RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 KRTAP3-2Q9BYR7 98 aa9.71□□□□□ -0.86
HMGXB4-203ENST00000420166 KRTAP9-3Q9BYQ3 159 aa9.7□□□□□ -0.86
HMGXB4-203ENST00000420166 FSIP2Q5CZC0 6907 aa9.65□□□□□ -0.86
HMGXB4-203ENST00000420166 CRCT1Q9UGL9 99 aa9.63□□□□□ -0.87
HMGXB4-203ENST00000420166 SERP2Q8N6R1 65 aa9.58□□□□□ -0.88
HMGXB4-203ENST00000420166 DMAC1Q96GE9 116 aa9.58□□□□□ -0.88
HMGXB4-203ENST00000420166 LCE2BO14633 110 aa9.57□□□□□ -0.88
HMGXB4-203ENST00000420166 NDUFC1O43677 76 aa9.57□□□□□ -0.88
HMGXB4-203ENST00000420166 SNURFQ9Y675 71 aa9.53□□□□□ -0.88
HMGXB4-203ENST00000420166 USH2AO75445 5202 aa9.53□□□□□ -0.88
HMGXB4-203ENST00000420166 C20orf197Q8N268 126 aa9.5□□□□□ -0.89
HMGXB4-203ENST00000420166 H0YAA0 97 aa9.4□□□□□ -0.9
HMGXB4-203ENST00000420166 ACYP2P14621 99 aa9.4□□□□□ -0.9
HMGXB4-203ENST00000420166 COX7CP15954 63 aa9.38□□□□□ -0.91
HMGXB4-203ENST00000420166 KRTAP19-1Q8IUB9 90 aa9.37□□□□□ -0.91
HMGXB4-203ENST00000420166 SPANXA2-OT1Q8N9U9 137 aa9.36□□□□□ -0.91
HMGXB4-203ENST00000420166 SSPOA2VEC9 5147 aa9.35□□□□□ -0.91
HMGXB4-203ENST00000420166 ADM2Q7Z4H4 148 aa9.3□□□□□ -0.92
HMGXB4-203ENST00000420166 SPRR2GQ9BYE4 73 aa9.3□□□□□ -0.92
HMGXB4-203ENST00000420166 CRIPTQ9P021 101 aa9.28□□□□□ -0.92
HMGXB4-203ENST00000420166 ANAPC13Q9BS18 74 aa9.25□□□□□ -0.93
HMGXB4-203ENST00000420166 CHKB-CPT1BH3BT56 60 aa9.23□□□□□ -0.93
HMGXB4-203ENST00000420166 SPTSSBQ8NFR3 76 aa9.22□□□□□ -0.93
HMGXB4-203ENST00000420166 KRTAP19-8Q3LI54 63 aa9.2□□□□□ -0.94
HMGXB4-203ENST00000420166 CYSTM1Q9H1C7 97 aa9.19□□□□□ -0.94
HMGXB4-203ENST00000420166 KRTAP19-6Q3LI70 58 aa9.18□□□□□ -0.94
HMGXB4-203ENST00000420166 H7BZZ5 65 aa9.17□□□□□ -0.94
HMGXB4-203ENST00000420166 Q5VV11 94 aa9.16□□□□□ -0.94
HMGXB4-203ENST00000420166 MT1BP07438 61 aa9.15□□□□□ -0.94
HMGXB4-203ENST00000420166 P0C880 135 aa9.15□□□□□ -0.94
HMGXB4-203ENST00000420166 FCGBPQ9Y6R7 5405 aaPredicted RBP9.11□□□□□ -0.95
HMGXB4-203ENST00000420166 COA5Q86WW8 74 aa9.08□□□□□ -0.96
HMGXB4-203ENST00000420166 KRTAP9-7A8MTY7 169 aa9.06□□□□□ -0.96
HMGXB4-203ENST00000420166 CCDC179H3BU77 68 aa9.05□□□□□ -0.96
HMGXB4-203ENST00000420166 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.04□□□□□ -0.96
HMGXB4-203ENST00000420166 R4GN34 69 aa9.03□□□□□ -0.96
HMGXB4-203ENST00000420166 M0QZ58 72 aa8.99□□□□□ -0.97
HMGXB4-203ENST00000420166 A6NN06 94 aa8.89□□□□□ -0.99
HMGXB4-203ENST00000420166 KRTAP10-5P60370 271 aa8.86□□□□□ -0.99
HMGXB4-203ENST00000420166 ATP5EP56381 51 aaPredicted RBP8.84□□□□□ -0.99
HMGXB4-203ENST00000420166 LINC01554Q52M75 96 aa8.83□□□□□ -1
HMGXB4-203ENST00000420166 PLAC4Q8WY50 150 aa8.81□□□□□ -1
HMGXB4-203ENST00000420166 SEC61GP60059 68 aa8.76□□□□□ -1.01
HMGXB4-203ENST00000420166 TMEM258P61165 79 aa8.74□□□□□ -1.01
HMGXB4-203ENST00000420166 SERP1Q9Y6X1 66 aa8.74□□□□□ -1.01
HMGXB4-203ENST00000420166 KRTAP13-4Q3LI77 160 aa8.7□□□□□ -1.02
HMGXB4-203ENST00000420166 MT1XP80297 61 aa8.67□□□□□ -1.02
HMGXB4-203ENST00000420166 MACF1Q9UPN3 7388 aaKnown RBP8.67□□□□□ -1.02
HMGXB4-203ENST00000420166 PRO2289Q9P1D8 64 aa8.66□□□□□ -1.02
HMGXB4-203ENST00000420166 SYNE2Q8WXH0 6885 aaKnown RBP8.63□□□□□ -1.03
HMGXB4-203ENST00000420166 A0A1B0GU69 56 aa8.6□□□□□ -1.03
HMGXB4-203ENST00000420166 A0A1B0GU33 70 aa8.59□□□□□ -1.03
HMGXB4-203ENST00000420166 SPATA8Q6RVD6 105 aa8.52□□□□□ -1.05
HMGXB4-203ENST00000420166 KRTAP6-3Q3LI67 103 aa8.47□□□□□ -1.05
HMGXB4-203ENST00000420166 LINC01558Q9Y6Z2 57 aa8.47□□□□□ -1.05
HMGXB4-203ENST00000420166 A0A0D9SG42 100 aa8.46□□□□□ -1.06
HMGXB4-203ENST00000420166 PRR15LQ9BU68 103 aa8.45□□□□□ -1.06
HMGXB4-203ENST00000420166 KRTAP12-2P59991 146 aa8.38□□□□□ -1.07
HMGXB4-203ENST00000420166 CAMK2N1Q7Z7J9 78 aa8.37□□□□□ -1.07
HMGXB4-203ENST00000420166 SMIM26A0A096LP01 95 aa8.34□□□□□ -1.07
HMGXB4-203ENST00000420166 PCP4P48539 62 aa8.32□□□□□ -1.08
HMGXB4-203ENST00000420166 KRTAP12-1P59990 96 aa8.32□□□□□ -1.08
HMGXB4-203ENST00000420166 SPINT4Q6UDR6 99 aa8.31□□□□□ -1.08
HMGXB4-203ENST00000420166 A8MU10 97 aa8.28□□□□□ -1.08
HMGXB4-203ENST00000420166 KRTAP10-7P60409 375 aaPredicted RBP8.27□□□□□ -1.09
HMGXB4-203ENST00000420166 KRTAP5-9P26371 169 aa8.24□□□□□ -1.09
HMGXB4-203ENST00000420166 KRTAP10-12P60413 245 aa8.23□□□□□ -1.09
HMGXB4-203ENST00000420166 NEBP20929 6669 aa8.22□□□□□ -1.09
HMGXB4-203ENST00000420166 KMT2DO14686 5537 aa8.2□□□□□ -1.1
HMGXB4-203ENST00000420166 UQCR11O14957 56 aa8.18□□□□□ -1.1
HMGXB4-203ENST00000420166 V9GYY9 64 aa8.18□□□□□ -1.1
HMGXB4-203ENST00000420166 KRTAP8-1Q8IUC2 63 aa8.17□□□□□ -1.1
HMGXB4-203ENST00000420166 KRTAP4-8A0A0G2JLE6 195 aa8.15□□□□□ -1.1
HMGXB4-203ENST00000420166 Q1T7F1 81 aa8.15□□□□□ -1.1
HMGXB4-203ENST00000420166 KRTAP4-8Q9BYQ9 185 aa8.15□□□□□ -1.1
HMGXB4-203ENST00000420166 PSPHP1O15172 72 aa8.08□□□□□ -1.12
HMGXB4-203ENST00000420166 SPRR2FQ96RM1 72 aa8.08□□□□□ -1.12
HMGXB4-203ENST00000420166 MUC12Q9UKN1 5478 aa8.06□□□□□ -1.12
HMGXB4-203ENST00000420166 RPS28P62857 69 aaKnown RBP8.05□□□□□ -1.12
HMGXB4-203ENST00000420166 MIR22HGQ0VDD5 57 aa8.02□□□□□ -1.13
HMGXB4-203ENST00000420166 MDN1Q9NU22 5596 aa7.92□□□□□ -1.14
HMGXB4-203ENST00000420166 C10orf95Q9H7T3 257 aa7.92□□□□□ -1.14
HMGXB4-203ENST00000420166 SPRR2EP22531 72 aa7.88□□□□□ -1.15
HMGXB4-203ENST00000420166 SPRR2BP35325 72 aa7.88□□□□□ -1.15
HMGXB4-203ENST00000420166 SPRR2AP35326 72 aa7.88□□□□□ -1.15
HMGXB4-203ENST00000420166 KRTAP20-1Q3LI63 56 aa7.88□□□□□ -1.15
HMGXB4-203ENST00000420166 A6NED7 52 aa7.83□□□□□ -1.16
HMGXB4-203ENST00000420166 LCE1AQ5T7P2 110 aa7.82□□□□□ -1.16
HMGXB4-203ENST00000420166 TNP1P09430 55 aa7.81□□□□□ -1.16
HMGXB4-203ENST00000420166 K7ERS5 55 aa7.8□□□□□ -1.16
HMGXB4-203ENST00000420166 KRTAP19-7Q3SYF9 63 aa7.74□□□□□ -1.17
HMGXB4-203ENST00000420166 MT1EP04732 61 aa7.65□□□□□ -1.18
HMGXB4-203ENST00000420166 LCE3AQ5TA76 89 aa7.65□□□□□ -1.18
HMGXB4-203ENST00000420166 KRTAP19-5Q3LI72 72 aa7.64□□□□□ -1.19
HMGXB4-203ENST00000420166 SPRR2DP22532 72 aa7.61□□□□□ -1.19
HMGXB4-203ENST00000420166 KRTAP2-3P0C7H8 128 aa7.57□□□□□ -1.2
HMGXB4-203ENST00000420166 KRTAP25-1Q3LHN0 102 aa7.57□□□□□ -1.2
HMGXB4-203ENST00000420166 KRTAP2-4Q9BYR9 128 aa7.57□□□□□ -1.2
HMGXB4-203ENST00000420166 CDC42SE1Q9NRR8 79 aa7.56□□□□□ -1.2
HMGXB4-203ENST00000420166 KRTAP19-3Q7Z4W3 81 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms