RNA–Protein interactions for RNA: ENST00000426105.6

PUM1-206, Transcript of pumilio RNA binding family member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PUM1, Length 4,043 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-206ENST00000426105 MMP24-AS1A0A0U1RRL7 71 aa3.56□□□□□ -1.84
PUM1-206ENST00000426105 K7ERS5 55 aa3.56□□□□□ -1.84
PUM1-206ENST00000426105 UBR4Q5T4S7 5183 aa3.56□□□□□ -1.84
PUM1-206ENST00000426105 LOC101927531A0A1B0GV80 90 aa3.55□□□□□ -1.84
PUM1-206ENST00000426105 LINC01554Q52M75 96 aa3.55□□□□□ -1.84
PUM1-206ENST00000426105 FSIP2Q5CZC0 6907 aa3.54□□□□□ -1.84
PUM1-206ENST00000426105 KTN1-AS1Q86SY8 53 aa3.54□□□□□ -1.84
PUM1-206ENST00000426105 HRES1P13985 223 aa3.53□□□□□ -1.85
PUM1-206ENST00000426105 ASB16-AS1Q495Z4 193 aa3.53□□□□□ -1.85
PUM1-206ENST00000426105 Q75L30 129 aa3.53□□□□□ -1.85
PUM1-206ENST00000426105 A0A0D9SG42 100 aa3.52□□□□□ -1.85
PUM1-206ENST00000426105 Q1T7F1 81 aa3.52□□□□□ -1.85
PUM1-206ENST00000426105 CYP4F30PQ9H0H9 118 aa3.51□□□□□ -1.85
PUM1-206ENST00000426105 CRIPTQ9P021 101 aa3.5□□□□□ -1.85
PUM1-206ENST00000426105 Q5VV11 94 aa3.49□□□□□ -1.85
PUM1-206ENST00000426105 Q5W150 140 aa3.49□□□□□ -1.85
PUM1-206ENST00000426105 PRAC1Q96KF2 57 aa3.49□□□□□ -1.85
PUM1-206ENST00000426105 MIR22HGQ0VDD5 57 aa3.48□□□□□ -1.85
PUM1-206ENST00000426105 UQCR11O14957 56 aa3.48□□□□□ -1.85
PUM1-206ENST00000426105 LCA10Q71F78 164 aa3.48□□□□□ -1.85
PUM1-206ENST00000426105 KRTAP10-10P60014 251 aa3.48□□□□□ -1.85
PUM1-206ENST00000426105 SPANXA2-OT1Q8N9U9 137 aa3.47□□□□□ -1.85
PUM1-206ENST00000426105 CSAG1Q6PB30 78 aa3.46□□□□□ -1.86
PUM1-206ENST00000426105 A8MUU9 505 aa3.46□□□□□ -1.86
PUM1-206ENST00000426105 PKHD1L1Q86WI1 4243 aa3.46□□□□□ -1.86
PUM1-206ENST00000426105 S4R3F8 94 aa3.43□□□□□ -1.86
PUM1-206ENST00000426105 A6NN06 94 aa3.42□□□□□ -1.86
PUM1-206ENST00000426105 SPINT4Q6UDR6 99 aa3.42□□□□□ -1.86
PUM1-206ENST00000426105 CDC42SE1Q9NRR8 79 aa3.41□□□□□ -1.86
PUM1-206ENST00000426105 LPAP08519 4548 aa3.4□□□□□ -1.86
PUM1-206ENST00000426105 KRTAP4-1Q9BYQ7 146 aa3.4□□□□□ -1.87
PUM1-206ENST00000426105 MUC2Q02817 5179 aa3.39□□□□□ -1.87
PUM1-206ENST00000426105 H1FX-AS1Q4G0G2 97 aa3.39□□□□□ -1.87
PUM1-206ENST00000426105 KRTAP16-1A8MUX0 517 aa3.38□□□□□ -1.87
PUM1-206ENST00000426105 LINC01558Q9Y6Z2 57 aa3.38□□□□□ -1.87
PUM1-206ENST00000426105 SPATA8Q6RVD6 105 aa3.37□□□□□ -1.87
PUM1-206ENST00000426105 A0A1B0GU33 70 aa3.36□□□□□ -1.87
PUM1-206ENST00000426105 ADM2Q7Z4H4 148 aa3.36□□□□□ -1.87
PUM1-206ENST00000426105 TNXBP22105 4242 aa3.36□□□□□ -1.87
PUM1-206ENST00000426105 R4GN34 69 aa3.34□□□□□ -1.87
PUM1-206ENST00000426105 HMCN2Q8NDA2 5059 aa3.32□□□□□ -1.88
PUM1-206ENST00000426105 DMAC1Q96GE9 116 aa3.31□□□□□ -1.88
PUM1-206ENST00000426105 M0QZ58 72 aa3.3□□□□□ -1.88
PUM1-206ENST00000426105 FAT4Q6V0I7 4981 aa3.29□□□□□ -1.88
PUM1-206ENST00000426105 LOC100996750A0A140TA64 210 aa3.28□□□□□ -1.88
PUM1-206ENST00000426105 KRTAP4-6Q9BYQ5 205 aa3.28□□□□□ -1.88
PUM1-206ENST00000426105 CAMK2N1Q7Z7J9 78 aa3.28□□□□□ -1.88
PUM1-206ENST00000426105 MT1HP80294 61 aa3.25□□□□□ -1.89
PUM1-206ENST00000426105 PLAC4Q8WY50 150 aa3.23□□□□□ -1.89
PUM1-206ENST00000426105 LUZP6Q538Z0 58 aa3.23□□□□□ -1.89
PUM1-206ENST00000426105 KRTAP10-6P60371 365 aaPredicted RBP3.19□□□□□ -1.9
PUM1-206ENST00000426105 KRTAP9-2Q9BYQ4 174 aa3.18□□□□□ -1.9
PUM1-206ENST00000426105 C10orf95Q9H7T3 257 aa3.14□□□□□ -1.91
PUM1-206ENST00000426105 ROMO1P60602 79 aa3.12□□□□□ -1.91
PUM1-206ENST00000426105 P0C880 135 aa3.12□□□□□ -1.91
PUM1-206ENST00000426105 KRTAP3-1Q9BYR8 98 aa3.12□□□□□ -1.91
PUM1-206ENST00000426105 NDUFAF8A1L188 74 aa3.11□□□□□ -1.91
PUM1-206ENST00000426105 H0YAA0 97 aa3.1□□□□□ -1.91
PUM1-206ENST00000426105 MT2AP02795 61 aa3.09□□□□□ -1.91
PUM1-206ENST00000426105 MUC17Q685J3 4493 aa3.08□□□□□ -1.92
PUM1-206ENST00000426105 MT1FP04733 61 aa3.08□□□□□ -1.92
PUM1-206ENST00000426105 CRCT1Q9UGL9 99 aa3.07□□□□□ -1.92
PUM1-206ENST00000426105 KRTAP25-1Q3LHN0 102 aa3.06□□□□□ -1.92
PUM1-206ENST00000426105 KRTAP4-8Q9BYQ9 185 aa3.05□□□□□ -1.92
PUM1-206ENST00000426105 KRTAP9-6A0A140TA67 174 aa3.04□□□□□ -1.92
PUM1-206ENST00000426105 PRO2289Q9P1D8 64 aa3.02□□□□□ -1.93
PUM1-206ENST00000426105 KRTAP19-2Q3LHN2 52 aa3.01□□□□□ -1.93
PUM1-206ENST00000426105 USH2AO75445 5202 aa3□□□□□ -1.93
PUM1-206ENST00000426105 KRTAP19-4Q3LI73 84 aa2.99□□□□□ -1.93
PUM1-206ENST00000426105 KRTAP9-8Q9BYQ0 159 aa2.97□□□□□ -1.93
PUM1-206ENST00000426105 KRTAP4-12Q9BQ66 201 aa2.96□□□□□ -1.94
PUM1-206ENST00000426105 KRTAP13-4Q3LI77 160 aa2.94□□□□□ -1.94
PUM1-206ENST00000426105 KRTAP12-2P59991 146 aa2.93□□□□□ -1.94
PUM1-206ENST00000426105 KRTAP19-1Q8IUB9 90 aa2.92□□□□□ -1.94
PUM1-206ENST00000426105 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.9□□□□□ -1.94
PUM1-206ENST00000426105 FLGP20930 4061 aaPredicted RBP2.88□□□□□ -1.95
PUM1-206ENST00000426105 KRTAP9-3Q9BYQ3 159 aa2.87□□□□□ -1.95
PUM1-206ENST00000426105 LCE3BQ5TA77 95 aa2.87□□□□□ -1.95
PUM1-206ENST00000426105 KRTAP15-1Q3LI76 137 aa2.85□□□□□ -1.95
PUM1-206ENST00000426105 KRTAP12-1P59990 96 aa2.85□□□□□ -1.95
PUM1-206ENST00000426105 TNP1P09430 55 aa2.84□□□□□ -1.95
PUM1-206ENST00000426105 SPRR2FQ96RM1 72 aa2.83□□□□□ -1.96
PUM1-206ENST00000426105 KRTAP8-1Q8IUC2 63 aa2.83□□□□□ -1.96
PUM1-206ENST00000426105 SYNE2Q8WXH0 6885 aaKnown RBP2.82□□□□□ -1.96
PUM1-206ENST00000426105 KRTAP9-7A8MTY7 169 aa2.81□□□□□ -1.96
PUM1-206ENST00000426105 KRTAP9-9Q9BYP9 154 aa2.79□□□□□ -1.96
PUM1-206ENST00000426105 KRTAP9-4Q9BYQ2 154 aa2.79□□□□□ -1.96
PUM1-206ENST00000426105 KMT2DO14686 5537 aa2.79□□□□□ -1.96
PUM1-206ENST00000426105 SPRR2GQ9BYE4 73 aa2.78□□□□□ -1.96
PUM1-206ENST00000426105 KRTAP4-8A0A0G2JLE6 195 aa2.77□□□□□ -1.97
PUM1-206ENST00000426105 SSPOA2VEC9 5147 aa2.77□□□□□ -1.97
PUM1-206ENST00000426105 MT1BP07438 61 aa2.76□□□□□ -1.97
PUM1-206ENST00000426105 MACF1Q9UPN3 7388 aaKnown RBP2.75□□□□□ -1.97
PUM1-206ENST00000426105 PP632Q6XCG6 107 aa2.75□□□□□ -1.97
PUM1-206ENST00000426105 FCGBPQ9Y6R7 5405 aaPredicted RBP2.74□□□□□ -1.97
PUM1-206ENST00000426105 LCE1DQ5T752 114 aa2.74□□□□□ -1.97
PUM1-206ENST00000426105 DSTQ03001 7570 aaKnown RBP2.73□□□□□ -1.97
PUM1-206ENST00000426105 KRTAP23-1A1A580 65 aa2.71□□□□□ -1.97
PUM1-206ENST00000426105 KRTAP10-12P60413 245 aa2.71□□□□□ -1.98
PUM1-206ENST00000426105 OBSCNQ5VST9 7968 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms