RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 FSIP2Q5CZC0 6907 aa8.63□□□□□ -1.03
HDAC6-205ENST00000423941 TRAV7A0A075B6U4 112 aa8.62□□□□□ -1.03
HDAC6-205ENST00000423941 A8MUN3 132 aa8.62□□□□□ -1.03
HDAC6-205ENST00000423941 LCE2BO14633 110 aa8.62□□□□□ -1.03
HDAC6-205ENST00000423941 USH2AO75445 5202 aa8.51□□□□□ -1.05
HDAC6-205ENST00000423941 DMAC1Q96GE9 116 aa8.48□□□□□ -1.05
HDAC6-205ENST00000423941 NDUFC1O43677 76 aa8.47□□□□□ -1.05
HDAC6-205ENST00000423941 SERP2Q8N6R1 65 aa8.43□□□□□ -1.06
HDAC6-205ENST00000423941 KRTAP19-1Q8IUB9 90 aa8.42□□□□□ -1.06
HDAC6-205ENST00000423941 H0YAA0 97 aa8.41□□□□□ -1.06
HDAC6-205ENST00000423941 SSPOA2VEC9 5147 aa8.38□□□□□ -1.07
HDAC6-205ENST00000423941 SPRR2GQ9BYE4 73 aa8.36□□□□□ -1.07
HDAC6-205ENST00000423941 SNURFQ9Y675 71 aa8.36□□□□□ -1.07
HDAC6-205ENST00000423941 C20orf197Q8N268 126 aa8.33□□□□□ -1.08
HDAC6-205ENST00000423941 ACYP2P14621 99 aa8.31□□□□□ -1.08
HDAC6-205ENST00000423941 SPANXA2-OT1Q8N9U9 137 aa8.29□□□□□ -1.08
HDAC6-205ENST00000423941 CRIPTQ9P021 101 aa8.29□□□□□ -1.08
HDAC6-205ENST00000423941 KRTAP19-6Q3LI70 58 aa8.28□□□□□ -1.08
HDAC6-205ENST00000423941 KRTAP19-8Q3LI54 63 aa8.27□□□□□ -1.09
HDAC6-205ENST00000423941 COX7CP15954 63 aa8.25□□□□□ -1.09
HDAC6-205ENST00000423941 ADM2Q7Z4H4 148 aa8.23□□□□□ -1.09
HDAC6-205ENST00000423941 MT1BP07438 61 aa8.22□□□□□ -1.09
HDAC6-205ENST00000423941 FCGBPQ9Y6R7 5405 aaPredicted RBP8.18□□□□□ -1.1
HDAC6-205ENST00000423941 KRTAP3-2Q9BYR7 98 aa8.16□□□□□ -1.1
HDAC6-205ENST00000423941 Q5VV11 94 aa8.15□□□□□ -1.1
HDAC6-205ENST00000423941 P0C880 135 aa8.13□□□□□ -1.11
HDAC6-205ENST00000423941 SPTSSBQ8NFR3 76 aa8.11□□□□□ -1.11
HDAC6-205ENST00000423941 CYSTM1Q9H1C7 97 aa8.1□□□□□ -1.11
HDAC6-205ENST00000423941 H7BZZ5 65 aa8.09□□□□□ -1.11
HDAC6-205ENST00000423941 CHKB-CPT1BH3BT56 60 aa8.07□□□□□ -1.12
HDAC6-205ENST00000423941 ANAPC13Q9BS18 74 aa8.06□□□□□ -1.12
HDAC6-205ENST00000423941 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-205ENST00000423941 R4GN34 69 aa7.99□□□□□ -1.13
HDAC6-205ENST00000423941 COA5Q86WW8 74 aa7.98□□□□□ -1.13
HDAC6-205ENST00000423941 KRTAP10-5P60370 271 aa7.96□□□□□ -1.14
HDAC6-205ENST00000423941 M0QZ58 72 aa7.93□□□□□ -1.14
HDAC6-205ENST00000423941 A6NN06 94 aa7.92□□□□□ -1.14
HDAC6-205ENST00000423941 CCDC179H3BU77 68 aa7.92□□□□□ -1.14
HDAC6-205ENST00000423941 KRTAP9-7A8MTY7 169 aa7.85□□□□□ -1.15
HDAC6-205ENST00000423941 MACF1Q9UPN3 7388 aaKnown RBP7.81□□□□□ -1.16
HDAC6-205ENST00000423941 PLAC4Q8WY50 150 aa7.8□□□□□ -1.16
HDAC6-205ENST00000423941 MT1XP80297 61 aa7.77□□□□□ -1.17
HDAC6-205ENST00000423941 LINC01554Q52M75 96 aa7.75□□□□□ -1.17
HDAC6-205ENST00000423941 ATP5EP56381 51 aaPredicted RBP7.73□□□□□ -1.17
HDAC6-205ENST00000423941 KRTAP13-4Q3LI77 160 aa7.73□□□□□ -1.17
HDAC6-205ENST00000423941 PRO2289Q9P1D8 64 aa7.7□□□□□ -1.18
HDAC6-205ENST00000423941 SEC61GP60059 68 aa7.68□□□□□ -1.18
HDAC6-205ENST00000423941 SERP1Q9Y6X1 66 aa7.67□□□□□ -1.18
HDAC6-205ENST00000423941 KRTAP6-3Q3LI67 103 aa7.66□□□□□ -1.18
HDAC6-205ENST00000423941 TMEM258P61165 79 aa7.64□□□□□ -1.19
HDAC6-205ENST00000423941 SYNE2Q8WXH0 6885 aaKnown RBP7.59□□□□□ -1.19
HDAC6-205ENST00000423941 A0A1B0GU33 70 aa7.58□□□□□ -1.2
HDAC6-205ENST00000423941 A0A1B0GU69 56 aa7.54□□□□□ -1.2
HDAC6-205ENST00000423941 KRTAP12-2P59991 146 aa7.54□□□□□ -1.2
HDAC6-205ENST00000423941 SPATA8Q6RVD6 105 aa7.51□□□□□ -1.21
HDAC6-205ENST00000423941 LINC01558Q9Y6Z2 57 aa7.47□□□□□ -1.21
HDAC6-205ENST00000423941 KRTAP5-9P26371 169 aa7.46□□□□□ -1.22
HDAC6-205ENST00000423941 A0A0D9SG42 100 aa7.41□□□□□ -1.22
HDAC6-205ENST00000423941 KRTAP10-12P60413 245 aa7.4□□□□□ -1.22
HDAC6-205ENST00000423941 KRTAP12-1P59990 96 aa7.39□□□□□ -1.23
HDAC6-205ENST00000423941 KRTAP10-7P60409 375 aaPredicted RBP7.39□□□□□ -1.23
HDAC6-205ENST00000423941 PRR15LQ9BU68 103 aa7.38□□□□□ -1.23
HDAC6-205ENST00000423941 SMIM26A0A096LP01 95 aa7.35□□□□□ -1.23
HDAC6-205ENST00000423941 CAMK2N1Q7Z7J9 78 aa7.35□□□□□ -1.23
HDAC6-205ENST00000423941 KRTAP4-8A0A0G2JLE6 195 aa7.32□□□□□ -1.24
HDAC6-205ENST00000423941 KMT2DO14686 5537 aa7.32□□□□□ -1.24
HDAC6-205ENST00000423941 KRTAP4-8Q9BYQ9 185 aa7.32□□□□□ -1.24
HDAC6-205ENST00000423941 SPINT4Q6UDR6 99 aa7.3□□□□□ -1.24
HDAC6-205ENST00000423941 A8MU10 97 aa7.29□□□□□ -1.24
HDAC6-205ENST00000423941 KRTAP8-1Q8IUC2 63 aa7.29□□□□□ -1.24
HDAC6-205ENST00000423941 MUC12Q9UKN1 5478 aa7.22□□□□□ -1.25
HDAC6-205ENST00000423941 PCP4P48539 62 aa7.22□□□□□ -1.25
HDAC6-205ENST00000423941 SPRR2FQ96RM1 72 aa7.21□□□□□ -1.26
HDAC6-205ENST00000423941 UQCR11O14957 56 aa7.19□□□□□ -1.26
HDAC6-205ENST00000423941 Q1T7F1 81 aa7.18□□□□□ -1.26
HDAC6-205ENST00000423941 V9GYY9 64 aa7.17□□□□□ -1.26
HDAC6-205ENST00000423941 NEBP20929 6669 aa7.12□□□□□ -1.27
HDAC6-205ENST00000423941 RPS28P62857 69 aaKnown RBP7.1□□□□□ -1.27
HDAC6-205ENST00000423941 MDN1Q9NU22 5596 aa7.09□□□□□ -1.27
HDAC6-205ENST00000423941 LCE1AQ5T7P2 110 aa7.06□□□□□ -1.28
HDAC6-205ENST00000423941 PSPHP1O15172 72 aa7.05□□□□□ -1.28
HDAC6-205ENST00000423941 C10orf95Q9H7T3 257 aa7.04□□□□□ -1.28
HDAC6-205ENST00000423941 SPRR2EP22531 72 aa7.03□□□□□ -1.28
HDAC6-205ENST00000423941 SPRR2BP35325 72 aa7.03□□□□□ -1.28
HDAC6-205ENST00000423941 SPRR2AP35326 72 aa7.03□□□□□ -1.28
HDAC6-205ENST00000423941 MIR22HGQ0VDD5 57 aa7.03□□□□□ -1.28
HDAC6-205ENST00000423941 KRTAP19-7Q3SYF9 63 aa6.96□□□□□ -1.3
HDAC6-205ENST00000423941 TNP1P09430 55 aa6.91□□□□□ -1.3
HDAC6-205ENST00000423941 KRTAP20-1Q3LI63 56 aa6.88□□□□□ -1.31
HDAC6-205ENST00000423941 MT1EP04732 61 aa6.85□□□□□ -1.31
HDAC6-205ENST00000423941 KRTAP2-3P0C7H8 128 aa6.83□□□□□ -1.32
HDAC6-205ENST00000423941 KRTAP2-4Q9BYR9 128 aa6.83□□□□□ -1.32
HDAC6-205ENST00000423941 A6NED7 52 aa6.81□□□□□ -1.32
HDAC6-205ENST00000423941 K7ERS5 55 aa6.8□□□□□ -1.32
HDAC6-205ENST00000423941 KRTAP19-5Q3LI72 72 aa6.8□□□□□ -1.32
HDAC6-205ENST00000423941 SPRR2DP22532 72 aa6.79□□□□□ -1.32
HDAC6-205ENST00000423941 LCE3AQ5TA76 89 aa6.79□□□□□ -1.32
HDAC6-205ENST00000423941 LCE5AQ5TCM9 118 aa6.74□□□□□ -1.33
HDAC6-205ENST00000423941 KRTAP19-3Q7Z4W3 81 aa6.73□□□□□ -1.33
HDAC6-205ENST00000423941 KRTAP25-1Q3LHN0 102 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms