RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 KRTAP19-6Q3LI70 58 aa12.07□□□□□ -0.48
CDK9-202ENST00000421939 KLKP1Q107X0 134 aa12.03□□□□□ -0.48
CDK9-202ENST00000421939 A8MUN3 132 aa12□□□□□ -0.49
CDK9-202ENST00000421939 SCGB1A1P11684 91 aa11.96□□□□□ -0.49
CDK9-202ENST00000421939 NDUFC1O43677 76 aa11.94□□□□□ -0.5
CDK9-202ENST00000421939 H3BPC8 53 aa11.93□□□□□ -0.5
CDK9-202ENST00000421939 SPRR2GQ9BYE4 73 aa11.91□□□□□ -0.5
CDK9-202ENST00000421939 K7ERU9 68 aa11.89□□□□□ -0.51
CDK9-202ENST00000421939 IMUPQ9GZP8 106 aa11.88□□□□□ -0.51
CDK9-202ENST00000421939 KRTAP9-7A8MTY7 169 aa11.87□□□□□ -0.51
CDK9-202ENST00000421939 MT-ATP8P03928 68 aa11.84□□□□□ -0.51
CDK9-202ENST00000421939 KRTAP19-8Q3LI54 63 aa11.81□□□□□ -0.52
CDK9-202ENST00000421939 Q5VV11 94 aa11.8□□□□□ -0.52
CDK9-202ENST00000421939 H0YAA0 97 aa11.79□□□□□ -0.52
CDK9-202ENST00000421939 MT1BP07438 61 aa11.79□□□□□ -0.52
CDK9-202ENST00000421939 CRIPTQ9P021 101 aa11.78□□□□□ -0.52
CDK9-202ENST00000421939 DMAC1Q96GE9 116 aa11.73□□□□□ -0.53
CDK9-202ENST00000421939 MACF1Q9UPN3 7388 aaKnown RBP11.7□□□□□ -0.54
CDK9-202ENST00000421939 SMIM20Q8N5G0 67 aa11.69□□□□□ -0.54
CDK9-202ENST00000421939 TRAV7A0A075B6U4 112 aa11.67□□□□□ -0.54
CDK9-202ENST00000421939 ADM2Q7Z4H4 148 aa11.66□□□□□ -0.54
CDK9-202ENST00000421939 A6NN06 94 aa11.59□□□□□ -0.55
CDK9-202ENST00000421939 SYNE2Q8WXH0 6885 aaKnown RBP11.52□□□□□ -0.57
CDK9-202ENST00000421939 KRTAP10-5P60370 271 aa11.49□□□□□ -0.57
CDK9-202ENST00000421939 ACYP2P14621 99 aa11.45□□□□□ -0.58
CDK9-202ENST00000421939 C20orf197Q8N268 126 aa11.44□□□□□ -0.58
CDK9-202ENST00000421939 P0C880 135 aa11.43□□□□□ -0.58
CDK9-202ENST00000421939 SNURFQ9Y675 71 aa11.41□□□□□ -0.58
CDK9-202ENST00000421939 R4GN34 69 aa11.36□□□□□ -0.59
CDK9-202ENST00000421939 KRTAP3-2Q9BYR7 98 aa11.35□□□□□ -0.59
CDK9-202ENST00000421939 KRTAP6-3Q3LI67 103 aa11.34□□□□□ -0.59
CDK9-202ENST00000421939 SERP2Q8N6R1 65 aa11.33□□□□□ -0.6
CDK9-202ENST00000421939 SPTSSBQ8NFR3 76 aa11.3□□□□□ -0.6
CDK9-202ENST00000421939 M0QZ58 72 aa11.28□□□□□ -0.6
CDK9-202ENST00000421939 CHKB-CPT1BH3BT56 60 aa11.26□□□□□ -0.61
CDK9-202ENST00000421939 SPANXA2-OT1Q8N9U9 137 aa11.25□□□□□ -0.61
CDK9-202ENST00000421939 PLAC4Q8WY50 150 aa11.19□□□□□ -0.62
CDK9-202ENST00000421939 PRO2289Q9P1D8 64 aa11.13□□□□□ -0.63
CDK9-202ENST00000421939 MT1XP80297 61 aa11.1□□□□□ -0.63
CDK9-202ENST00000421939 LINC01554Q52M75 96 aa11.1□□□□□ -0.63
CDK9-202ENST00000421939 COX7CP15954 63 aa11.02□□□□□ -0.65
CDK9-202ENST00000421939 MUC12Q9UKN1 5478 aa10.97□□□□□ -0.65
CDK9-202ENST00000421939 COA5Q86WW8 74 aa10.93□□□□□ -0.66
CDK9-202ENST00000421939 KRTAP5-9P26371 169 aa10.91□□□□□ -0.66
CDK9-202ENST00000421939 KMT2DO14686 5537 aa10.85□□□□□ -0.67
CDK9-202ENST00000421939 NEBP20929 6669 aa10.85□□□□□ -0.67
CDK9-202ENST00000421939 H7BZZ5 65 aa10.83□□□□□ -0.68
CDK9-202ENST00000421939 CYSTM1Q9H1C7 97 aa10.83□□□□□ -0.68
CDK9-202ENST00000421939 KRTAP12-2P59991 146 aa10.8□□□□□ -0.68
CDK9-202ENST00000421939 KRTAP13-4Q3LI77 160 aa10.75□□□□□ -0.69
CDK9-202ENST00000421939 MDN1Q9NU22 5596 aa10.74□□□□□ -0.69
CDK9-202ENST00000421939 ANAPC13Q9BS18 74 aa10.73□□□□□ -0.69
CDK9-202ENST00000421939 SEC61GP60059 68 aa10.66□□□□□ -0.7
CDK9-202ENST00000421939 KRTAP8-1Q8IUC2 63 aa10.65□□□□□ -0.7
CDK9-202ENST00000421939 SPRR2FQ96RM1 72 aa10.64□□□□□ -0.71
CDK9-202ENST00000421939 SERP1Q9Y6X1 66 aa10.64□□□□□ -0.71
CDK9-202ENST00000421939 KRTAP10-7P60409 375 aaPredicted RBP10.59□□□□□ -0.71
CDK9-202ENST00000421939 KRTAP4-8A0A0G2JLE6 195 aa10.54□□□□□ -0.72
CDK9-202ENST00000421939 KRTAP10-12P60413 245 aa10.54□□□□□ -0.72
CDK9-202ENST00000421939 KRTAP4-8Q9BYQ9 185 aa10.54□□□□□ -0.72
CDK9-202ENST00000421939 CCDC179H3BU77 68 aa10.49□□□□□ -0.73
CDK9-202ENST00000421939 CAMK2N1Q7Z7J9 78 aa10.48□□□□□ -0.73
CDK9-202ENST00000421939 A0A1B0GU33 70 aa10.46□□□□□ -0.73
CDK9-202ENST00000421939 A0A0D9SG42 100 aa10.44□□□□□ -0.74
CDK9-202ENST00000421939 SPRR2EP22531 72 aa10.43□□□□□ -0.74
CDK9-202ENST00000421939 SPRR2BP35325 72 aa10.43□□□□□ -0.74
CDK9-202ENST00000421939 SPRR2AP35326 72 aa10.43□□□□□ -0.74
CDK9-202ENST00000421939 KRTAP20-1Q3LI63 56 aa10.43□□□□□ -0.74
CDK9-202ENST00000421939 SPATA8Q6RVD6 105 aa10.43□□□□□ -0.74
CDK9-202ENST00000421939 A0A1B0GU69 56 aa10.36□□□□□ -0.75
CDK9-202ENST00000421939 ATP5EP56381 51 aaPredicted RBP10.35□□□□□ -0.75
CDK9-202ENST00000421939 LCE1AQ5T7P2 110 aa10.32□□□□□ -0.76
CDK9-202ENST00000421939 SPINT4Q6UDR6 99 aa10.27□□□□□ -0.77
CDK9-202ENST00000421939 KRTAP12-1P59990 96 aa10.23□□□□□ -0.77
CDK9-202ENST00000421939 KRTAP2-3P0C7H8 128 aa10.19□□□□□ -0.78
CDK9-202ENST00000421939 KRTAP2-4Q9BYR9 128 aa10.19□□□□□ -0.78
CDK9-202ENST00000421939 SMIM26A0A096LP01 95 aa10.18□□□□□ -0.78
CDK9-202ENST00000421939 PCP4P48539 62 aa10.13□□□□□ -0.79
CDK9-202ENST00000421939 TMEM258P61165 79 aa10.13□□□□□ -0.79
CDK9-202ENST00000421939 PRR15LQ9BU68 103 aa10.11□□□□□ -0.79
CDK9-202ENST00000421939 A8MU10 97 aa10.09□□□□□ -0.79
CDK9-202ENST00000421939 SPRR2DP22532 72 aa10.08□□□□□ -0.8
CDK9-202ENST00000421939 LINC01558Q9Y6Z2 57 aa10.03□□□□□ -0.8
CDK9-202ENST00000421939 KRTAP19-7Q3SYF9 63 aa9.92□□□□□ -0.82
CDK9-202ENST00000421939 KRTAP2-2Q9BYT5 123 aa9.88□□□□□ -0.83
CDK9-202ENST00000421939 KRTAP2-1Q9BYU5 128 aa9.88□□□□□ -0.83
CDK9-202ENST00000421939 MT1EP04732 61 aa9.83□□□□□ -0.84
CDK9-202ENST00000421939 LCE3BQ5TA77 95 aa9.79□□□□□ -0.84
CDK9-202ENST00000421939 UQCR11O14957 56 aa9.77□□□□□ -0.85
CDK9-202ENST00000421939 C10orf95Q9H7T3 257 aa9.75□□□□□ -0.85
CDK9-202ENST00000421939 KRTAP19-5Q3LI72 72 aa9.71□□□□□ -0.86
CDK9-202ENST00000421939 KRTAP19-3Q7Z4W3 81 aa9.71□□□□□ -0.86
CDK9-202ENST00000421939 TNP1P09430 55 aa9.7□□□□□ -0.86
CDK9-202ENST00000421939 LCE5AQ5TCM9 118 aa9.7□□□□□ -0.86
CDK9-202ENST00000421939 LCE3AQ5TA76 89 aa9.59□□□□□ -0.87
CDK9-202ENST00000421939 MIR22HGQ0VDD5 57 aa9.56□□□□□ -0.88
CDK9-202ENST00000421939 V9GYY9 64 aa9.55□□□□□ -0.88
CDK9-202ENST00000421939 PSPHP1O15172 72 aa9.48□□□□□ -0.89
CDK9-202ENST00000421939 MT1GP13640 62 aa9.48□□□□□ -0.89
CDK9-202ENST00000421939 Q1T7F1 81 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms