RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 C4orf26Q17RF5 130 aa4.59□□□□□ -1.67
PDGFC-202ENST00000422544 KRTAP9-3Q9BYQ3 159 aa4.59□□□□□ -1.67
PDGFC-202ENST00000422544 CYP4F30PQ9H0H9 118 aa4.59□□□□□ -1.67
PDGFC-202ENST00000422544 KRTAP10-6P60371 365 aaPredicted RBP4.58□□□□□ -1.68
PDGFC-202ENST00000422544 LOC101927531A0A1B0GV80 90 aa4.57□□□□□ -1.68
PDGFC-202ENST00000422544 ATOX1O00244 68 aa4.57□□□□□ -1.68
PDGFC-202ENST00000422544 LCE5AQ5TCM9 118 aa4.56□□□□□ -1.68
PDGFC-202ENST00000422544 H1FX-AS1Q4G0G2 97 aa4.55□□□□□ -1.68
PDGFC-202ENST00000422544 C1orf64Q8NEQ6 169 aa4.55□□□□□ -1.68
PDGFC-202ENST00000422544 FAM236AA0A1B0GUQ0 79 aa4.54□□□□□ -1.68
PDGFC-202ENST00000422544 FAM236BA0A1B0GV22 79 aa4.54□□□□□ -1.68
PDGFC-202ENST00000422544 MP68P56378 58 aa4.54□□□□□ -1.68
PDGFC-202ENST00000422544 C5orf47Q569G3 176 aa4.54□□□□□ -1.68
PDGFC-202ENST00000422544 LINC00208Q96KT6 92 aa4.54□□□□□ -1.68
PDGFC-202ENST00000422544 KRTAP23-1A1A580 65 aa4.51□□□□□ -1.69
PDGFC-202ENST00000422544 TRAV7A0A075B6U4 112 aa4.49□□□□□ -1.69
PDGFC-202ENST00000422544 H3BPC8 53 aa4.49□□□□□ -1.69
PDGFC-202ENST00000422544 KLKP1Q107X0 134 aa4.49□□□□□ -1.69
PDGFC-202ENST00000422544 SMIM20Q8N5G0 67 aa4.49□□□□□ -1.69
PDGFC-202ENST00000422544 KRTAP9-8Q9BYQ0 159 aa4.48□□□□□ -1.69
PDGFC-202ENST00000422544 MACF1Q9UPN3 7388 aaKnown RBP4.47□□□□□ -1.69
PDGFC-202ENST00000422544 KRTAP4-11Q9BYQ6 195 aa4.47□□□□□ -1.69
PDGFC-202ENST00000422544 SYNE2Q8WXH0 6885 aaKnown RBP4.45□□□□□ -1.7
PDGFC-202ENST00000422544 KRTAP4-2Q9BYR5 136 aa4.44□□□□□ -1.7
PDGFC-202ENST00000422544 S4R3F8 94 aa4.44□□□□□ -1.7
PDGFC-202ENST00000422544 MT2AP02795 61 aa4.43□□□□□ -1.7
PDGFC-202ENST00000422544 LCA10Q71F78 164 aa4.42□□□□□ -1.7
PDGFC-202ENST00000422544 SERP2Q8N6R1 65 aa4.41□□□□□ -1.7
PDGFC-202ENST00000422544 MT1FP04733 61 aa4.4□□□□□ -1.71
PDGFC-202ENST00000422544 A8MUN3 132 aa4.39□□□□□ -1.71
PDGFC-202ENST00000422544 KRTAP10-10P60014 251 aa4.39□□□□□ -1.71
PDGFC-202ENST00000422544 CSAG1Q6PB30 78 aa4.39□□□□□ -1.71
PDGFC-202ENST00000422544 SNURFQ9Y675 71 aa4.39□□□□□ -1.71
PDGFC-202ENST00000422544 C20orf197Q8N268 126 aa4.38□□□□□ -1.71
PDGFC-202ENST00000422544 DMAC1Q96GE9 116 aa4.35□□□□□ -1.71
PDGFC-202ENST00000422544 NDUFC1O43677 76 aa4.34□□□□□ -1.71
PDGFC-202ENST00000422544 COX7CP15954 63 aa4.33□□□□□ -1.72
PDGFC-202ENST00000422544 ACYP2P14621 99 aa4.29□□□□□ -1.72
PDGFC-202ENST00000422544 ANAPC13Q9BS18 74 aa4.29□□□□□ -1.72
PDGFC-202ENST00000422544 SPANXA2-OT1Q8N9U9 137 aa4.28□□□□□ -1.72
PDGFC-202ENST00000422544 MUC12Q9UKN1 5478 aa4.26□□□□□ -1.73
PDGFC-202ENST00000422544 NEBP20929 6669 aa4.26□□□□□ -1.73
PDGFC-202ENST00000422544 CYSTM1Q9H1C7 97 aa4.25□□□□□ -1.73
PDGFC-202ENST00000422544 PCP4P48539 62 aa4.24□□□□□ -1.73
PDGFC-202ENST00000422544 KRTAP15-1Q3LI76 137 aa4.23□□□□□ -1.73
PDGFC-202ENST00000422544 ADM2Q7Z4H4 148 aa4.23□□□□□ -1.73
PDGFC-202ENST00000422544 H0YAA0 97 aa4.22□□□□□ -1.73
PDGFC-202ENST00000422544 CHKB-CPT1BH3BT56 60 aa4.22□□□□□ -1.73
PDGFC-202ENST00000422544 CCDC179H3BU77 68 aa4.22□□□□□ -1.73
PDGFC-202ENST00000422544 H7BZZ5 65 aa4.22□□□□□ -1.73
PDGFC-202ENST00000422544 KRTAP6-3Q3LI67 103 aa4.2□□□□□ -1.74
PDGFC-202ENST00000422544 SPTSSBQ8NFR3 76 aa4.19□□□□□ -1.74
PDGFC-202ENST00000422544 KRTAP19-6Q3LI70 58 aa4.18□□□□□ -1.74
PDGFC-202ENST00000422544 SPRR2GQ9BYE4 73 aa4.17□□□□□ -1.74
PDGFC-202ENST00000422544 COA5Q86WW8 74 aa4.16□□□□□ -1.74
PDGFC-202ENST00000422544 CRIPTQ9P021 101 aa4.16□□□□□ -1.74
PDGFC-202ENST00000422544 P0C880 135 aa4.15□□□□□ -1.75
PDGFC-202ENST00000422544 KRTAP19-8Q3LI54 63 aa4.11□□□□□ -1.75
PDGFC-202ENST00000422544 MT1BP07438 61 aa4.09□□□□□ -1.75
PDGFC-202ENST00000422544 Q5VV11 94 aa4.09□□□□□ -1.75
PDGFC-202ENST00000422544 R4GN34 69 aa4.08□□□□□ -1.76
PDGFC-202ENST00000422544 MDN1Q9NU22 5596 aa4.07□□□□□ -1.76
PDGFC-202ENST00000422544 M0QZ58 72 aa4.06□□□□□ -1.76
PDGFC-202ENST00000422544 ATP5EP56381 51 aaPredicted RBP4.05□□□□□ -1.76
PDGFC-202ENST00000422544 TMEM258P61165 79 aa4.03□□□□□ -1.76
PDGFC-202ENST00000422544 KRTAP20-1Q3LI63 56 aa4.03□□□□□ -1.76
PDGFC-202ENST00000422544 KMT2DO14686 5537 aa4.02□□□□□ -1.77
PDGFC-202ENST00000422544 SEC61GP60059 68 aa4.01□□□□□ -1.77
PDGFC-202ENST00000422544 LINC01554Q52M75 96 aa4.01□□□□□ -1.77
PDGFC-202ENST00000422544 SERP1Q9Y6X1 66 aa4□□□□□ -1.77
PDGFC-202ENST00000422544 A6NN06 94 aa3.97□□□□□ -1.77
PDGFC-202ENST00000422544 PLAC4Q8WY50 150 aa3.97□□□□□ -1.77
PDGFC-202ENST00000422544 KRTAP13-4Q3LI77 160 aa3.96□□□□□ -1.78
PDGFC-202ENST00000422544 A0A1B0GU69 56 aa3.95□□□□□ -1.78
PDGFC-202ENST00000422544 KRTAP10-5P60370 271 aa3.95□□□□□ -1.78
PDGFC-202ENST00000422544 A0A0A0MQY5 61 aa3.93□□□□□ -1.78
PDGFC-202ENST00000422544 A0A1B0GU33 70 aa3.93□□□□□ -1.78
PDGFC-202ENST00000422544 KRTAP5-9P26371 169 aa3.9□□□□□ -1.79
PDGFC-202ENST00000422544 SPATA8Q6RVD6 105 aa3.9□□□□□ -1.79
PDGFC-202ENST00000422544 LINC01558Q9Y6Z2 57 aa3.89□□□□□ -1.79
PDGFC-202ENST00000422544 MT1XP80297 61 aa3.88□□□□□ -1.79
PDGFC-202ENST00000422544 A0A0D9SG42 100 aa3.87□□□□□ -1.79
PDGFC-202ENST00000422544 PRR15LQ9BU68 103 aa3.87□□□□□ -1.79
PDGFC-202ENST00000422544 PRO2289Q9P1D8 64 aa3.87□□□□□ -1.79
PDGFC-202ENST00000422544 KRTAP2-3P0C7H8 128 aa3.83□□□□□ -1.8
PDGFC-202ENST00000422544 KRTAP2-4Q9BYR9 128 aa3.83□□□□□ -1.8
PDGFC-202ENST00000422544 KRTAP5-3Q6L8H2 238 aa3.81□□□□□ -1.8
PDGFC-202ENST00000422544 SMIM26A0A096LP01 95 aa3.8□□□□□ -1.8
PDGFC-202ENST00000422544 A8MU10 97 aa3.8□□□□□ -1.8
PDGFC-202ENST00000422544 SPINT4Q6UDR6 99 aa3.8□□□□□ -1.8
PDGFC-202ENST00000422544 CAMK2N1Q7Z7J9 78 aa3.79□□□□□ -1.8
PDGFC-202ENST00000422544 KRTAP12-1P59990 96 aa3.78□□□□□ -1.8
PDGFC-202ENST00000422544 KRTAP12-2P59991 146 aa3.77□□□□□ -1.81
PDGFC-202ENST00000422544 Q1T7F1 81 aa3.77□□□□□ -1.81
PDGFC-202ENST00000422544 V9GYY9 64 aa3.77□□□□□ -1.81
PDGFC-202ENST00000422544 PSPHP1O15172 72 aa3.76□□□□□ -1.81
PDGFC-202ENST00000422544 RPS28P62857 69 aaKnown RBP3.76□□□□□ -1.81
PDGFC-202ENST00000422544 UQCR11O14957 56 aa3.75□□□□□ -1.81
PDGFC-202ENST00000422544 GPR98Q8WXG9 6306 aa3.74□□□□□ -1.81
PDGFC-202ENST00000422544 KRTAP10-7P60409 375 aaPredicted RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms