RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 LCA10Q71F78 164 aa9.03□□□□□ -0.96
FN1-208ENST00000426059 KTN1-AS1Q86SY8 53 aa8.99□□□□□ -0.97
FN1-208ENST00000426059 ACYP2P14621 99 aa8.99□□□□□ -0.97
FN1-208ENST00000426059 KRTAP3-1Q9BYR8 98 aa8.97□□□□□ -0.97
FN1-208ENST00000426059 CDC42SE1Q9NRR8 79 aa8.95□□□□□ -0.98
FN1-208ENST00000426059 LINC01558Q9Y6Z2 57 aa8.95□□□□□ -0.98
FN1-208ENST00000426059 HMCN2Q8NDA2 5059 aa8.92□□□□□ -0.98
FN1-208ENST00000426059 A6NN06 94 aa8.91□□□□□ -0.98
FN1-208ENST00000426059 SEC61BP60468 96 aaKnown RBP8.88□□□□□ -0.99
FN1-208ENST00000426059 COX6B2Q6YFQ2 88 aa8.88□□□□□ -0.99
FN1-208ENST00000426059 RBM12B-AS1Q9P1G2 102 aa8.86□□□□□ -0.99
FN1-208ENST00000426059 KRTAP4-1Q9BYQ7 146 aa8.85□□□□□ -0.99
FN1-208ENST00000426059 MUC2Q02817 5179 aa8.81□□□□□ -1
FN1-208ENST00000426059 MUC17Q685J3 4493 aa8.81□□□□□ -1
FN1-208ENST00000426059 H1FX-AS1Q4G0G2 97 aa8.65□□□□□ -1.02
FN1-208ENST00000426059 KRTAP3-3Q9BYR6 98 aa8.63□□□□□ -1.03
FN1-208ENST00000426059 UBR4Q5T4S7 5183 aa8.63□□□□□ -1.03
FN1-208ENST00000426059 S4R3F8 94 aa8.63□□□□□ -1.03
FN1-208ENST00000426059 A0A1B0GU69 56 aa8.59□□□□□ -1.03
FN1-208ENST00000426059 KRTAP19-2Q3LHN2 52 aa8.55□□□□□ -1.04
FN1-208ENST00000426059 RNF213Q63HN8 5207 aa8.55□□□□□ -1.04
FN1-208ENST00000426059 PRAC1Q96KF2 57 aa8.53□□□□□ -1.04
FN1-208ENST00000426059 SPATA8Q6RVD6 105 aa8.52□□□□□ -1.05
FN1-208ENST00000426059 ADM2Q7Z4H4 148 aa8.49□□□□□ -1.05
FN1-208ENST00000426059 UQCR11O14957 56 aa8.47□□□□□ -1.05
FN1-208ENST00000426059 MIR22HGQ0VDD5 57 aa8.47□□□□□ -1.05
FN1-208ENST00000426059 CSAG1Q6PB30 78 aa8.41□□□□□ -1.06
FN1-208ENST00000426059 FAT4Q6V0I7 4981 aa8.41□□□□□ -1.06
FN1-208ENST00000426059 LINC01554Q52M75 96 aa8.37□□□□□ -1.07
FN1-208ENST00000426059 FLGP20930 4061 aaPredicted RBP8.34□□□□□ -1.07
FN1-208ENST00000426059 LCE2CQ5TA81 110 aa8.34□□□□□ -1.07
FN1-208ENST00000426059 KRTAP3-2Q9BYR7 98 aa8.33□□□□□ -1.08
FN1-208ENST00000426059 KRTAP10-6P60371 365 aaPredicted RBP8.32□□□□□ -1.08
FN1-208ENST00000426059 P0C880 135 aa8.3□□□□□ -1.08
FN1-208ENST00000426059 A0A1B0GU33 70 aa8.26□□□□□ -1.09
FN1-208ENST00000426059 H0YAA0 97 aa8.18□□□□□ -1.1
FN1-208ENST00000426059 MT1HP80294 61 aa8.17□□□□□ -1.1
FN1-208ENST00000426059 KRTAP13-4Q3LI77 160 aa8.16□□□□□ -1.1
FN1-208ENST00000426059 M0R2T5 61 aa8.13□□□□□ -1.11
FN1-208ENST00000426059 LORP23490 312 aaPredicted RBP8.1□□□□□ -1.11
FN1-208ENST00000426059 A0A0D9SG42 100 aa8.04□□□□□ -1.12
FN1-208ENST00000426059 H3BS24 57 aa8□□□□□ -1.13
FN1-208ENST00000426059 KRTAP25-1Q3LHN0 102 aa7.99□□□□□ -1.13
FN1-208ENST00000426059 M0QZ58 72 aa7.99□□□□□ -1.13
FN1-208ENST00000426059 R4GN34 69 aa7.98□□□□□ -1.13
FN1-208ENST00000426059 KRTAP9-8Q9BYQ0 159 aa7.88□□□□□ -1.15
FN1-208ENST00000426059 K7ERS5 55 aa7.87□□□□□ -1.15
FN1-208ENST00000426059 MT2AP02795 61 aa7.86□□□□□ -1.15
FN1-208ENST00000426059 ROMO1P60602 79 aa7.86□□□□□ -1.15
FN1-208ENST00000426059 MT1FP04733 61 aa7.84□□□□□ -1.15
FN1-208ENST00000426059 KRTAP12-2P59991 146 aa7.82□□□□□ -1.16
FN1-208ENST00000426059 KRTAP10-10P60014 251 aa7.82□□□□□ -1.16
FN1-208ENST00000426059 SPINT4Q6UDR6 99 aa7.81□□□□□ -1.16
FN1-208ENST00000426059 CRIPTQ9P021 101 aa7.81□□□□□ -1.16
FN1-208ENST00000426059 KRTAP12-1P59990 96 aa7.79□□□□□ -1.16
FN1-208ENST00000426059 LCE2AQ5TA79 106 aaPredicted RBP7.77□□□□□ -1.17
FN1-208ENST00000426059 KRTAP19-1Q8IUB9 90 aa7.7□□□□□ -1.18
FN1-208ENST00000426059 SPRR2GQ9BYE4 73 aa7.67□□□□□ -1.18
FN1-208ENST00000426059 KRTAP9-3Q9BYQ3 159 aa7.57□□□□□ -1.2
FN1-208ENST00000426059 CAMK2N1Q7Z7J9 78 aa7.48□□□□□ -1.21
FN1-208ENST00000426059 C10orf95Q9H7T3 257 aa7.47□□□□□ -1.21
FN1-208ENST00000426059 PLAC4Q8WY50 150 aa7.44□□□□□ -1.22
FN1-208ENST00000426059 KRTAP19-8Q3LI54 63 aa7.44□□□□□ -1.22
FN1-208ENST00000426059 MT1BP07438 61 aa7.41□□□□□ -1.22
FN1-208ENST00000426059 LCE2BO14633 110 aa7.4□□□□□ -1.22
FN1-208ENST00000426059 KRTAP15-1Q3LI76 137 aa7.35□□□□□ -1.23
FN1-208ENST00000426059 USH2AO75445 5202 aa7.33□□□□□ -1.24
FN1-208ENST00000426059 NDUFAF8A1L188 74 aa7.3□□□□□ -1.24
FN1-208ENST00000426059 MT1XP80297 61 aa7.19□□□□□ -1.26
FN1-208ENST00000426059 KRTAP10-5P60370 271 aa7.18□□□□□ -1.26
FN1-208ENST00000426059 FSIP2Q5CZC0 6907 aa7.13□□□□□ -1.27
FN1-208ENST00000426059 TNP1P09430 55 aa7.08□□□□□ -1.28
FN1-208ENST00000426059 SSPOA2VEC9 5147 aa7.01□□□□□ -1.29
FN1-208ENST00000426059 PRO2289Q9P1D8 64 aa7.01□□□□□ -1.29
FN1-208ENST00000426059 KRTAP10-7P60409 375 aaPredicted RBP6.96□□□□□ -1.3
FN1-208ENST00000426059 LCE2DQ5TA82 110 aaPredicted RBP6.96□□□□□ -1.3
FN1-208ENST00000426059 LCE3AQ5TA76 89 aa6.86□□□□□ -1.31
FN1-208ENST00000426059 KRTAP19-6Q3LI70 58 aa6.83□□□□□ -1.32
FN1-208ENST00000426059 KMT2DO14686 5537 aa6.83□□□□□ -1.32
FN1-208ENST00000426059 PP632Q6XCG6 107 aa6.82□□□□□ -1.32
FN1-208ENST00000426059 KRTAP10-12P60413 245 aa6.81□□□□□ -1.32
FN1-208ENST00000426059 KRTAP9-2Q9BYQ4 174 aa6.77□□□□□ -1.33
FN1-208ENST00000426059 KRTAP23-1A1A580 65 aa6.76□□□□□ -1.33
FN1-208ENST00000426059 KRTAP4-8A0A0G2JLE6 195 aa6.72□□□□□ -1.33
FN1-208ENST00000426059 KRTAP4-8Q9BYQ9 185 aa6.72□□□□□ -1.33
FN1-208ENST00000426059 FCGBPQ9Y6R7 5405 aaPredicted RBP6.69□□□□□ -1.34
FN1-208ENST00000426059 LUZP6Q538Z0 58 aa6.68□□□□□ -1.34
FN1-208ENST00000426059 KRTAP8-1Q8IUC2 63 aa6.62□□□□□ -1.35
FN1-208ENST00000426059 KRTAP12-3P60328 96 aa6.54□□□□□ -1.36
FN1-208ENST00000426059 A0A0A0MQY5 61 aa6.53□□□□□ -1.36
FN1-208ENST00000426059 KRTAP19-5Q3LI72 72 aa6.53□□□□□ -1.36
FN1-208ENST00000426059 CRCT1Q9UGL9 99 aa6.52□□□□□ -1.37
FN1-208ENST00000426059 MACF1Q9UPN3 7388 aaKnown RBP6.42□□□□□ -1.38
FN1-208ENST00000426059 KRTAP19-7Q3SYF9 63 aa6.42□□□□□ -1.38
FN1-208ENST00000426059 SPRR5A0A1B0GTR4 108 aa6.37□□□□□ -1.39
FN1-208ENST00000426059 MT1EP04732 61 aa6.27□□□□□ -1.41
FN1-208ENST00000426059 SYNE2Q8WXH0 6885 aaKnown RBP6.27□□□□□ -1.41
FN1-208ENST00000426059 MUC12Q9UKN1 5478 aa6.24□□□□□ -1.41
FN1-208ENST00000426059 KRTAP9-6A0A140TA67 174 aa6.17□□□□□ -1.42
FN1-208ENST00000426059 SPRR2FQ96RM1 72 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms