RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 MT1HP80294 61 aa10.52□□□□□ -0.73
ABCF3-202ENST00000421340 LCA10Q71F78 164 aa10.5□□□□□ -0.73
ABCF3-202ENST00000421340 COA5Q86WW8 74 aa10.48□□□□□ -0.73
ABCF3-202ENST00000421340 KRTAP3-3Q9BYR6 98 aa10.46□□□□□ -0.73
ABCF3-202ENST00000421340 CHKB-CPT1BH3BT56 60 aa10.45□□□□□ -0.74
ABCF3-202ENST00000421340 CSAG1Q6PB30 78 aa10.42□□□□□ -0.74
ABCF3-202ENST00000421340 SPTSSBQ8NFR3 76 aa10.4□□□□□ -0.74
ABCF3-202ENST00000421340 M0R2T5 61 aa10.38□□□□□ -0.75
ABCF3-202ENST00000421340 LCE2AQ5TA79 106 aaPredicted RBP10.38□□□□□ -0.75
ABCF3-202ENST00000421340 SERP1Q9Y6X1 66 aa10.37□□□□□ -0.75
ABCF3-202ENST00000421340 RPS28P62857 69 aaKnown RBP10.25□□□□□ -0.77
ABCF3-202ENST00000421340 H0YAA0 97 aa10.2□□□□□ -0.78
ABCF3-202ENST00000421340 KRTAP10-6P60371 365 aaPredicted RBP10.2□□□□□ -0.78
ABCF3-202ENST00000421340 LORP23490 312 aaPredicted RBP10.16□□□□□ -0.78
ABCF3-202ENST00000421340 KRTAP9-8Q9BYQ0 159 aa10.1□□□□□ -0.79
ABCF3-202ENST00000421340 SMIM26A0A096LP01 95 aa10.05□□□□□ -0.8
ABCF3-202ENST00000421340 ADM2Q7Z4H4 148 aa10.04□□□□□ -0.8
ABCF3-202ENST00000421340 MT2AP02795 61 aa10.02□□□□□ -0.81
ABCF3-202ENST00000421340 SEC61GP60059 68 aa10.01□□□□□ -0.81
ABCF3-202ENST00000421340 KRTAP3-2Q9BYR7 98 aa10.01□□□□□ -0.81
ABCF3-202ENST00000421340 LINC01558Q9Y6Z2 57 aa10.01□□□□□ -0.81
ABCF3-202ENST00000421340 V9GYY9 64 aa9.98□□□□□ -0.81
ABCF3-202ENST00000421340 Q1T7F1 81 aa9.95□□□□□ -0.82
ABCF3-202ENST00000421340 MT1FP04733 61 aa9.94□□□□□ -0.82
ABCF3-202ENST00000421340 A0A1B0GU69 56 aa9.93□□□□□ -0.82
ABCF3-202ENST00000421340 KRTAP10-10P60014 251 aa9.93□□□□□ -0.82
ABCF3-202ENST00000421340 P0C880 135 aa9.91□□□□□ -0.82
ABCF3-202ENST00000421340 PRR15LQ9BU68 103 aa9.9□□□□□ -0.82
ABCF3-202ENST00000421340 CRIPTQ9P021 101 aa9.9□□□□□ -0.82
ABCF3-202ENST00000421340 KRTAP9-3Q9BYQ3 159 aa9.77□□□□□ -0.85
ABCF3-202ENST00000421340 A0A1B0GU33 70 aa9.75□□□□□ -0.85
ABCF3-202ENST00000421340 M0QZ58 72 aa9.74□□□□□ -0.85
ABCF3-202ENST00000421340 R4GN34 69 aa9.73□□□□□ -0.85
ABCF3-202ENST00000421340 SPRR2GQ9BYE4 73 aa9.71□□□□□ -0.86
ABCF3-202ENST00000421340 PSPHP1O15172 72 aa9.7□□□□□ -0.86
ABCF3-202ENST00000421340 KRTAP19-1Q8IUB9 90 aa9.67□□□□□ -0.86
ABCF3-202ENST00000421340 Q5VV11 94 aa9.65□□□□□ -0.86
ABCF3-202ENST00000421340 LCE2DQ5TA82 110 aaPredicted RBP9.61□□□□□ -0.87
ABCF3-202ENST00000421340 UQCR11O14957 56 aa9.6□□□□□ -0.87
ABCF3-202ENST00000421340 KRTAP13-4Q3LI77 160 aa9.59□□□□□ -0.87
ABCF3-202ENST00000421340 SPATA8Q6RVD6 105 aa9.53□□□□□ -0.88
ABCF3-202ENST00000421340 KRTAP19-8Q3LI54 63 aa9.51□□□□□ -0.89
ABCF3-202ENST00000421340 LCE2BO14633 110 aa9.5□□□□□ -0.89
ABCF3-202ENST00000421340 LINC01554Q52M75 96 aa9.45□□□□□ -0.9
ABCF3-202ENST00000421340 A6NN06 94 aa9.44□□□□□ -0.9
ABCF3-202ENST00000421340 A6NED7 52 aa9.43□□□□□ -0.9
ABCF3-202ENST00000421340 MIR22HGQ0VDD5 57 aa9.43□□□□□ -0.9
ABCF3-202ENST00000421340 A0A0D9SG42 100 aa9.36□□□□□ -0.91
ABCF3-202ENST00000421340 MT1BP07438 61 aa9.36□□□□□ -0.91
ABCF3-202ENST00000421340 A8MU10 97 aa9.34□□□□□ -0.91
ABCF3-202ENST00000421340 KRTAP9-2Q9BYQ4 174 aa9.32□□□□□ -0.92
ABCF3-202ENST00000421340 PLAC4Q8WY50 150 aa9.31□□□□□ -0.92
ABCF3-202ENST00000421340 CDC42SE1Q9NRR8 79 aa9.26□□□□□ -0.93
ABCF3-202ENST00000421340 KRTAP12-1P59990 96 aa9.25□□□□□ -0.93
ABCF3-202ENST00000421340 USH2AO75445 5202 aa9.25□□□□□ -0.93
ABCF3-202ENST00000421340 SPINT4Q6UDR6 99 aa9.2□□□□□ -0.94
ABCF3-202ENST00000421340 KRTAP12-2P59991 146 aa9.18□□□□□ -0.94
ABCF3-202ENST00000421340 K7ERS5 55 aa9.11□□□□□ -0.95
ABCF3-202ENST00000421340 KRTAP19-6Q3LI70 58 aa9.07□□□□□ -0.96
ABCF3-202ENST00000421340 CAMK2N1Q7Z7J9 78 aa9.06□□□□□ -0.96
ABCF3-202ENST00000421340 BRK1Q8WUW1 75 aa9.04□□□□□ -0.96
ABCF3-202ENST00000421340 KRTAP10-5P60370 271 aa8.99□□□□□ -0.97
ABCF3-202ENST00000421340 PRO2289Q9P1D8 64 aa8.99□□□□□ -0.97
ABCF3-202ENST00000421340 MT1XP80297 61 aa8.98□□□□□ -0.97
ABCF3-202ENST00000421340 SSPOA2VEC9 5147 aa8.98□□□□□ -0.97
ABCF3-202ENST00000421340 CRCT1Q9UGL9 99 aa8.97□□□□□ -0.97
ABCF3-202ENST00000421340 FSIP2Q5CZC0 6907 aa8.93□□□□□ -0.98
ABCF3-202ENST00000421340 C10orf95Q9H7T3 257 aa8.77□□□□□ -1.01
ABCF3-202ENST00000421340 KRTAP9-6A0A140TA67 174 aa8.74□□□□□ -1.01
ABCF3-202ENST00000421340 PRO0628Q9UI54 55 aa8.74□□□□□ -1.01
ABCF3-202ENST00000421340 FCGBPQ9Y6R7 5405 aaPredicted RBP8.68□□□□□ -1.02
ABCF3-202ENST00000421340 ROMO1P60602 79 aa8.66□□□□□ -1.02
ABCF3-202ENST00000421340 TNP1P09430 55 aa8.6□□□□□ -1.03
ABCF3-202ENST00000421340 PMAIP1Q13794 54 aa8.59□□□□□ -1.03
ABCF3-202ENST00000421340 KRTAP10-12P60413 245 aa8.57□□□□□ -1.04
ABCF3-202ENST00000421340 KRTAP10-7P60409 375 aaPredicted RBP8.56□□□□□ -1.04
ABCF3-202ENST00000421340 KRTAP25-1Q3LHN0 102 aa8.55□□□□□ -1.04
ABCF3-202ENST00000421340 KRTAP23-1A1A580 65 aa8.33□□□□□ -1.08
ABCF3-202ENST00000421340 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.3□□□□□ -1.08
ABCF3-202ENST00000421340 KRTAP4-8A0A0G2JLE6 195 aa8.29□□□□□ -1.08
ABCF3-202ENST00000421340 KRTAP4-8Q9BYQ9 185 aa8.29□□□□□ -1.08
ABCF3-202ENST00000421340 MACF1Q9UPN3 7388 aaKnown RBP8.25□□□□□ -1.09
ABCF3-202ENST00000421340 LCE3AQ5TA76 89 aa8.24□□□□□ -1.09
ABCF3-202ENST00000421340 PP632Q6XCG6 107 aa8.21□□□□□ -1.1
ABCF3-202ENST00000421340 KRTAP8-1Q8IUC2 63 aa8.21□□□□□ -1.1
ABCF3-202ENST00000421340 KMT2DO14686 5537 aa8.13□□□□□ -1.11
ABCF3-202ENST00000421340 KTN1-AS1Q86SY8 53 aa8.12□□□□□ -1.11
ABCF3-202ENST00000421340 KRTAP6-3Q3LI67 103 aa8.08□□□□□ -1.12
ABCF3-202ENST00000421340 KRTAP5-9P26371 169 aa8.05□□□□□ -1.12
ABCF3-202ENST00000421340 SYNE2Q8WXH0 6885 aaKnown RBP8.02□□□□□ -1.13
ABCF3-202ENST00000421340 KRTAP19-5Q3LI72 72 aa8.02□□□□□ -1.13
ABCF3-202ENST00000421340 KRTAP19-7Q3SYF9 63 aa8.02□□□□□ -1.13
ABCF3-202ENST00000421340 PRAC1Q96KF2 57 aa7.99□□□□□ -1.13
ABCF3-202ENST00000421340 KRTAP12-3P60328 96 aa7.96□□□□□ -1.14
ABCF3-202ENST00000421340 KRTAP9-7A8MTY7 169 aa7.95□□□□□ -1.14
ABCF3-202ENST00000421340 SPRR2FQ96RM1 72 aa7.95□□□□□ -1.14
ABCF3-202ENST00000421340 MT1EP04732 61 aa7.91□□□□□ -1.14
ABCF3-202ENST00000421340 KRTAP15-1Q3LI76 137 aa7.73□□□□□ -1.17
ABCF3-202ENST00000421340 MT1LQ93083 61 aa7.7□□□□□ -1.18
ABCF3-202ENST00000421340 KRTAP19-4Q3LI73 84 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms