34□□□□□ -0.91
LIMS2-211ENST00000426981 H0YAA0 97 aa9.33□□□□□ -0.92
LIMS2-211ENST00000426981 LCE2AQ5TA79 106 aaPredicted RBP9.32□□□□□ -0.92
LIMS2-211ENST00000426981 COX6B2Q6YFQ2 88 aa9.32□□□□□ -0.92
LIMS2-211ENST00000426981 XP32Q5T750 250 aa9.31□□□□□ -0.92
LIMS2-211ENST00000426981 C9orf92A6NGG3 77 aa9.27□□□□□ -0.93
LIMS2-211ENST00000426981 KRTAP3-1Q9BYR8 98 aa9.27□□□□□ -0.93
LIMS2-211ENST00000426981 SEC61BP60468 96 aaKnown RBP9.25□□□□□ -0.93
LIMS2-211ENST00000426981 KRTAP25-1Q3LHN0 102 aa9.22□□□□□ -0.93
LIMS2-211ENST00000426981 KRTAP9-2Q9BYQ4 174 aa9.1□□□□□ -0.95
LIMS2-211ENST00000426981 LCE2CQ5TA81 110 aa9.08□□□□□ -0.96
LIMS2-211ENST00000426981 KRTAP19-2Q3LHN2 52 aa9.07□□□□□ -0.96
LIMS2-211ENST00000426981 RPL37P61927 97 aaKnown RBP9.05□□□□□ -0.96
LIMS2-211ENST00000426981 ROMO1P60602 79 aa9.04□□□□□ -0.96
LIMS2-211ENST00000426981 S4R3F8 94 aa8.96□□□□□ -0.98
LIMS2-211ENST00000426981 MT1HP80294 61 aa8.93□□□□□ -0.98
LIMS2-211ENST00000426981 KRTAP10-6P60371 365 aaPredicted RBP8.92□□□□□ -0.98
LIMS2-211ENST00000426981 KRTAP3-3Q9BYR6 98 aa8.9□□□□□ -0.98
LIMS2-211ENST00000426981 KRTAP3-2Q9BYR7 98 aa8.84□□□□□ -0.99
LIMS2-211ENST00000426981 FLGP20930 4061 aaPredicted RBP8.81□□□□□ -1
LIMS2-211ENST00000426981 H3BS24 57 aa8.78□□□□□ -1
LIMS2-211ENST00000426981 LCE2DQ5TA82 110 aaPredicted RBP8.78□□□□□ -1
LIMS2-211ENST00000426981 KRTAP9-6A0A140TA67 174 aa8.77□□□□□ -1.01
LIMS2-211ENST00000426981 LORP23490 312 aaPredicted RBP8.75□□□□□ -1.01
LIMS2-211ENST00000426981 M0QZ58 72 aa8.73□□□□□ -1.01
LIMS2-211ENST00000426981 M0R2T5 61 aa8.72□□□□□ -1.01
LIMS2-211ENST00000426981 KRTAP13-4Q3LI77 160 aa8.72□□□□□ -1.01
LIMS2-211ENST00000426981 CRIPTQ9P021 101 aa8.71□□□□□ -1.02
LIMS2-211ENST00000426981 A0A0D9SG42 100 aa8.7□□□□□ -1.02
LIMS2-211ENST00000426981 P0C880 135 aa8.63□□□□□ -1.03
LIMS2-211ENST00000426981 FSIP2Q5CZC0 6907 aa8.59□□□□□ -1.03
LIMS2-211ENST00000426981 SPINT4Q6UDR6 99 aa8.59□□□□□ -1.03
LIMS2-211ENST00000426981 CRCT1Q9UGL9 99 aa8.58□□□□□ -1.04
LIMS2-211ENST00000426981 KRTAP12-1P59990 96 aa8.54□□□□□ -1.04
LIMS2-211ENST00000426981 KRTAP12-2P59991 146 aa8.53□□□□□ -1.04
LIMS2-211ENST00000426981 KRTAP9-8Q9BYQ0 159 aa8.47□□□□□ -1.05
LIMS2-211ENST00000426981 KRTAP15-1Q3LI76 137 aa8.39□□□□□ -1.07
LIMS2-211ENST00000426981 C10orf95Q9H7T3 257 aa8.37□□□□□ -1.07
LIMS2-211ENST00000426981 MT2AP02795 61 aa8.34□□□□□ -1.07
LIMS2-211ENST00000426981 MT1FP04733 61 aa8.29□□□□□ -1.08
LIMS2-211ENST00000426981 R4GN34 69 aa8.29□□□□□ -1.08
LIMS2-211ENST00000426981 USH2AO75445 5202 aa8.21□□□□□ -1.09
LIMS2-211ENST00000426981 KRTAP10-10P60014 251 aa8.21□□□□□ -1.09
LIMS2-211ENST00000426981 LCE2BO14633 110 aa8.2□□□□□ -1.1
LIMS2-211ENST00000426981 KRTAP9-3Q9BYQ3 159 aa8.2□□□□□ -1.1
LIMS2-211ENST00000426981 PP632Q6XCG6 107 aa8.16□□□□□ -1.1
LIMS2-211ENST00000426981 SSPOA2VEC9 5147 aa8.16□□□□□ -1.1
LIMS2-211ENST00000426981 NDUFAF8A1L188 74 aa8.14□□□□□ -1.11
LIMS2-211ENST00000426981 KRTAP19-1Q8IUB9 90 aa8.03□□□□□ -1.12
LIMS2-211ENST00000426981 KRTAP9-1A8MXZ3 250 aaPredicted RBP8□□□□□ -1.13
LIMS2-211ENST00000426981 PLAC4Q8WY50 150 aa8□□□□□ -1.13
LIMS2-211ENST00000426981 FCGBPQ9Y6R7 5405 aaPredicted RBP7.96□□□□□ -1.13
LIMS2-211ENST00000426981 KRTAP23-1A1A580 65 aa7.93□□□□□ -1.14
LIMS2-211ENST00000426981 CAMK2N1Q7Z7J9 78 aa7.9□□□□□ -1.14
LIMS2-211ENST00000426981 KRTAP9-7A8MTY7 169 aa7.89□□□□□ -1.15
LIMS2-211ENST00000426981 KRTAP19-6Q3LI70 58 aa7.84□□□□□ -1.15
LIMS2-211ENST00000426981 LUZP6Q538Z0 58 aa7.82□□□□□ -1.16
LIMS2-211ENST00000426981 TNP1P09430 55 aa7.73□□□□□ -1.17
LIMS2-211ENST00000426981 MACF1Q9UPN3 7388 aaKnown RBP7.68□□□□□ -1.18
LIMS2-211ENST00000426981 MT1BP07438 61 aa7.61□□□□□ -1.19
LIMS2-211ENST00000426981 A0A0A0MQY5 61 aa7.6□□□□□ -1.19
LIMS2-211ENST00000426981 SYNE2Q8WXH0 6885 aaKnown RBP7.57□□□□□ -1.2
LIMS2-211ENST00000426981 SPRR2GQ9BYE4 73 aa7.57□□□□□ -1.2
LIMS2-211ENST00000426981 KRTAP19-8Q3LI54 63 aa7.54□□□□□ -1.2
LIMS2-211ENST00000426981 SPRR5A0A1B0GTR4 108 aa7.51□□□□□ -1.21
LIMS2-211ENST00000426981 KRTAP6-3Q3LI67 103 aa7.44□□□□□ -1.22
LIMS2-211ENST00000426981 KRTAP10-5P60370 271 aa7.39□□□□□ -1.23
LIMS2-211ENST00000426981 MUC12Q9UKN1 5478 aa7.15□□□□□ -1.27
LIMS2-211ENST00000426981 MT1XP80297 61 aa7.13□□□□□ -1.27
LIMS2-211ENST00000426981 KRTAP5-9P26371 169 aa7.1□□□□□ -1.27
LIMS2-211ENST00000426981 KRTAP8-1Q8IUC2 63 aa7.1□□□□□ -1.27
LIMS2-211ENST00000426981 NEBP20929 6669 aa7.09□□□□□ -1.27
LIMS2-211ENST00000426981 LCE3AQ5TA76 89 aa7.07□□□□□ -1.28
LIMS2-211ENST00000426981 KMT2DO14686 5537 aa7.04□□□□□ -1.28
LIMS2-211ENST00000426981 PRO2289Q9P1D8 64 aa7.01□□□□□ -1.29
LIMS2-211ENST00000426981 INE1O15225 51 aa6.95□□□□□ -1.3
LIMS2-211ENST00000426981 MDN1Q9NU22 5596 aa6.94□□□□□ -1.3
LIMS2-211ENST00000426981 SPRR2FQ96RM1 72 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms