RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 LCA10Q71F78 164 aa7.46□□□□□ -1.22
ACTN4-203ENST00000424234 A8MU10 97 aa7.44□□□□□ -1.22
ACTN4-203ENST00000424234 A0A1B0GU69 56 aa7.43□□□□□ -1.22
ACTN4-203ENST00000424234 SPINK7P58062 85 aa7.43□□□□□ -1.22
ACTN4-203ENST00000424234 SEC61BP60468 96 aaKnown RBP7.42□□□□□ -1.22
ACTN4-203ENST00000424234 ATP11AUNQ6ZP68 121 aa7.42□□□□□ -1.22
ACTN4-203ENST00000424234 RNF213Q63HN8 5207 aa7.39□□□□□ -1.23
ACTN4-203ENST00000424234 SPTSSBQ8NFR3 76 aa7.38□□□□□ -1.23
ACTN4-203ENST00000424234 PMAIP1Q13794 54 aa7.35□□□□□ -1.23
ACTN4-203ENST00000424234 KRTAP4-1Q9BYQ7 146 aa7.33□□□□□ -1.24
ACTN4-203ENST00000424234 MUC2Q02817 5179 aa7.31□□□□□ -1.24
ACTN4-203ENST00000424234 KRTAP3-1Q9BYR8 98 aa7.29□□□□□ -1.24
ACTN4-203ENST00000424234 UQCR11O14957 56 aa7.29□□□□□ -1.24
ACTN4-203ENST00000424234 SEC61GP60059 68 aa7.28□□□□□ -1.24
ACTN4-203ENST00000424234 COX6B2Q6YFQ2 88 aa7.28□□□□□ -1.24
ACTN4-203ENST00000424234 SPATA8Q6RVD6 105 aa7.27□□□□□ -1.25
ACTN4-203ENST00000424234 A6NN06 94 aa7.26□□□□□ -1.25
ACTN4-203ENST00000424234 MIR22HGQ0VDD5 57 aa7.24□□□□□ -1.25
ACTN4-203ENST00000424234 KTN1-AS1Q86SY8 53 aa7.18□□□□□ -1.26
ACTN4-203ENST00000424234 KRTAP19-2Q3LHN2 52 aa7.12□□□□□ -1.27
ACTN4-203ENST00000424234 A0A1B0GU33 70 aa7.08□□□□□ -1.28
ACTN4-203ENST00000424234 H1FX-AS1Q4G0G2 97 aa7.07□□□□□ -1.28
ACTN4-203ENST00000424234 FAT4Q6V0I7 4981 aa7.06□□□□□ -1.28
ACTN4-203ENST00000424234 LCE2CQ5TA81 110 aa7.04□□□□□ -1.28
ACTN4-203ENST00000424234 RBM12B-AS1Q9P1G2 102 aa7.03□□□□□ -1.28
ACTN4-203ENST00000424234 H0YAA0 97 aa7.03□□□□□ -1.28
ACTN4-203ENST00000424234 S4R3F8 94 aa7.03□□□□□ -1.28
ACTN4-203ENST00000424234 FLGP20930 4061 aaPredicted RBP7.02□□□□□ -1.29
ACTN4-203ENST00000424234 KRTAP3-3Q9BYR6 98 aa7.02□□□□□ -1.29
ACTN4-203ENST00000424234 MT1HP80294 61 aa6.92□□□□□ -1.3
ACTN4-203ENST00000424234 KRTAP10-6P60371 365 aaPredicted RBP6.91□□□□□ -1.3
ACTN4-203ENST00000424234 LCE2AQ5TA79 106 aaPredicted RBP6.91□□□□□ -1.3
ACTN4-203ENST00000424234 KRTAP3-2Q9BYR7 98 aa6.88□□□□□ -1.31
ACTN4-203ENST00000424234 K7ERS5 55 aa6.85□□□□□ -1.31
ACTN4-203ENST00000424234 ADM2Q7Z4H4 148 aa6.83□□□□□ -1.32
ACTN4-203ENST00000424234 PRAC1Q96KF2 57 aa6.83□□□□□ -1.32
ACTN4-203ENST00000424234 CSAG1Q6PB30 78 aa6.81□□□□□ -1.32
ACTN4-203ENST00000424234 M0R2T5 61 aa6.79□□□□□ -1.32
ACTN4-203ENST00000424234 P0C880 135 aa6.77□□□□□ -1.33
ACTN4-203ENST00000424234 KRTAP13-4Q3LI77 160 aa6.77□□□□□ -1.33
ACTN4-203ENST00000424234 LORP23490 312 aaPredicted RBP6.7□□□□□ -1.34
ACTN4-203ENST00000424234 A0A0D9SG42 100 aa6.69□□□□□ -1.34
ACTN4-203ENST00000424234 M0QZ58 72 aa6.65□□□□□ -1.34
ACTN4-203ENST00000424234 ROMO1P60602 79 aa6.62□□□□□ -1.35
ACTN4-203ENST00000424234 KRTAP9-8Q9BYQ0 159 aa6.61□□□□□ -1.35
ACTN4-203ENST00000424234 LINC01554Q52M75 96 aa6.61□□□□□ -1.35
ACTN4-203ENST00000424234 KRTAP25-1Q3LHN0 102 aa6.6□□□□□ -1.35
ACTN4-203ENST00000424234 MT2AP02795 61 aa6.57□□□□□ -1.36
ACTN4-203ENST00000424234 KRTAP12-1P59990 96 aa6.55□□□□□ -1.36
ACTN4-203ENST00000424234 KRTAP12-2P59991 146 aa6.54□□□□□ -1.36
ACTN4-203ENST00000424234 MT1FP04733 61 aa6.53□□□□□ -1.36
ACTN4-203ENST00000424234 SPINT4Q6UDR6 99 aa6.51□□□□□ -1.37
ACTN4-203ENST00000424234 R4GN34 69 aa6.48□□□□□ -1.37
ACTN4-203ENST00000424234 KRTAP10-10P60014 251 aa6.47□□□□□ -1.37
ACTN4-203ENST00000424234 CRIPTQ9P021 101 aa6.44□□□□□ -1.38
ACTN4-203ENST00000424234 KRTAP9-3Q9BYQ3 159 aa6.39□□□□□ -1.39
ACTN4-203ENST00000424234 LCE2DQ5TA82 110 aaPredicted RBP6.37□□□□□ -1.39
ACTN4-203ENST00000424234 KRTAP9-2Q9BYQ4 174 aa6.31□□□□□ -1.4
ACTN4-203ENST00000424234 KRTAP19-1Q8IUB9 90 aa6.29□□□□□ -1.4
ACTN4-203ENST00000424234 LCE2BO14633 110 aa6.28□□□□□ -1.4
ACTN4-203ENST00000424234 C10orf95Q9H7T3 257 aa6.27□□□□□ -1.41
ACTN4-203ENST00000424234 SPRR2GQ9BYE4 73 aa6.27□□□□□ -1.41
ACTN4-203ENST00000424234 USH2AO75445 5202 aa6.23□□□□□ -1.41
ACTN4-203ENST00000424234 KRTAP19-8Q3LI54 63 aa6.15□□□□□ -1.42
ACTN4-203ENST00000424234 CAMK2N1Q7Z7J9 78 aa6.13□□□□□ -1.43
ACTN4-203ENST00000424234 MT1BP07438 61 aa6.11□□□□□ -1.43
ACTN4-203ENST00000424234 FSIP2Q5CZC0 6907 aa6.08□□□□□ -1.44
ACTN4-203ENST00000424234 SSPOA2VEC9 5147 aa6.07□□□□□ -1.44
ACTN4-203ENST00000424234 KRTAP9-6A0A140TA67 174 aa6.07□□□□□ -1.44
ACTN4-203ENST00000424234 CRCT1Q9UGL9 99 aa6.02□□□□□ -1.45
ACTN4-203ENST00000424234 PP632Q6XCG6 107 aa5.99□□□□□ -1.45
ACTN4-203ENST00000424234 KRTAP19-6Q3LI70 58 aa5.97□□□□□ -1.45
ACTN4-203ENST00000424234 KRTAP15-1Q3LI76 137 aa5.94□□□□□ -1.46
ACTN4-203ENST00000424234 PLAC4Q8WY50 150 aa5.94□□□□□ -1.46
ACTN4-203ENST00000424234 TNP1P09430 55 aa5.92□□□□□ -1.46
ACTN4-203ENST00000424234 KRTAP23-1A1A580 65 aa5.88□□□□□ -1.47
ACTN4-203ENST00000424234 FCGBPQ9Y6R7 5405 aaPredicted RBP5.87□□□□□ -1.47
ACTN4-203ENST00000424234 KRTAP10-5P60370 271 aa5.87□□□□□ -1.47
ACTN4-203ENST00000424234 MT1XP80297 61 aa5.84□□□□□ -1.47
ACTN4-203ENST00000424234 PRO2289Q9P1D8 64 aa5.78□□□□□ -1.48
ACTN4-203ENST00000424234 H3BS24 57 aa5.68□□□□□ -1.5
ACTN4-203ENST00000424234 NDUFAF8A1L188 74 aa5.67□□□□□ -1.5
ACTN4-203ENST00000424234 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.61□□□□□ -1.51
ACTN4-203ENST00000424234 KRTAP10-7P60409 375 aaPredicted RBP5.59□□□□□ -1.52
ACTN4-203ENST00000424234 LCE3AQ5TA76 89 aa5.58□□□□□ -1.52
ACTN4-203ENST00000424234 MACF1Q9UPN3 7388 aaKnown RBP5.56□□□□□ -1.52
ACTN4-203ENST00000424234 KRTAP10-12P60413 245 aa5.54□□□□□ -1.52
ACTN4-203ENST00000424234 KMT2DO14686 5537 aa5.54□□□□□ -1.52
ACTN4-203ENST00000424234 LUZP6Q538Z0 58 aa5.5□□□□□ -1.53
ACTN4-203ENST00000424234 KRTAP8-1Q8IUC2 63 aa5.48□□□□□ -1.53
ACTN4-203ENST00000424234 SPRR5A0A1B0GTR4 108 aa5.47□□□□□ -1.53
ACTN4-203ENST00000424234 KRTAP9-7A8MTY7 169 aa5.45□□□□□ -1.54
ACTN4-203ENST00000424234 KRTAP4-8A0A0G2JLE6 195 aa5.44□□□□□ -1.54
ACTN4-203ENST00000424234 KRTAP4-8Q9BYQ9 185 aa5.44□□□□□ -1.54
ACTN4-203ENST00000424234 SYNE2Q8WXH0 6885 aaKnown RBP5.41□□□□□ -1.54
ACTN4-203ENST00000424234 KRTAP6-3Q3LI67 103 aa5.36□□□□□ -1.55
ACTN4-203ENST00000424234 KRTAP12-3P60328 96 aa5.33□□□□□ -1.56
ACTN4-203ENST00000424234 KRTAP5-9P26371 169 aa5.33□□□□□ -1.56
ACTN4-203ENST00000424234 SPRR2FQ96RM1 72 aa5.27□□□□□ -1.57
ACTN4-203ENST00000424234 MUC12Q9UKN1 5478 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms