RNA–Protein interactions for RNA: ENST00000421816.6

GCDH-202, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,109 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-202ENST00000421816 A8MUN3 132 aa9.06□□□□□ -0.96
GCDH-202ENST00000421816 CRCT1Q9UGL9 99 aa9.05□□□□□ -0.96
GCDH-202ENST00000421816 FSIP2Q5CZC0 6907 aa9.02□□□□□ -0.96
GCDH-202ENST00000421816 LCE2BO14633 110 aa9□□□□□ -0.97
GCDH-202ENST00000421816 USH2AO75445 5202 aa8.98□□□□□ -0.97
GCDH-202ENST00000421816 NDUFC1O43677 76 aa8.92□□□□□ -0.98
GCDH-202ENST00000421816 DMAC1Q96GE9 116 aa8.92□□□□□ -0.98
GCDH-202ENST00000421816 SERP2Q8N6R1 65 aa8.89□□□□□ -0.99
GCDH-202ENST00000421816 SNURFQ9Y675 71 aa8.85□□□□□ -0.99
GCDH-202ENST00000421816 SSPOA2VEC9 5147 aa8.81□□□□□ -1
GCDH-202ENST00000421816 C20orf197Q8N268 126 aa8.81□□□□□ -1
GCDH-202ENST00000421816 H0YAA0 97 aa8.8□□□□□ -1
GCDH-202ENST00000421816 KRTAP19-1Q8IUB9 90 aa8.8□□□□□ -1
GCDH-202ENST00000421816 ACYP2P14621 99 aa8.75□□□□□ -1.01
GCDH-202ENST00000421816 SPRR2GQ9BYE4 73 aa8.73□□□□□ -1.01
GCDH-202ENST00000421816 SPANXA2-OT1Q8N9U9 137 aa8.72□□□□□ -1.01
GCDH-202ENST00000421816 COX7CP15954 63 aa8.71□□□□□ -1.02
GCDH-202ENST00000421816 CRIPTQ9P021 101 aa8.7□□□□□ -1.02
GCDH-202ENST00000421816 ADM2Q7Z4H4 148 aa8.68□□□□□ -1.02
GCDH-202ENST00000421816 KRTAP19-6Q3LI70 58 aa8.64□□□□□ -1.03
GCDH-202ENST00000421816 KRTAP19-8Q3LI54 63 aa8.63□□□□□ -1.03
GCDH-202ENST00000421816 MT1BP07438 61 aa8.59□□□□□ -1.03
GCDH-202ENST00000421816 FCGBPQ9Y6R7 5405 aaPredicted RBP8.58□□□□□ -1.04
GCDH-202ENST00000421816 Q5VV11 94 aa8.57□□□□□ -1.04
GCDH-202ENST00000421816 SPTSSBQ8NFR3 76 aa8.57□□□□□ -1.04
GCDH-202ENST00000421816 CHKB-CPT1BH3BT56 60 aa8.56□□□□□ -1.04
GCDH-202ENST00000421816 KRTAP3-2Q9BYR7 98 aa8.55□□□□□ -1.04
GCDH-202ENST00000421816 P0C880 135 aa8.54□□□□□ -1.04
GCDH-202ENST00000421816 ANAPC13Q9BS18 74 aa8.54□□□□□ -1.04
GCDH-202ENST00000421816 CYSTM1Q9H1C7 97 aa8.53□□□□□ -1.04
GCDH-202ENST00000421816 H7BZZ5 65 aa8.51□□□□□ -1.05
GCDH-202ENST00000421816 COA5Q86WW8 74 aa8.43□□□□□ -1.06
GCDH-202ENST00000421816 R4GN34 69 aa8.42□□□□□ -1.06
GCDH-202ENST00000421816 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.41□□□□□ -1.06
GCDH-202ENST00000421816 CCDC179H3BU77 68 aa8.38□□□□□ -1.07
GCDH-202ENST00000421816 M0QZ58 72 aa8.37□□□□□ -1.07
GCDH-202ENST00000421816 A6NN06 94 aa8.32□□□□□ -1.08
GCDH-202ENST00000421816 KRTAP10-5P60370 271 aa8.32□□□□□ -1.08
GCDH-202ENST00000421816 PLAC4Q8WY50 150 aa8.23□□□□□ -1.09
GCDH-202ENST00000421816 LINC01554Q52M75 96 aa8.21□□□□□ -1.1
GCDH-202ENST00000421816 KRTAP9-7A8MTY7 169 aa8.2□□□□□ -1.1
GCDH-202ENST00000421816 MACF1Q9UPN3 7388 aaKnown RBP8.2□□□□□ -1.1
GCDH-202ENST00000421816 ATP5EP56381 51 aaPredicted RBP8.19□□□□□ -1.1
GCDH-202ENST00000421816 SEC61GP60059 68 aa8.14□□□□□ -1.11
GCDH-202ENST00000421816 MT1XP80297 61 aa8.12□□□□□ -1.11
GCDH-202ENST00000421816 KRTAP13-4Q3LI77 160 aa8.12□□□□□ -1.11
GCDH-202ENST00000421816 SERP1Q9Y6X1 66 aa8.12□□□□□ -1.11
GCDH-202ENST00000421816 TMEM258P61165 79 aa8.09□□□□□ -1.11
GCDH-202ENST00000421816 PRO2289Q9P1D8 64 aa8.09□□□□□ -1.11
GCDH-202ENST00000421816 SYNE2Q8WXH0 6885 aaKnown RBP8.04□□□□□ -1.12
GCDH-202ENST00000421816 A0A1B0GU33 70 aa8□□□□□ -1.13
GCDH-202ENST00000421816 KRTAP6-3Q3LI67 103 aa7.99□□□□□ -1.13
GCDH-202ENST00000421816 A0A1B0GU69 56 aa7.98□□□□□ -1.13
GCDH-202ENST00000421816 SPATA8Q6RVD6 105 aa7.93□□□□□ -1.14
GCDH-202ENST00000421816 KRTAP12-2P59991 146 aa7.88□□□□□ -1.15
GCDH-202ENST00000421816 LINC01558Q9Y6Z2 57 aa7.87□□□□□ -1.15
GCDH-202ENST00000421816 A0A0D9SG42 100 aa7.86□□□□□ -1.15
GCDH-202ENST00000421816 PRR15LQ9BU68 103 aa7.83□□□□□ -1.16
GCDH-202ENST00000421816 CAMK2N1Q7Z7J9 78 aa7.78□□□□□ -1.16
GCDH-202ENST00000421816 KRTAP5-9P26371 169 aa7.77□□□□□ -1.17
GCDH-202ENST00000421816 SMIM26A0A096LP01 95 aa7.76□□□□□ -1.17
GCDH-202ENST00000421816 KRTAP12-1P59990 96 aa7.75□□□□□ -1.17
GCDH-202ENST00000421816 KRTAP10-7P60409 375 aaPredicted RBP7.75□□□□□ -1.17
GCDH-202ENST00000421816 KRTAP10-12P60413 245 aa7.73□□□□□ -1.17
GCDH-202ENST00000421816 SPINT4Q6UDR6 99 aa7.73□□□□□ -1.17
GCDH-202ENST00000421816 KMT2DO14686 5537 aa7.72□□□□□ -1.17
GCDH-202ENST00000421816 A8MU10 97 aa7.7□□□□□ -1.18
GCDH-202ENST00000421816 PCP4P48539 62 aa7.66□□□□□ -1.18
GCDH-202ENST00000421816 KRTAP8-1Q8IUC2 63 aa7.66□□□□□ -1.18
GCDH-202ENST00000421816 KRTAP4-8A0A0G2JLE6 195 aa7.65□□□□□ -1.18
GCDH-202ENST00000421816 KRTAP4-8Q9BYQ9 185 aa7.65□□□□□ -1.18
GCDH-202ENST00000421816 MUC12Q9UKN1 5478 aa7.6□□□□□ -1.19
GCDH-202ENST00000421816 UQCR11O14957 56 aa7.59□□□□□ -1.19
GCDH-202ENST00000421816 V9GYY9 64 aa7.58□□□□□ -1.2
GCDH-202ENST00000421816 Q1T7F1 81 aa7.57□□□□□ -1.2
GCDH-202ENST00000421816 SPRR2FQ96RM1 72 aa7.57□□□□□ -1.2
GCDH-202ENST00000421816 NEBP20929 6669 aa7.54□□□□□ -1.2
GCDH-202ENST00000421816 MDN1Q9NU22 5596 aa7.48□□□□□ -1.21
GCDH-202ENST00000421816 PSPHP1O15172 72 aa7.47□□□□□ -1.21
GCDH-202ENST00000421816 RPS28P62857 69 aaKnown RBP7.47□□□□□ -1.21
GCDH-202ENST00000421816 MIR22HGQ0VDD5 57 aa7.44□□□□□ -1.22
GCDH-202ENST00000421816 SPRR2EP22531 72 aa7.39□□□□□ -1.23
GCDH-202ENST00000421816 SPRR2BP35325 72 aa7.39□□□□□ -1.23
GCDH-202ENST00000421816 SPRR2AP35326 72 aa7.39□□□□□ -1.23
GCDH-202ENST00000421816 C10orf95Q9H7T3 257 aa7.39□□□□□ -1.23
GCDH-202ENST00000421816 LCE1AQ5T7P2 110 aa7.36□□□□□ -1.23
GCDH-202ENST00000421816 TNP1P09430 55 aa7.28□□□□□ -1.24
GCDH-202ENST00000421816 KRTAP19-7Q3SYF9 63 aa7.27□□□□□ -1.25
GCDH-202ENST00000421816 A6NED7 52 aa7.23□□□□□ -1.25
GCDH-202ENST00000421816 K7ERS5 55 aa7.22□□□□□ -1.25
GCDH-202ENST00000421816 KRTAP20-1Q3LI63 56 aa7.22□□□□□ -1.25
GCDH-202ENST00000421816 MT1EP04732 61 aa7.18□□□□□ -1.26
GCDH-202ENST00000421816 KRTAP19-5Q3LI72 72 aa7.15□□□□□ -1.26
GCDH-202ENST00000421816 LCE3AQ5TA76 89 aa7.15□□□□□ -1.26
GCDH-202ENST00000421816 KRTAP2-3P0C7H8 128 aa7.14□□□□□ -1.27
GCDH-202ENST00000421816 SPRR2DP22532 72 aa7.14□□□□□ -1.27
GCDH-202ENST00000421816 KRTAP2-4Q9BYR9 128 aa7.14□□□□□ -1.27
GCDH-202ENST00000421816 KRTAP25-1Q3LHN0 102 aa7.05□□□□□ -1.28
GCDH-202ENST00000421816 KRTAP19-3Q7Z4W3 81 aa7.05□□□□□ -1.28
GCDH-202ENST00000421816 LCE5AQ5TCM9 118 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms